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The map label for this gene is ndhE [H]

Identifier: 123965421

GI number: 123965421

Start: 170878

End: 171198

Strand: Reverse

Name: ndhE [H]

Synonym: P9515_01861

Alternate gene names: 123965421

Gene position: 171198-170878 (Counterclockwise)

Preceding gene: 123965422

Following gene: 123965420

Centisome position: 10.05

GC content: 30.53

Gene sequence:

>321_bases
ATGAATTTAGAATCTATACCTCTTCAAGCTTTTTTAATAGTCTCCTCCATATTATTTTGTATTGGTATTTGGGGTTTATT
AAATAGTAGAAATGCAGTAAGAGTTCTAATGAGCATTGAATTAATGTTGAATGCTGTAAATATAAATTTGATGGCTTTCT
CTTCTTATATAGATAACAACCTAATTCAAGGACAAGTTTTTACGATTTTTGTCATCACAGTTGCAGCCGCAGAAGCCGCG
GTAGGTTTAGCTATATTGTTATCTCTTTATAGAAATCGAGTTACTGTCGATATGGAAAGTTTTAATTTATTAAAGTGGTA
A

Upstream 100 bases:

>100_bases
AGAAGAGATGTATTTAACAAAGATATCTCGACAGGATTACCAGTTGATCAAGAGTTAATAGAGAAGCCAAGTGAGCCATT
GCTAATTAAAAAAAATTAAA

Downstream 100 bases:

>100_bases
AAAGCATCAAGTGAAACTTGCATTGGTGCTTATCATTTATAGATCTAACAGCTCAGTTGCTAAAGAAGCATCTATATTTT
GTGAGAAGGCTCTCAAAGAT

Product: NADH dehydrogenase subunit K

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase subunit 4L; NADH-plastoquinone oxidoreductase subunit 4L; NDH-1, subunit 4L; NDH-E [H]

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MNLESIPLQAFLIVSSILFCIGIWGLLNSRNAVRVLMSIELMLNAVNINLMAFSSYIDNNLIQGQVFTIFVITVAAAEAA
VGLAILLSLYRNRVTVDMESFNLLKW

Sequences:

>Translated_106_residues
MNLESIPLQAFLIVSSILFCIGIWGLLNSRNAVRVLMSIELMLNAVNINLMAFSSYIDNNLIQGQVFTIFVITVAAAEAA
VGLAILLSLYRNRVTVDMESFNLLKW
>Mature_106_residues
MNLESIPLQAFLIVSSILFCIGIWGLLNSRNAVRVLMSIELMLNAVNINLMAFSSYIDNNLIQGQVFTIFVITVAAAEAA
VGLAILLSLYRNRVTVDMESFNLLKW

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: COG0713

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 4L family [H]

Homologues:

Organism=Escherichia coli, GI1788615, Length=100, Percent_Identity=40, Blast_Score=72, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001133 [H]

Pfam domain/function: PF00420 Oxidored_q2 [H]

EC number: 1.6.5.3

Molecular weight: Translated: 11780; Mature: 11780

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLESIPLQAFLIVSSILFCIGIWGLLNSRNAVRVLMSIELMLNAVNINLMAFSSYIDNN
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEHHHHHCCC
LIQGQVFTIFVITVAAAEAAVGLAILLSLYRNRVTVDMESFNLLKW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
>Mature Secondary Structure
MNLESIPLQAFLIVSSILFCIGIWGLLNSRNAVRVLMSIELMLNAVNINLMAFSSYIDNN
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEHHHHHCCC
LIQGQVFTIFVITVAAAEAAVGLAILLSLYRNRVTVDMESFNLLKW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA