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The map label for this gene is sufB [C]

Identifier: 123965317

GI number: 123965317

Start: 87297

End: 88739

Strand: Reverse

Name: sufB [C]

Synonym: P9515_00821

Alternate gene names: 123965317

Gene position: 88739-87297 (Counterclockwise)

Preceding gene: 123965323

Following gene: 123965316

Centisome position: 5.21

GC content: 34.44

Gene sequence:

>1443_bases
ATGGTAAGCGAGAATCTAGTTAAAGATGTCGTTTCAGAACCATACAAATATGGTTTTGTTACAGATATTGAAACTGAAAA
GATTTCCAAAGGTCTAAATGAAGATATTATTCGATTAATTTCAGTCAAAAAAGAAGAGCCTGAATATTTACTTAATTTCA
GATTAAATGCTTTTAAAAAATGGCAAAAAATGGTAGAGCCTAATTGGGCAGAGCTAGGTTATAAAAAAATTGATTATCAA
GATATAATTTATTATTCTGCACCAAAACAAAAAGAAAAAATTTCAAGCTTGGATGAAGTCGATCCTAAACTATTAGAAAC
CTTTGACAAACTAGGCATCCCTCTTACTGAACAAAAAAAGCTCACAAATGTTGCTGTAGATGCAGTTTTTGATAGTGTTT
CTATAGCAACAACGTTCAGAAAAGAACTTGCAGAGCATGGAGTAATATTTTGTTCTATAAGTGAGGCAGTTAAAGATCAC
TCGGATTTAATAGAAAAATATTTAGGTTCTGTAGTTCCAGCTAATGATAATTACTTTGCAGCATTAAATTCTGCTGTTTT
TAGTGATGGTTCATTCGTTTATATACCAAAAGGAATTAAATGTCCTATGGATCTCTCATCTTATTTCAGAATTAATAGCG
GGGATTCCGGTCAGTTTGAGAGAACTCTAATTATCGCAGAAGAAGCCAGCTCAGTTAGCTACCTAGAAGGATGTACAGCT
CCAATGTTTGATACTAATACTTTGCACGCAGCCGTAGTTGAACTTGTAGCCCTAGACGATGCTTCAATTAAATATTCTAC
GGTACAAAATTGGTATGCTGGCAATGAAGACGGAGTTGGCGGAATTTTTAATTTTGTCACCAAAAGGGGTAAATGTTTAG
GAAAAAGAAGTAAAATAAGTTGGTCTCAAGTTGAAACAGGTTCTGCAATAACATGGAAATATCCTAGCTGTCTTCTTTTA
GGAGAAGAATCTGTAGGAGAATTTTATTCTGTAGCACTTACTAATAATCTTCAAAAAGCCGATACTGGCACAAAAATGAT
TCACATTGGTCCTAAAACTAAATCAACAATAGTTAGTAAAGGAATTAGCGCTGGTAAGTCGGCAAATAGTTACAGAGGTC
TTGTGAAAATGGGTTCAAAAGCTGTTGGATCAAGAAATTACAGTCAATGTGACTCAATGTTGATAGGAGATCAAGCTGCT
GCAAATACTTTTCCTTATATTCAATCTCAACAACCAAATTCAGAAATTGAACATGAAGCAAGTACTTGTAGAATTTCTGA
AGACCAACTTTTTTATTTACAAAGCAGAGGGATTGAATTTGAAGAGGCTGTATCAATGATGGTAAGTGGCTTTTGTAGAG
ATGTATTTAATCAACTACCAATGGAATTTGCAGCTGAAGCCGACAAGCTACTTGCCCTCAAATTGGAAGGGTCGGTAGGT
TAA

Upstream 100 bases:

>100_bases
TTAATTTTTTAATTTAATTTAAGGATCAAAACGCAATATTTGTCACATATTTAGTTAAAGTATAGAAGGATAAATCGAAA
TAGATTAACTTTATACGATC

Downstream 100 bases:

>100_bases
ATTAATTTATTAAATTGTGATGCAAATCAAATCAAAAGCATTAGATCCAATATTAGAAGTCAATAGTCTATTTGCATCTA
TAGAGAATCTTCCAATTTTA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MVSENLVKDVVSEPYKYGFVTDIETEKISKGLNEDIIRLISVKKEEPEYLLNFRLNAFKKWQKMVEPNWAELGYKKIDYQ
DIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFRKELAEHGVIFCSISEAVKDH
SDLIEKYLGSVVPANDNYFAALNSAVFSDGSFVYIPKGIKCPMDLSSYFRINSGDSGQFERTLIIAEEASSVSYLEGCTA
PMFDTNTLHAAVVELVALDDASIKYSTVQNWYAGNEDGVGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLL
GEESVGEFYSVALTNNLQKADTGTKMIHIGPKTKSTIVSKGISAGKSANSYRGLVKMGSKAVGSRNYSQCDSMLIGDQAA
ANTFPYIQSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG

Sequences:

>Translated_480_residues
MVSENLVKDVVSEPYKYGFVTDIETEKISKGLNEDIIRLISVKKEEPEYLLNFRLNAFKKWQKMVEPNWAELGYKKIDYQ
DIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFRKELAEHGVIFCSISEAVKDH
SDLIEKYLGSVVPANDNYFAALNSAVFSDGSFVYIPKGIKCPMDLSSYFRINSGDSGQFERTLIIAEEASSVSYLEGCTA
PMFDTNTLHAAVVELVALDDASIKYSTVQNWYAGNEDGVGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLL
GEESVGEFYSVALTNNLQKADTGTKMIHIGPKTKSTIVSKGISAGKSANSYRGLVKMGSKAVGSRNYSQCDSMLIGDQAA
ANTFPYIQSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG
>Mature_480_residues
MVSENLVKDVVSEPYKYGFVTDIETEKISKGLNEDIIRLISVKKEEPEYLLNFRLNAFKKWQKMVEPNWAELGYKKIDYQ
DIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFRKELAEHGVIFCSISEAVKDH
SDLIEKYLGSVVPANDNYFAALNSAVFSDGSFVYIPKGIKCPMDLSSYFRINSGDSGQFERTLIIAEEASSVSYLEGCTA
PMFDTNTLHAAVVELVALDDASIKYSTVQNWYAGNEDGVGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLL
GEESVGEFYSVALTNNLQKADTGTKMIHIGPKTKSTIVSKGISAGKSANSYRGLVKMGSKAVGSRNYSQCDSMLIGDQAA
ANTFPYIQSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=57.2025052192067, Blast_Score=595, Evalue=1e-171,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53144; Mature: 53144

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSENLVKDVVSEPYKYGFVTDIETEKISKGLNEDIIRLISVKKEEPEYLLNFRLNAFKK
CCCHHHHHHHHCCCCCCCCEECCCHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
WQKMVEPNWAELGYKKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKK
HHHHHCCCHHHCCCEECCHHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
LTNVAVDAVFDSVSIATTFRKELAEHGVIFCSISEAVKDHSDLIEKYLGSVVPANDNYFA
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEE
ALNSAVFSDGSFVYIPKGIKCPMDLSSYFRINSGDSGQFERTLIIAEEASSVSYLEGCTA
EEHHHHCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCEEEEEEEEECCCCHHHHHCCCC
PMFDTNTLHAAVVELVALDDASIKYSTVQNWYAGNEDGVGGIFNFVTKRGKCLGKRSKIS
CCCCCCHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
WSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQKADTGTKMIHIGPKTKSTIVSK
HHHCCCCCEEEEECCCEEEECCCCCCHHEEEHHHCCCHHCCCCCEEEEECCCCHHHHHHH
GISAGKSANSYRGLVKMGSKAVGSRNYSQCDSMLIGDQAAANTFPYIQSQQPNSEIEHEA
CCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHCCH
STCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG
HHEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCC
>Mature Secondary Structure
MVSENLVKDVVSEPYKYGFVTDIETEKISKGLNEDIIRLISVKKEEPEYLLNFRLNAFKK
CCCHHHHHHHHCCCCCCCCEECCCHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
WQKMVEPNWAELGYKKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKK
HHHHHCCCHHHCCCEECCHHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
LTNVAVDAVFDSVSIATTFRKELAEHGVIFCSISEAVKDHSDLIEKYLGSVVPANDNYFA
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEE
ALNSAVFSDGSFVYIPKGIKCPMDLSSYFRINSGDSGQFERTLIIAEEASSVSYLEGCTA
EEHHHHCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCEEEEEEEEECCCCHHHHHCCCC
PMFDTNTLHAAVVELVALDDASIKYSTVQNWYAGNEDGVGGIFNFVTKRGKCLGKRSKIS
CCCCCCHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
WSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQKADTGTKMIHIGPKTKSTIVSK
HHHCCCCCEEEEECCCEEEECCCCCCHHEEEHHHCCCHHCCCCCEEEEECCCCHHHHHHH
GISAGKSANSYRGLVKMGSKAVGSRNYSQCDSMLIGDQAAANTFPYIQSQQPNSEIEHEA
CCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHCCH
STCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG
HHEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]