| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is aroK
Identifier: 121999037
GI number: 121999037
Start: 2480417
End: 2480950
Strand: Reverse
Name: aroK
Synonym: Hhal_2258
Alternate gene names: 121999037
Gene position: 2480950-2480417 (Counterclockwise)
Preceding gene: 121999040
Following gene: 121999036
Centisome position: 92.63
GC content: 71.16
Gene sequence:
>534_bases ATGGCACACTGGAGAACACCGTCGCGGATCTTTCTGGTCGGCCCCATGGGGGCAGGCAAGAGCACTGTAGGGCGCGAGCT GGCCAACCTGCTGGGTCTGGAGTTCATCGATAGCGATGCCGCCATCGAGGCGCGCACCGGGGTGAGCATCCCGTGGATCT TCGATATCGAGGGCGAGGCCGGGTTCCGGGCCCGCGAAGCGGCAGTGATCGACGAGCTGACGGGCCGGGACGGCGTCGTG GTGGCCACCGGCGGCGGTGCGGTCACGACGCCGGCCAACCGTGACCTGCTGGGCGCGCGGGGGGTGGTGGTCTACCTGTA CACGCCGGTATCGGTGCAGCTGCAGCGCACCCGCCACGACACCAACCGTCCGCTCCTGCAGAGTGACGACCCCGAGGCGC GGCTGCAGAGCCTGCTCGCCGAGCGGGATCCGCTCTACCGGGAGGTGGCCGACGTGGTGGTGGAGACGACCGGCGGGCGG GCGCGGAGCGTGGCGCGGCGGATCGTCGAGGCGCTGCAGGGGCAGCCCTCCTAG
Upstream 100 bases:
>100_bases TCGAAGAGGATGTGCTGACGGCCTTGGCGCGTTTGTTGCGGATCCATGGCCGCCTACTCTGCCATACCGAGCCCCGTGTC GGTGGTGGTAAAGTGCCGTC
Downstream 100 bases:
>100_bases TCGATGACGATGAGACGGATGAACGAGAGCGGACAGGCAGCAGGAGCGGGCATGCGGACACAATGGGTCGAGCTCGGGGA GCGCAGTTACCCGATCTACA
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MAHWRTPSRIFLVGPMGAGKSTVGRELANLLGLEFIDSDAAIEARTGVSIPWIFDIEGEAGFRAREAAVIDELTGRDGVV VATGGGAVTTPANRDLLGARGVVVYLYTPVSVQLQRTRHDTNRPLLQSDDPEARLQSLLAERDPLYREVADVVVETTGGR ARSVARRIVEALQGQPS
Sequences:
>Translated_177_residues MAHWRTPSRIFLVGPMGAGKSTVGRELANLLGLEFIDSDAAIEARTGVSIPWIFDIEGEAGFRAREAAVIDELTGRDGVV VATGGGAVTTPANRDLLGARGVVVYLYTPVSVQLQRTRHDTNRPLLQSDDPEARLQSLLAERDPLYREVADVVVETTGGR ARSVARRIVEALQGQPS >Mature_176_residues AHWRTPSRIFLVGPMGAGKSTVGRELANLLGLEFIDSDAAIEARTGVSIPWIFDIEGEAGFRAREAAVIDELTGRDGVVV ATGGGAVTTPANRDLLGARGVVVYLYTPVSVQLQRTRHDTNRPLLQSDDPEARLQSLLAERDPLYREVADVVVETTGGRA RSVARRIVEALQGQPS
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=174, Percent_Identity=53.448275862069, Blast_Score=182, Evalue=1e-47, Organism=Escherichia coli, GI1786587, Length=152, Percent_Identity=40.7894736842105, Blast_Score=113, Evalue=7e-27,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_HALHL (A1WZB0)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003824.1 - ProteinModelPortal: A1WZB0 - SMR: A1WZB0 - STRING: A1WZB0 - GeneID: 4709140 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_2258 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: VIYLRAN - PhylomeDB: A1WZB0 - ProtClustDB: CLSK727722 - BioCyc: HHAL349124:HHAL_2258-MONOMER - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 19060; Mature: 18929
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 39-39 BINDING 63-63 BINDING 85-85 BINDING 123-123 BINDING 142-142 BINDING 160-160
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHWRTPSRIFLVGPMGAGKSTVGRELANLLGLEFIDSDAAIEARTGVSIPWIFDIEGEA CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCEEECCCCCCCEEEEECCCC GFRAREAAVIDELTGRDGVVVATGGGAVTTPANRDLLGARGVVVYLYTPVSVQLQRTRHD CCCHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCC TNRPLLQSDDPEARLQSLLAERDPLYREVADVVVETTGGRARSVARRIVEALQGQPS CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AHWRTPSRIFLVGPMGAGKSTVGRELANLLGLEFIDSDAAIEARTGVSIPWIFDIEGEA CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCEEECCCCCCCEEEEECCCC GFRAREAAVIDELTGRDGVVVATGGGAVTTPANRDLLGARGVVVYLYTPVSVQLQRTRHD CCCHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCC TNRPLLQSDDPEARLQSLLAERDPLYREVADVVVETTGGRARSVARRIVEALQGQPS CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA