Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121999130

Identifier: 121999130

GI number: 121999130

Start: 2578160

End: 2578399

Strand: Reverse

Name: 121999130

Synonym: Hhal_2352

Alternate gene names: NA

Gene position: 2578399-2578160 (Counterclockwise)

Preceding gene: 121999133

Following gene: 121999123

Centisome position: 96.26

GC content: 65.83

Gene sequence:

>240_bases
ATGACCGTGCTCGCACGCAAGACGGAGTGGAACGAGGTCCGCCTGCCGCCGGAGATCGCCGGGCGGTTCTCGGATGTCGA
TTACTTCGAGGTGGTGGTGACCCGCAAGGGCCGGTTGCTGCTCTCGCCGGTAAACCCGGAAGAGAAAGAAGAGCGCGTCA
AAGAGGAGATCCAGGACCTCGGCGTGGCCGAGGACGATCTGCGCGCGGCGGCCGCGGCGTTGCTGGGCAAACGGGGTTGA

Upstream 100 bases:

>100_bases
TTATCATCCCGGCCCGGGCATCCTGGATGGACCCTTCCCGACCGGCGCGCGGTGTGCCAACTTTTGACGCAGGATCAGGC
CAGGAACAGGAGAGACCGTC

Downstream 100 bases:

>100_bases
CCCTCTCTGCGCGCCCTGCGCATTGCAACCCGAGGTTCCATTCCGCCTAGAACGGCCACACCCACGGGATCACCGCCAGC
GCTACGGCTGCGGTGACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MTVLARKTEWNEVRLPPEIAGRFSDVDYFEVVVTRKGRLLLSPVNPEEKEERVKEEIQDLGVAEDDLRAAAAALLGKRG

Sequences:

>Translated_79_residues
MTVLARKTEWNEVRLPPEIAGRFSDVDYFEVVVTRKGRLLLSPVNPEEKEERVKEEIQDLGVAEDDLRAAAAALLGKRG
>Mature_78_residues
TVLARKTEWNEVRLPPEIAGRFSDVDYFEVVVTRKGRLLLSPVNPEEKEERVKEEIQDLGVAEDDLRAAAAALLGKRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8892; Mature: 8761

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLARKTEWNEVRLPPEIAGRFSDVDYFEVVVTRKGRLLLSPVNPEEKEERVKEEIQDL
CCCCCCCCCCCCEECCHHHHCCCCCCCHHEEEEECCCEEEECCCCCCHHHHHHHHHHHHC
GVAEDDLRAAAAALLGKRG
CCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TVLARKTEWNEVRLPPEIAGRFSDVDYFEVVVTRKGRLLLSPVNPEEKEERVKEEIQDL
CCCCCCCCCCCEECCHHHHCCCCCCCHHEEEEECCCEEEECCCCCCHHHHHHHHHHHHC
GVAEDDLRAAAAALLGKRG
CCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA