| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965308
Identifier: 123965308
GI number: 123965308
Start: 78419
End: 78652
Strand: Reverse
Name: 123965308
Synonym: P9515_00731
Alternate gene names: NA
Gene position: 78652-78419 (Counterclockwise)
Preceding gene: 123965309
Following gene: 123965305
Centisome position: 4.62
GC content: 26.92
Gene sequence:
>234_bases ATGACATCAAATCAAGAACAATATAATAAAGAATCTATGGATGTAGAAAAAATAAATTCTGAAGAAATTAAAGTTGACGA GCAATCAACTGAAATTGAAGATACCTATAAGTTTGGATGGAGCAATTATTCAGAAATAACAAATGGAAGATTCGCAATGC TTGGATTTTTAGCAATAATATTAATTGAACTAATTAGTCAGAAATCATTTTTTAACTGGGTTGGGATATTTTAA
Upstream 100 bases:
>100_bases TTTAAAGGAATTTCATGAGAACATTCTAGAGTTAAATGGAAAAGGAGACTGGAAATTATTTACTACAGATAAGTATAATT TTAAAAATTAGTTTAAAATC
Downstream 100 bases:
>100_bases TTAATCATCAAATCTAGAACTGTTATCTCTGGATTTATTTTTTTTGGTGCCAACTGTATATCTTCCAGCTTGATTTTTGG AAGTTGATCTGTCATTAGAT
Product: high light inducible protein
Products: NA
Alternate protein names: High Light Inducible Protein-Like
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MTSNQEQYNKESMDVEKINSEEIKVDEQSTEIEDTYKFGWSNYSEITNGRFAMLGFLAIILIELISQKSFFNWVGIF
Sequences:
>Translated_77_residues MTSNQEQYNKESMDVEKINSEEIKVDEQSTEIEDTYKFGWSNYSEITNGRFAMLGFLAIILIELISQKSFFNWVGIF >Mature_76_residues TSNQEQYNKESMDVEKINSEEIKVDEQSTEIEDTYKFGWSNYSEITNGRFAMLGFLAIILIELISQKSFFNWVGIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9027; Mature: 8896
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNQEQYNKESMDVEKINSEEIKVDEQSTEIEDTYKFGWSNYSEITNGRFAMLGFLAII CCCCCCHHCCCCCCHHHCCCCCEEECCCCCCHHHHHHCCCCCCHHHCCCHHHHHHHHHHH LIELISQKSFFNWVGIF HHHHHHCCCHHHHHCCC >Mature Secondary Structure TSNQEQYNKESMDVEKINSEEIKVDEQSTEIEDTYKFGWSNYSEITNGRFAMLGFLAII CCCCCHHCCCCCCHHHCCCCCEEECCCCCCHHHHHHCCCCCCHHHCCCHHHHHHHHHHH LIELISQKSFFNWVGIF HHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA