| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is fdx
Identifier: 123965583
GI number: 123965583
Start: 322176
End: 322538
Strand: Direct
Name: fdx
Synonym: P9515_03481
Alternate gene names: NA
Gene position: 322176-322538 (Clockwise)
Preceding gene: 123965578
Following gene: 123965584
Centisome position: 18.91
GC content: 35.54
Gene sequence:
>363_bases ATGACAACTATCAGATTTATCCGAGAAGGAGTGGACATCAAATGCAAACCTGGAGAAAATTTGAGAGAGTTAGTAATTAA AGAGAAATTACAACTTTATGGATTAAAGGGATTATTAGGCAATTGTGGGGGAGTTGGCCAATGTAGTACTTGCTTTATTT CTTTGGAAGGAGGAACGAAAAATTCGCTTAGTCCTATTACTGCAGTTGAACAGGAAAAACTCAAAAATAGACCTGAAAAC TGGAGGCTTGCTTGTCAAACCCTAATAAGTTCATCTGCGATAATACTCACTAAACCTCAATCTCCTCCACCAAATTTGAA AGAATTGAAAGAATCAGCTGAAAATAAAAAACTACCTAGATAA
Upstream 100 bases:
>100_bases CACAACTGCATTATTAGGGAATTTTCAACAAAAATATGTTAATATTTTGGTCACAATTCTCAAGGTAAAACGCCAAAATA GTTGAAAATAACAAAAAAAA
Downstream 100 bases:
>100_bases ATTGTTTAAGACTGTTAATGAGTTAGTGTAATTTTCCGACTTTTCCACTTAATTTCCATTTAAATGTCTATAGTCATAAT ATTATTGAATTTGTATTTTT
Product: ferredoxin
Products: NA
Alternate protein names: Ferredoxin 2Fe-2S Type; Hydrogenase Component
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTTIRFIREGVDIKCKPGENLRELVIKEKLQLYGLKGLLGNCGGVGQCSTCFISLEGGTKNSLSPITAVEQEKLKNRPEN WRLACQTLISSSAIILTKPQSPPPNLKELKESAENKKLPR
Sequences:
>Translated_120_residues MTTIRFIREGVDIKCKPGENLRELVIKEKLQLYGLKGLLGNCGGVGQCSTCFISLEGGTKNSLSPITAVEQEKLKNRPEN WRLACQTLISSSAIILTKPQSPPPNLKELKESAENKKLPR >Mature_119_residues TTIRFIREGVDIKCKPGENLRELVIKEKLQLYGLKGLLGNCGGVGQCSTCFISLEGGTKNSLSPITAVEQEKLKNRPENW RLACQTLISSSAIILTKPQSPPPNLKELKESAENKKLPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13236; Mature: 13104
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIRFIREGVDIKCKPGENLRELVIKEKLQLYGLKGLLGNCGGVGQCSTCFISLEGGTK CCHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC NSLSPITAVEQEKLKNRPENWRLACQTLISSSAIILTKPQSPPPNLKELKESAENKKLPR CCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TTIRFIREGVDIKCKPGENLRELVIKEKLQLYGLKGLLGNCGGVGQCSTCFISLEGGTK CHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC NSLSPITAVEQEKLKNRPENWRLACQTLISSSAIILTKPQSPPPNLKELKESAENKKLPR CCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA