Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965298

Identifier: 123965298

GI number: 123965298

Start: 67795

End: 68256

Strand: Reverse

Name: 123965298

Synonym: P9515_00631

Alternate gene names: NA

Gene position: 68256-67795 (Counterclockwise)

Preceding gene: 123965303

Following gene: 123965297

Centisome position: 4.01

GC content: 33.98

Gene sequence:

>462_bases
ATGGAAGCTTTTCATCCTCCAAAAGAAGTTAAAGAAACAGTTAATTCTTCTGCACCACGAGGGGCAGAAGCAATGTCAGA
AAAATGGTTACGTGAGAAAATCGATAGTTTAATTCCCATAATTCAAGAGAAATGGCCTACCATTGCACAACAAACTCTTG
AAACTGCGAAAGGAAGCCTTGATGACTTGGTAGGAGTAATAGCAAGTCATACTGGATCGTCTGCTAGTGGTATTAAAAAT
CAATTATTTGACATCATTGATTCAATTCAAGAAAATAATTGGGAAATTGCAGAGAAAATTGAACCAATCGAAGGCCAATT
GGAAGAGTTACTAGATGAATTGAATAATACATTGAGGCCAAAAATAGAAAATCCAATAAGAAGAAAACCAATTTTATCTA
TTGCTATTGCTGCTGGTATAGGATTATTTATAGGTACTTTAATAAATAGCGGAAGAAAATAA

Upstream 100 bases:

>100_bases
ATTTTATATGTCTATTATTTTATTATCAAAAACAAATCTAACGAGAAGGGTTTCAAATTAAGAAAATACAGACTACTCTA
GAAGAAATGAAGGTGGATCA

Downstream 100 bases:

>100_bases
ATGGATAAACCCAAAAGCAAAAACTTTGCTAATACCGCTTCAAGAATCTCTGCAATTGCGAGTTCTGTTATGGATTTGCA
TGTAAGGATAGCACTTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MEAFHPPKEVKETVNSSAPRGAEAMSEKWLREKIDSLIPIIQEKWPTIAQQTLETAKGSLDDLVGVIASHTGSSASGIKN
QLFDIIDSIQENNWEIAEKIEPIEGQLEELLDELNNTLRPKIENPIRRKPILSIAIAAGIGLFIGTLINSGRK

Sequences:

>Translated_153_residues
MEAFHPPKEVKETVNSSAPRGAEAMSEKWLREKIDSLIPIIQEKWPTIAQQTLETAKGSLDDLVGVIASHTGSSASGIKN
QLFDIIDSIQENNWEIAEKIEPIEGQLEELLDELNNTLRPKIENPIRRKPILSIAIAAGIGLFIGTLINSGRK
>Mature_153_residues
MEAFHPPKEVKETVNSSAPRGAEAMSEKWLREKIDSLIPIIQEKWPTIAQQTLETAKGSLDDLVGVIASHTGSSASGIKN
QLFDIIDSIQENNWEIAEKIEPIEGQLEELLDELNNTLRPKIENPIRRKPILSIAIAAGIGLFIGTLINSGRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16877; Mature: 16877

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAFHPPKEVKETVNSSAPRGAEAMSEKWLREKIDSLIPIIQEKWPTIAQQTLETAKGSL
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DDLVGVIASHTGSSASGIKNQLFDIIDSIQENNWEIAEKIEPIEGQLEELLDELNNTLRP
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
KIENPIRRKPILSIAIAAGIGLFIGTLINSGRK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEAFHPPKEVKETVNSSAPRGAEAMSEKWLREKIDSLIPIIQEKWPTIAQQTLETAKGSL
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DDLVGVIASHTGSSASGIKNQLFDIIDSIQENNWEIAEKIEPIEGQLEELLDELNNTLRP
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
KIENPIRRKPILSIAIAAGIGLFIGTLINSGRK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA