| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is eda
Identifier: 123965492
GI number: 123965492
Start: 238417
End: 239088
Strand: Reverse
Name: eda
Synonym: P9515_02571
Alternate gene names: NA
Gene position: 239088-238417 (Counterclockwise)
Preceding gene: 123965493
Following gene: 123965489
Centisome position: 14.03
GC content: 23.21
Gene sequence:
>672_bases TTGCAAACTATATCTGATTTTAAAAAATCTGATAATTTAATAAAACATAAAAAAGATTTTTTCTCCAAAAATTTAGAGTC AAAATCTTTTTTTTTATTGATAAAACCTACTAAAAATATATATAAAAATGCTGAAGAAAAAGAATTAGTTGAAAAACAAC TAGAAAAGTTAATAAAAATTGGTTTTTTGAACATTGAAATTAGTTGGTCTGATAATGAAAAATGGTTTGATTATGTTTCC AATCTCAAATTAAAGTTCCCAAAACTTAATTTAGGCTCTGCTTCTATAATTAATAAAAAATCAATAGATGATTCTATTAG ATTAGGATTAAATTATTCAATGATGAAAGTATGGGATAAGGATCTTTTAAATTATTCAAGATCAAAAAACCATCTATTGA TTCCCGGCATTAAAAATTTAAAAGATCTTAAAGAAGCAATAGATTTGCATTGTAAAATTATTAAAATTTATCCAGTAAAA GATAAAAATAAACTAATAAAGATTTCGCAATATAAAAATATAGACTTTATCGCAGCCGGGGGTTTATCAATAGTTGATGT GCCTCTTTATAAATCTTTAGGATATAAAGCTATCGTAATTGGTGATAAGGGCTTTAAAAATAAAGTTATAGACCCAAATA TATATGAATGGATTCAAAAAACATCTAATTAA
Upstream 100 bases:
>100_bases AATAGAAGTGTTCTTGATGAAATGGCTATGATGCTAATCGAGAGAGAAACCATCGACACTGAAGATATTCAAGATTTACT TAACCGCTCTGAGGTGAAAG
Downstream 100 bases:
>100_bases AGAATCATTTCTATTTAATAATTGAACATTGCGCTTGATGAAGAAGCAAATGGTCTGCTAAAACAAGTGCAACCATTGAA TCAACCATTGGTACTGCTCT
Product: 2-keto-3-deoxy-6-phosphogluconate aldolase
Products: pyruvate; D-glyceraldehyde 3-phosphate
Alternate protein names: Aldolase; 2-Keto-3-Deoxy-Phosphogluconate Aldolase
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MQTISDFKKSDNLIKHKKDFFSKNLESKSFFLLIKPTKNIYKNAEEKELVEKQLEKLIKIGFLNIEISWSDNEKWFDYVS NLKLKFPKLNLGSASIINKKSIDDSIRLGLNYSMMKVWDKDLLNYSRSKNHLLIPGIKNLKDLKEAIDLHCKIIKIYPVK DKNKLIKISQYKNIDFIAAGGLSIVDVPLYKSLGYKAIVIGDKGFKNKVIDPNIYEWIQKTSN
Sequences:
>Translated_223_residues MQTISDFKKSDNLIKHKKDFFSKNLESKSFFLLIKPTKNIYKNAEEKELVEKQLEKLIKIGFLNIEISWSDNEKWFDYVS NLKLKFPKLNLGSASIINKKSIDDSIRLGLNYSMMKVWDKDLLNYSRSKNHLLIPGIKNLKDLKEAIDLHCKIIKIYPVK DKNKLIKISQYKNIDFIAAGGLSIVDVPLYKSLGYKAIVIGDKGFKNKVIDPNIYEWIQKTSN >Mature_223_residues MQTISDFKKSDNLIKHKKDFFSKNLESKSFFLLIKPTKNIYKNAEEKELVEKQLEKLIKIGFLNIEISWSDNEKWFDYVS NLKLKFPKLNLGSASIINKKSIDDSIRLGLNYSMMKVWDKDLLNYSRSKNHLLIPGIKNLKDLKEAIDLHCKIIKIYPVK DKNKLIKISQYKNIDFIAAGGLSIVDVPLYKSLGYKAIVIGDKGFKNKVIDPNIYEWIQKTSN
Specific function: Unknown
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.2.14; 4.1.3.16
Molecular weight: Translated: 25893; Mature: 25893
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTISDFKKSDNLIKHKKDFFSKNLESKSFFLLIKPTKNIYKNAEEKELVEKQLEKLIKI CCCHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHH GFLNIEISWSDNEKWFDYVSNLKLKFPKLNLGSASIINKKSIDDSIRLGLNYSMMKVWDK EEEEEEEEECCCCHHHHHHHCCEEECCCCCCCCCHHCCCCCCCCCEEECCCHHHHHHHHH DLLNYSRSKNHLLIPGIKNLKDLKEAIDLHCKIIKIYPVKDKNKLIKISQYKNIDFIAAG HHHHHCCCCCEEECCCCCCHHHHHHHHCCEEEEEEEEECCCCCCEEEEECCCCEEEEEEC GLSIVDVPLYKSLGYKAIVIGDKGFKNKVIDPNIYEWIQKTSN CCEEEEEHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MQTISDFKKSDNLIKHKKDFFSKNLESKSFFLLIKPTKNIYKNAEEKELVEKQLEKLIKI CCCHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHH GFLNIEISWSDNEKWFDYVSNLKLKFPKLNLGSASIINKKSIDDSIRLGLNYSMMKVWDK EEEEEEEEECCCCHHHHHHHCCEEECCCCCCCCCHHCCCCCCCCCEEECCCHHHHHHHHH DLLNYSRSKNHLLIPGIKNLKDLKEAIDLHCKIIKIYPVKDKNKLIKISQYKNIDFIAAG HHHHHCCCCCEEECCCCCCHHHHHHHHCCEEEEEEEEECCCCCCEEEEECCCCEEEEEEC GLSIVDVPLYKSLGYKAIVIGDKGFKNKVIDPNIYEWIQKTSN CCEEEEEHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-dehydro-3-deoxy-D-gluconate 6-phosphate
Specific reaction: 2-dehydro-3-deoxy-D-gluconate 6-phosphate = pyruvate + D-glyceraldehyde 3-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA