| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965647
Identifier: 123965647
GI number: 123965647
Start: 372689
End: 373156
Strand: Direct
Name: 123965647
Synonym: P9515_04121
Alternate gene names: NA
Gene position: 372689-373156 (Clockwise)
Preceding gene: 123965646
Following gene: 123965648
Centisome position: 21.87
GC content: 28.85
Gene sequence:
>468_bases ATGAAATTATTTGATTTTTTTTTCAAAAATTTGAATAAAAGAGCAGAAATTATTTCGGAAGAATCACTTGATAATTCAAA TGATCTTTGGGCTGATTCTGTAACAACTGGTTGGGAATATACCTGTAATTTATCATTAACAACTCCAAAAATTTGTATTG TAAATGATGGTTTTATTACTAACGATACATCAGTCAAACCAAAGTTAATAGGAGAACCAAACAATTTTGGAAAAGATGGA GACCCCTCAGGTGATTTTGGTTCTTGGATAAGAAGGCATGGACATGAAGAGGAATTTGAAGAATTGGCAAATATTTCTCA AGATATGATTTATGCAAGACCAACTGATATTGGAAGAATCCCACCGAAATCAAAATTAGAAGTTGATTTTAAAAGTTTTT TAATCGATTTTAGAAGTATAGTTGAGTCCAATATTTCTGTAGAAAAAAAAATTATTTATGATAAATGA
Upstream 100 bases:
>100_bases AAGAAGAAAAGAATAAAAAAGAAGTAAAAATTTCTTTTTTTAAAAAAATAAAGAGCCTTTTTAATAATTCTTGAATCATA TTATTTTCTTTGATAGATAG
Downstream 100 bases:
>100_bases GGAACTAAGTATTAAATCACAAGCTTATAAAGATATTTATAAAAAATTAGTAAGGGAAAAGAAATTTCCTGATTCTTTCT TTATCAATATTTTGTGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKLFDFFFKNLNKRAEIISEESLDNSNDLWADSVTTGWEYTCNLSLTTPKICIVNDGFITNDTSVKPKLIGEPNNFGKDG DPSGDFGSWIRRHGHEEEFEELANISQDMIYARPTDIGRIPPKSKLEVDFKSFLIDFRSIVESNISVEKKIIYDK
Sequences:
>Translated_155_residues MKLFDFFFKNLNKRAEIISEESLDNSNDLWADSVTTGWEYTCNLSLTTPKICIVNDGFITNDTSVKPKLIGEPNNFGKDG DPSGDFGSWIRRHGHEEEFEELANISQDMIYARPTDIGRIPPKSKLEVDFKSFLIDFRSIVESNISVEKKIIYDK >Mature_155_residues MKLFDFFFKNLNKRAEIISEESLDNSNDLWADSVTTGWEYTCNLSLTTPKICIVNDGFITNDTSVKPKLIGEPNNFGKDG DPSGDFGSWIRRHGHEEEFEELANISQDMIYARPTDIGRIPPKSKLEVDFKSFLIDFRSIVESNISVEKKIIYDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17747; Mature: 17747
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFDFFFKNLNKRAEIISEESLDNSNDLWADSVTTGWEYTCNLSLTTPKICIVNDGFIT CCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCEEC NDTSVKPKLIGEPNNFGKDGDPSGDFGSWIRRHGHEEEFEELANISQDMIYARPTDIGRI CCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCC PPKSKLEVDFKSFLIDFRSIVESNISVEKKIIYDK CCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCC >Mature Secondary Structure MKLFDFFFKNLNKRAEIISEESLDNSNDLWADSVTTGWEYTCNLSLTTPKICIVNDGFIT CCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCEEC NDTSVKPKLIGEPNNFGKDGDPSGDFGSWIRRHGHEEEFEELANISQDMIYARPTDIGRI CCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCC PPKSKLEVDFKSFLIDFRSIVESNISVEKKIIYDK CCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA