Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is eda

Identifier: 123965492

GI number: 123965492

Start: 238417

End: 239088

Strand: Reverse

Name: eda

Synonym: P9515_02571

Alternate gene names: NA

Gene position: 239088-238417 (Counterclockwise)

Preceding gene: 123965493

Following gene: 123965489

Centisome position: 14.03

GC content: 23.21

Gene sequence:

>672_bases
TTGCAAACTATATCTGATTTTAAAAAATCTGATAATTTAATAAAACATAAAAAAGATTTTTTCTCCAAAAATTTAGAGTC
AAAATCTTTTTTTTTATTGATAAAACCTACTAAAAATATATATAAAAATGCTGAAGAAAAAGAATTAGTTGAAAAACAAC
TAGAAAAGTTAATAAAAATTGGTTTTTTGAACATTGAAATTAGTTGGTCTGATAATGAAAAATGGTTTGATTATGTTTCC
AATCTCAAATTAAAGTTCCCAAAACTTAATTTAGGCTCTGCTTCTATAATTAATAAAAAATCAATAGATGATTCTATTAG
ATTAGGATTAAATTATTCAATGATGAAAGTATGGGATAAGGATCTTTTAAATTATTCAAGATCAAAAAACCATCTATTGA
TTCCCGGCATTAAAAATTTAAAAGATCTTAAAGAAGCAATAGATTTGCATTGTAAAATTATTAAAATTTATCCAGTAAAA
GATAAAAATAAACTAATAAAGATTTCGCAATATAAAAATATAGACTTTATCGCAGCCGGGGGTTTATCAATAGTTGATGT
GCCTCTTTATAAATCTTTAGGATATAAAGCTATCGTAATTGGTGATAAGGGCTTTAAAAATAAAGTTATAGACCCAAATA
TATATGAATGGATTCAAAAAACATCTAATTAA

Upstream 100 bases:

>100_bases
AATAGAAGTGTTCTTGATGAAATGGCTATGATGCTAATCGAGAGAGAAACCATCGACACTGAAGATATTCAAGATTTACT
TAACCGCTCTGAGGTGAAAG

Downstream 100 bases:

>100_bases
AGAATCATTTCTATTTAATAATTGAACATTGCGCTTGATGAAGAAGCAAATGGTCTGCTAAAACAAGTGCAACCATTGAA
TCAACCATTGGTACTGCTCT

Product: 2-keto-3-deoxy-6-phosphogluconate aldolase

Products: pyruvate; D-glyceraldehyde 3-phosphate

Alternate protein names: Aldolase; 2-Keto-3-Deoxy-Phosphogluconate Aldolase

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQTISDFKKSDNLIKHKKDFFSKNLESKSFFLLIKPTKNIYKNAEEKELVEKQLEKLIKIGFLNIEISWSDNEKWFDYVS
NLKLKFPKLNLGSASIINKKSIDDSIRLGLNYSMMKVWDKDLLNYSRSKNHLLIPGIKNLKDLKEAIDLHCKIIKIYPVK
DKNKLIKISQYKNIDFIAAGGLSIVDVPLYKSLGYKAIVIGDKGFKNKVIDPNIYEWIQKTSN

Sequences:

>Translated_223_residues
MQTISDFKKSDNLIKHKKDFFSKNLESKSFFLLIKPTKNIYKNAEEKELVEKQLEKLIKIGFLNIEISWSDNEKWFDYVS
NLKLKFPKLNLGSASIINKKSIDDSIRLGLNYSMMKVWDKDLLNYSRSKNHLLIPGIKNLKDLKEAIDLHCKIIKIYPVK
DKNKLIKISQYKNIDFIAAGGLSIVDVPLYKSLGYKAIVIGDKGFKNKVIDPNIYEWIQKTSN
>Mature_223_residues
MQTISDFKKSDNLIKHKKDFFSKNLESKSFFLLIKPTKNIYKNAEEKELVEKQLEKLIKIGFLNIEISWSDNEKWFDYVS
NLKLKFPKLNLGSASIINKKSIDDSIRLGLNYSMMKVWDKDLLNYSRSKNHLLIPGIKNLKDLKEAIDLHCKIIKIYPVK
DKNKLIKISQYKNIDFIAAGGLSIVDVPLYKSLGYKAIVIGDKGFKNKVIDPNIYEWIQKTSN

Specific function: Unknown

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.2.14; 4.1.3.16

Molecular weight: Translated: 25893; Mature: 25893

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTISDFKKSDNLIKHKKDFFSKNLESKSFFLLIKPTKNIYKNAEEKELVEKQLEKLIKI
CCCHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHH
GFLNIEISWSDNEKWFDYVSNLKLKFPKLNLGSASIINKKSIDDSIRLGLNYSMMKVWDK
EEEEEEEEECCCCHHHHHHHCCEEECCCCCCCCCHHCCCCCCCCCEEECCCHHHHHHHHH
DLLNYSRSKNHLLIPGIKNLKDLKEAIDLHCKIIKIYPVKDKNKLIKISQYKNIDFIAAG
HHHHHCCCCCEEECCCCCCHHHHHHHHCCEEEEEEEEECCCCCCEEEEECCCCEEEEEEC
GLSIVDVPLYKSLGYKAIVIGDKGFKNKVIDPNIYEWIQKTSN
CCEEEEEHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MQTISDFKKSDNLIKHKKDFFSKNLESKSFFLLIKPTKNIYKNAEEKELVEKQLEKLIKI
CCCHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHH
GFLNIEISWSDNEKWFDYVSNLKLKFPKLNLGSASIINKKSIDDSIRLGLNYSMMKVWDK
EEEEEEEEECCCCHHHHHHHCCEEECCCCCCCCCHHCCCCCCCCCEEECCCHHHHHHHHH
DLLNYSRSKNHLLIPGIKNLKDLKEAIDLHCKIIKIYPVKDKNKLIKISQYKNIDFIAAG
HHHHHCCCCCEEECCCCCCHHHHHHHHCCEEEEEEEEECCCCCCEEEEECCCCEEEEEEC
GLSIVDVPLYKSLGYKAIVIGDKGFKNKVIDPNIYEWIQKTSN
CCEEEEEHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-dehydro-3-deoxy-D-gluconate 6-phosphate

Specific reaction: 2-dehydro-3-deoxy-D-gluconate 6-phosphate = pyruvate + D-glyceraldehyde 3-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA