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The map label for this gene is yfiO [C]

Identifier: 121999147

GI number: 121999147

Start: 2603271

End: 2604041

Strand: Reverse

Name: yfiO [C]

Synonym: Hhal_2369

Alternate gene names: 121999147

Gene position: 2604041-2603271 (Counterclockwise)

Preceding gene: 121999156

Following gene: 121999145

Centisome position: 97.22

GC content: 70.43

Gene sequence:

>771_bases
ATGGGGGTGTCGATCCGCTGCCTACGATACCGTGTTCTGTCTCTGTTGACAGCCGGTTTGCTGCTCAGCGGCTGTGCAGC
CCTCGGCGGTGGGTCCGCTCAGGAGCGCGAACAGGCTCGGTCGCTCTACGCCGAGGCGCTGGAGGCCGTCGAGCGCGGGG
ACCTCGAGGCGGCCCAGGGGATGCTCGACGAGCTGCAGGAGGCGTACCCCGAGACGCGGCACGCCCGTCAGGCGCTTCTC
GAGGCTGCCTATGTGGAGTATCGCCTGGGGCAGTACCCGCAGGCGATCGAACGGGCCGAAATCTTCCATCGCCAAGCTGC
CCAGACCGAGGAGCAGGCCGACGACGAAGATCTCCGTTACGCCCTTTATCTCCGGGCCGCCGCCGCGCACGCGCTGTGGG
ATGCCACGGAGGGCGAAGCGGAGCGGGACGCGGCCGGGGCCCGGCGCGCCTTTGGTTACTACCGAGACATCGTCCGCGAC
TACCCGGAGAGCGAACGGGCCGAAGAGGCCGCCCGGCGAATGAACGAGATTCGTAGCGATGTCGCCGAGGAAGAGCTGCG
TCGGGCTCGGCGCCGGCTGGACGACGGCGCTTACGCCGAGGCGGCCGAGCGTGGGGCCTGGATCGCCGAGCAGTACCCCG
GGCAGCAGGCCGCCGCCGACGCCCTGGCGCTGCAGGTCGATGCCCTCGAGCGGCTGGGCCGCGAGCGCGAGGCAGAGGCC
ACCCGGCGCATGCTGGAGATCAAGCACCCCGATCACCCGGCGTTGCGCTAG

Upstream 100 bases:

>100_bases
GGGGCAGGAGGGGGCGGGCTGACTGAGTACCCCGTTCCGTCCGCGAATCAGGGAAACATTGACCGTGCATAGTTGCACCC
CAGCGAGACGTGCAAAGGGG

Downstream 100 bases:

>100_bases
CCGCCATGCGCCGCACCCTGGCCCACCTGGCCGCCCTTGCGCTGCTGCTGCAGCCGATGGCCGGTGGGGTCTACTCCTTT
TGAGTCGGCAACAGGGCCAG

Product: DNA uptake lipoprotein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MGVSIRCLRYRVLSLLTAGLLLSGCAALGGGSAQEREQARSLYAEALEAVERGDLEAAQGMLDELQEAYPETRHARQALL
EAAYVEYRLGQYPQAIERAEIFHRQAAQTEEQADDEDLRYALYLRAAAAHALWDATEGEAERDAAGARRAFGYYRDIVRD
YPESERAEEAARRMNEIRSDVAEEELRRARRRLDDGAYAEAAERGAWIAEQYPGQQAAADALALQVDALERLGREREAEA
TRRMLEIKHPDHPALR

Sequences:

>Translated_256_residues
MGVSIRCLRYRVLSLLTAGLLLSGCAALGGGSAQEREQARSLYAEALEAVERGDLEAAQGMLDELQEAYPETRHARQALL
EAAYVEYRLGQYPQAIERAEIFHRQAAQTEEQADDEDLRYALYLRAAAAHALWDATEGEAERDAAGARRAFGYYRDIVRD
YPESERAEEAARRMNEIRSDVAEEELRRARRRLDDGAYAEAAERGAWIAEQYPGQQAAADALALQVDALERLGREREAEA
TRRMLEIKHPDHPALR
>Mature_255_residues
GVSIRCLRYRVLSLLTAGLLLSGCAALGGGSAQEREQARSLYAEALEAVERGDLEAAQGMLDELQEAYPETRHARQALLE
AAYVEYRLGQYPQAIERAEIFHRQAAQTEEQADDEDLRYALYLRAAAAHALWDATEGEAERDAAGARRAFGYYRDIVRDY
PESERAEEAARRMNEIRSDVAEEELRRARRRLDDGAYAEAAERGAWIAEQYPGQQAAADALALQVDALERLGREREAEAT
RRMLEIKHPDHPALR

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=237, Percent_Identity=26.5822784810127, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28776; Mature: 28645

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSIRCLRYRVLSLLTAGLLLSGCAALGGGSAQEREQARSLYAEALEAVERGDLEAAQG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MLDELQEAYPETRHARQALLEAAYVEYRLGQYPQAIERAEIFHRQAAQTEEQADDEDLRY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ALYLRAAAAHALWDATEGEAERDAAGARRAFGYYRDIVRDYPESERAEEAARRMNEIRSD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VAEEELRRARRRLDDGAYAEAAERGAWIAEQYPGQQAAADALALQVDALERLGREREAEA
HHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
TRRMLEIKHPDHPALR
HHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GVSIRCLRYRVLSLLTAGLLLSGCAALGGGSAQEREQARSLYAEALEAVERGDLEAAQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MLDELQEAYPETRHARQALLEAAYVEYRLGQYPQAIERAEIFHRQAAQTEEQADDEDLRY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ALYLRAAAAHALWDATEGEAERDAAGARRAFGYYRDIVRDYPESERAEEAARRMNEIRSD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VAEEELRRARRRLDDGAYAEAAERGAWIAEQYPGQQAAADALALQVDALERLGREREAEA
HHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
TRRMLEIKHPDHPALR
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]