| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965632
Identifier: 123965632
GI number: 123965632
Start: 360920
End: 361093
Strand: Reverse
Name: 123965632
Synonym: P9515_03971
Alternate gene names: NA
Gene position: 361093-360920 (Counterclockwise)
Preceding gene: 123965633
Following gene: 123965627
Centisome position: 21.19
GC content: 32.18
Gene sequence:
>174_bases ATGTCTAACAGATTTGAATGGGACGACACTAATAGTTCTGGAATTTGGTGGAGTACTAATGTAAGTATTAGAGACGAATG TATCCTGCTTAAAGAGGATACTGAATGTGAAGATTCTGATATTGTTGAATTACTAAGAAGTATTGCTAAAAATATTGAAG ATAATGGTCTCTAA
Upstream 100 bases:
>100_bases GAGTATGCAAGATTTGATATTGAATGGCCAGAAGAAGTCAAGGAAGAAATCAAAGAAAATATAAAGGAGCAAGAAGAAGT CAATATAAAATCGTAGGAAA
Downstream 100 bases:
>100_bases ATATTGATGAAATCATATTAAATAAAGTTTTACCAAAAATTTTATAACTTTTCAACTAATTCTAATAATTTCAATGTGAT TCCCTTTTCACTCATAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MSNRFEWDDTNSSGIWWSTNVSIRDECILLKEDTECEDSDIVELLRSIAKNIEDNGL
Sequences:
>Translated_57_residues MSNRFEWDDTNSSGIWWSTNVSIRDECILLKEDTECEDSDIVELLRSIAKNIEDNGL >Mature_56_residues SNRFEWDDTNSSGIWWSTNVSIRDECILLKEDTECEDSDIVELLRSIAKNIEDNGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6607; Mature: 6476
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRFEWDDTNSSGIWWSTNVSIRDECILLKEDTECEDSDIVELLRSIAKNIEDNGL CCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SNRFEWDDTNSSGIWWSTNVSIRDECILLKEDTECEDSDIVELLRSIAKNIEDNGL CCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA