| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965640
Identifier: 123965640
GI number: 123965640
Start: 366815
End: 367282
Strand: Direct
Name: 123965640
Synonym: P9515_04051
Alternate gene names: NA
Gene position: 366815-367282 (Clockwise)
Preceding gene: 123965639
Following gene: 123965641
Centisome position: 21.52
GC content: 32.91
Gene sequence:
>468_bases GTGAATTTCGATAAAAATACTTCTGATATTATTAATAAATTCAAATTGTCTATTCACCCGGAGGGCGGATGGTATAGAGA AATCTTCCGAGGTGAAAATTATGTGACAAGAAAAGATGGTCAAAAAAGAACGAATATTACTAGTATTTATTATTTGCTTT GTAAGGGAGAAAATAGTTCTTGGCACCGTGTTAATAATGCTGATGAGATATGGATTTTTCTTCAAGGTTCGCCTCTGAAC TTAAGGTGTTTAGATGAGGATAATAAAAAAATCAAAAATCTAAACTTACATACTAATAATCCAATTGAAATAATTCCAGC AGGATATTGGCAGTGTGCTAGTACAAGTGGAGAATTCACTCTTACGAGTTGTTGCGTTGGCCCAGGATTTGATTTTTTGG ATTTTGAAATGCTAAGAGATCTAGATCCTTCTTTAAGGCCTAGTAAAGCTATGAAGGATTTTATTTAA
Upstream 100 bases:
>100_bases ATTTATATTATCTGGCTTTTCTAAAATAAATATTAATTTTTTAAGAGTTTTAGTTAATGACTTTAAAAATATTAGGATAA GTAAATAAAACTCTTAAAAA
Downstream 100 bases:
>100_bases TAAATTAATTTTTCCTGATTATTTTCTTTTAATGAATAAGGACAATATTAAAATCATTGGCAGAAGACAGATCTCAAGAG AAGAAGCTCTATTTTTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNFDKNTSDIINKFKLSIHPEGGWYREIFRGENYVTRKDGQKRTNITSIYYLLCKGENSSWHRVNNADEIWIFLQGSPLN LRCLDEDNKKIKNLNLHTNNPIEIIPAGYWQCASTSGEFTLTSCCVGPGFDFLDFEMLRDLDPSLRPSKAMKDFI
Sequences:
>Translated_155_residues MNFDKNTSDIINKFKLSIHPEGGWYREIFRGENYVTRKDGQKRTNITSIYYLLCKGENSSWHRVNNADEIWIFLQGSPLN LRCLDEDNKKIKNLNLHTNNPIEIIPAGYWQCASTSGEFTLTSCCVGPGFDFLDFEMLRDLDPSLRPSKAMKDFI >Mature_155_residues MNFDKNTSDIINKFKLSIHPEGGWYREIFRGENYVTRKDGQKRTNITSIYYLLCKGENSSWHRVNNADEIWIFLQGSPLN LRCLDEDNKKIKNLNLHTNNPIEIIPAGYWQCASTSGEFTLTSCCVGPGFDFLDFEMLRDLDPSLRPSKAMKDFI
Specific function: Unknown
COG id: COG3542
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17948; Mature: 17948
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFDKNTSDIINKFKLSIHPEGGWYREIFRGENYVTRKDGQKRTNITSIYYLLCKGENSS CCCCCCHHHHHHEEEEEECCCCCHHHHHHCCCCEEECCCCCCCCCEEEEEEEEEECCCCC WHRVNNADEIWIFLQGSPLNLRCLDEDNKKIKNLNLHTNNPIEIIPAGYWQCASTSGEFT CEEECCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCEE LTSCCVGPGFDFLDFEMLRDLDPSLRPSKAMKDFI EEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHCC >Mature Secondary Structure MNFDKNTSDIINKFKLSIHPEGGWYREIFRGENYVTRKDGQKRTNITSIYYLLCKGENSS CCCCCCHHHHHHEEEEEECCCCCHHHHHHCCCCEEECCCCCCCCCEEEEEEEEEECCCCC WHRVNNADEIWIFLQGSPLNLRCLDEDNKKIKNLNLHTNNPIEIIPAGYWQCASTSGEFT CEEECCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCEE LTSCCVGPGFDFLDFEMLRDLDPSLRPSKAMKDFI EEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA