Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123965612

Identifier: 123965612

GI number: 123965612

Start: 349579

End: 349899

Strand: Direct

Name: 123965612

Synonym: P9515_03771

Alternate gene names: NA

Gene position: 349579-349899 (Clockwise)

Preceding gene: 123965610

Following gene: 123965616

Centisome position: 20.51

GC content: 29.6

Gene sequence:

>321_bases
ATGACTTACTTATTTTTATATGTAGTTGGGTTGGTTTTAATATGGTGGATATATCGTGTCGGTTGGATTGAGGCTTTAAA
AACAGTAATTAAAGTTTTAGTACCTTCAATTTTAATAATTTTATTCAATATTAAAGCTGGAAGATTACTTTTCAAAAATC
CCTTAGTTGGTATAGTGAGTGCTCTTCCCACTTCGATTTTTATTTATAAAGGATCTCTTCCATTAGTTGCATCTATTAAT
AACTGGATTGATACTAAAAGAAGCAATTATGATGAGTCCAAAGACGTAATAGATACAGAATCCGTTCCTTTAGATGATTA
A

Upstream 100 bases:

>100_bases
ATTTTAACTTTTAATAATAACTTTATATTAAAGCCTTAGAAAAAAATTAAATTGCTTCTTTTAAAGACCACTCAACCTAA
ATAAATACTATATTAAAAGC

Downstream 100 bases:

>100_bases
TTAACTTAGCTAATCAAAACCAAGAAATAATTCTTTGTGTACTACAAGAACATCGAATAAAGATGTTCCATGGGTAGGAC
TTATTGGGACTTTATCAACA

Product: helper component proteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MTYLFLYVVGLVLIWWIYRVGWIEALKTVIKVLVPSILIILFNIKAGRLLFKNPLVGIVSALPTSIFIYKGSLPLVASIN
NWIDTKRSNYDESKDVIDTESVPLDD

Sequences:

>Translated_106_residues
MTYLFLYVVGLVLIWWIYRVGWIEALKTVIKVLVPSILIILFNIKAGRLLFKNPLVGIVSALPTSIFIYKGSLPLVASIN
NWIDTKRSNYDESKDVIDTESVPLDD
>Mature_105_residues
TYLFLYVVGLVLIWWIYRVGWIEALKTVIKVLVPSILIILFNIKAGRLLFKNPLVGIVSALPTSIFIYKGSLPLVASINN
WIDTKRSNYDESKDVIDTESVPLDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12041; Mature: 11910

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYLFLYVVGLVLIWWIYRVGWIEALKTVIKVLVPSILIILFNIKAGRLLFKNPLVGIVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHH
ALPTSIFIYKGSLPLVASINNWIDTKRSNYDESKDVIDTESVPLDD
HHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TYLFLYVVGLVLIWWIYRVGWIEALKTVIKVLVPSILIILFNIKAGRLLFKNPLVGIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHH
ALPTSIFIYKGSLPLVASINNWIDTKRSNYDESKDVIDTESVPLDD
HHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA