| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965577
Identifier: 123965577
GI number: 123965577
Start: 314387
End: 314902
Strand: Reverse
Name: 123965577
Synonym: P9515_03421
Alternate gene names: NA
Gene position: 314902-314387 (Counterclockwise)
Preceding gene: 123965579
Following gene: 123965576
Centisome position: 18.48
GC content: 37.79
Gene sequence:
>516_bases ATGGGCATTTGGGCGCCTGTTGGAATATTCGTTCTTAGGGGAGTAAGCATAATTTTACCTGCTCTACCGAGCTCAGCCTA TTCACTTCTGGCTGGCTCCTTATTAGGATTCCAGAAAGGTTACATAACAATTGTCTTTTCTGATATCGTTTTTTGCCAAG CAGCTTTTTTCATAGCAAGATATTTTGGTCGTGGTCCTGTTCGTGGGTTAGTGGGTTCAAAAGCAATGAAAAGAATTGAA AGTTTTAATCAAAACCAATTAGAGGAAAATTTCTTTCTAATGACAGGTCTTCTTATGACTGGACTTTTTGATTTTCTTAG CTACGCAATAGGTATTGGAGGAACTCGATGGAAAATATTCACTCCTGCCTTATTAATAAGCCTTCTAATAAGTGATTCCA TTTTAGTTGCTGTTGGAGCTGGAGTTAGTCAAGGAGCGGGGTTATTTTTAGGAATAGCTCTTCTTGGTATGTTTGCGTTA GCTACTATTTCAGGCTTAGCAAAAAGAAAAATTTAA
Upstream 100 bases:
>100_bases GAAATTCCTTTCAGTAGTTTTTTTTATAGCAATATTTATTGTATTAATTTATTTGATCCAAAATTATGGAATTGATCCTC TTAGGGACAAGGTAGAAAGT
Downstream 100 bases:
>100_bases AAATAAAGAATTCTGAAACCTGAAAAAAGATATAACATTTTTGCAAACAACAACATCTAAAATGACTATTCATGCAAGAA TATAATTCTGTTGATTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MGIWAPVGIFVLRGVSIILPALPSSAYSLLAGSLLGFQKGYITIVFSDIVFCQAAFFIARYFGRGPVRGLVGSKAMKRIE SFNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTPALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFAL ATISGLAKRKI
Sequences:
>Translated_171_residues MGIWAPVGIFVLRGVSIILPALPSSAYSLLAGSLLGFQKGYITIVFSDIVFCQAAFFIARYFGRGPVRGLVGSKAMKRIE SFNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTPALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFAL ATISGLAKRKI >Mature_170_residues GIWAPVGIFVLRGVSIILPALPSSAYSLLAGSLLGFQKGYITIVFSDIVFCQAAFFIARYFGRGPVRGLVGSKAMKRIES FNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTPALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFALA TISGLAKRKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18220; Mature: 18089
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIWAPVGIFVLRGVSIILPALPSSAYSLLAGSLLGFQKGYITIVFSDIVFCQAAFFIAR CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YFGRGPVRGLVGSKAMKRIESFNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIF HHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH TPALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFALATISGLAKRKI HHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GIWAPVGIFVLRGVSIILPALPSSAYSLLAGSLLGFQKGYITIVFSDIVFCQAAFFIAR CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YFGRGPVRGLVGSKAMKRIESFNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIF HHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH TPALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFALATISGLAKRKI HHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA