| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965293
Identifier: 123965293
GI number: 123965293
Start: 63858
End: 64529
Strand: Reverse
Name: 123965293
Synonym: P9515_00581
Alternate gene names: NA
Gene position: 64529-63858 (Counterclockwise)
Preceding gene: 123965295
Following gene: 123965291
Centisome position: 3.79
GC content: 40.33
Gene sequence:
>672_bases TTGTTTATTACTGTTTGCGGGCAAAAAGGAGGAGTTGCTAAAACTTGTACAAGTATTCACCTTGCAAGTGTTTGGCATTC TCAAGGCAAAAAAGTATGTATAGTCGATGCTGATAAAAATAGATCTGCATTAGCCTACTCATCCAGAGGCAACCTTCCAT TTCCTGTTTTTCCAGTTAGTTCAGCCGCAAAAGCTTCAAGATCTTCCGAAATTGTAATAACTGACGGACAAGCAAGCAGT GATAAAGAAGAACTTAAACATCTTGCTTACGGATCAGATTTAGTGATTCTCCCAACTACTGCCAAAGCAAGGTCTGTTGA ATTAACAGTTGAATTAGCTAGCTTGTTGAATAGTCTCAAAGTTAACCATGCAGTCACTATTGTAAAAGTAGATTTCAGAC AACAAAAAGCAGCAAAACAGGCCAAGGCCGCGTTAGAAAATTTCGGTTTACACGTTTTTGATACATTCATTCCTTTACTT TCAGCCTTTGATAAGGCAGAGGCCTCGGGAAATGCAGTATTTGAAGCTGTAGACGATTTAGGAAGATCAGATCCTCGTCG AATGGCGGGCTGGTCTGCCTACTGTTCCATTGCATCTCAAATTCCATGCCTGATTTCGAAGCACTCATCCGACACCAACA ACTTAAACAACCAAAAACTAATCAGCGCCTAA
Upstream 100 bases:
>100_bases AAAAGAATATTTATGAAATATAAGTTTTAAAACTTTTCAAATAATTACCTATTGACATTAAGAAATTATTCTCCAAAGTA AAGTAAATATTAGTAAAAAA
Downstream 100 bases:
>100_bases AAGTAGTTGATTCCCCTGATTTCGATATAGAAAATGGAGAAAATTCACAAATTATTCAACCCAAAATATTTAATTATTTT ATTGGAAGTTTTATTGGTTC
Product: chromosome partitioning ATPase protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MFITVCGQKGGVAKTCTSIHLASVWHSQGKKVCIVDADKNRSALAYSSRGNLPFPVFPVSSAAKASRSSEIVITDGQASS DKEELKHLAYGSDLVILPTTAKARSVELTVELASLLNSLKVNHAVTIVKVDFRQQKAAKQAKAALENFGLHVFDTFIPLL SAFDKAEASGNAVFEAVDDLGRSDPRRMAGWSAYCSIASQIPCLISKHSSDTNNLNNQKLISA
Sequences:
>Translated_223_residues MFITVCGQKGGVAKTCTSIHLASVWHSQGKKVCIVDADKNRSALAYSSRGNLPFPVFPVSSAAKASRSSEIVITDGQASS DKEELKHLAYGSDLVILPTTAKARSVELTVELASLLNSLKVNHAVTIVKVDFRQQKAAKQAKAALENFGLHVFDTFIPLL SAFDKAEASGNAVFEAVDDLGRSDPRRMAGWSAYCSIASQIPCLISKHSSDTNNLNNQKLISA >Mature_223_residues MFITVCGQKGGVAKTCTSIHLASVWHSQGKKVCIVDADKNRSALAYSSRGNLPFPVFPVSSAAKASRSSEIVITDGQASS DKEELKHLAYGSDLVILPTTAKARSVELTVELASLLNSLKVNHAVTIVKVDFRQQKAAKQAKAALENFGLHVFDTFIPLL SAFDKAEASGNAVFEAVDDLGRSDPRRMAGWSAYCSIASQIPCLISKHSSDTNNLNNQKLISA
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23879; Mature: 23879
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFITVCGQKGGVAKTCTSIHLASVWHSQGKKVCIVDADKNRSALAYSSRGNLPFPVFPVS CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCEEEECC SAAKASRSSEIVITDGQASSDKEELKHLAYGSDLVILPTTAKARSVELTVELASLLNSLK HHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHC VNHAVTIVKVDFRQQKAAKQAKAALENFGLHVFDTFIPLLSAFDKAEASGNAVFEAVDDL CCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GRSDPRRMAGWSAYCSIASQIPCLISKHSSDTNNLNNQKLISA CCCCCHHHCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEECC >Mature Secondary Structure MFITVCGQKGGVAKTCTSIHLASVWHSQGKKVCIVDADKNRSALAYSSRGNLPFPVFPVS CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCEEEECC SAAKASRSSEIVITDGQASSDKEELKHLAYGSDLVILPTTAKARSVELTVELASLLNSLK HHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHC VNHAVTIVKVDFRQQKAAKQAKAALENFGLHVFDTFIPLLSAFDKAEASGNAVFEAVDDL CCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GRSDPRRMAGWSAYCSIASQIPCLISKHSSDTNNLNNQKLISA CCCCCHHHCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA