Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121999003

Identifier: 121999003

GI number: 121999003

Start: 2437761

End: 2438264

Strand: Reverse

Name: 121999003

Synonym: Hhal_2224

Alternate gene names: NA

Gene position: 2438264-2437761 (Counterclockwise)

Preceding gene: 121999005

Following gene: 121999002

Centisome position: 91.03

GC content: 69.44

Gene sequence:

>504_bases
ATGTCGGCCATCCGTACCCCCCGTGAACTCGATACCCTGTGCTCGTGCCTGACCAGCGAGGCGCAATTCCAGAGTATGCA
AATGATCCTGGCGTTGAACGCCTCGCCCGGCGCCCTCGCGGCCGAGCGGGGGGCAGTGGCCCGGTTGGTCGACTTCGCGG
AGCATGTCCAGCGCCGGATCGACGAGGCCCGCTACGGGACGCCCCTCGATCCCCGTGGGGAGGTCGCGGTTCTGCTGCGC
GAGACCCGCAAACGGCTGCAGCGGAATCACCAGGGCCTGGTTGCCGCGCGCAAGGTGGTGCTGGTCGATCCGCAGCTCGC
CCCGGCGGCGCGCAAGCGCTGGTTTGAGGAGATCGTGCGGGCCGAGACCGAGCACCAGGTCCTTCTCGCCACGCTGGAGG
GGGTGCTCTACCTGGTCCAGGACCACGACGTTGGGGTGGCGATGGCCAACGCCCCGGGCGACGCCGACTGGCGTCAGGCA
CGGAGCGTCCTCGCCCGTTTCTGA

Upstream 100 bases:

>100_bases
TCGTGCCCGTGTCGCAACGCCTGCGACCCGCTGGCACGGACCCTGCTAACAGTCTGGGAACTGCGCAAACGCAGCATCCC
ACTCAAGGAGCAACCCTGCC

Downstream 100 bases:

>100_bases
CCCGGCGCCCGCGCGGCGGGGCCGGAGAGGTGGCTCAGGCGGTATAATACCCGGGTTCGATGGAGGACCCGGAGCCATGG
AGCTGACCTACTACACCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSAIRTPRELDTLCSCLTSEAQFQSMQMILALNASPGALAAERGAVARLVDFAEHVQRRIDEARYGTPLDPRGEVAVLLR
ETRKRLQRNHQGLVAARKVVLVDPQLAPAARKRWFEEIVRAETEHQVLLATLEGVLYLVQDHDVGVAMANAPGDADWRQA
RSVLARF

Sequences:

>Translated_167_residues
MSAIRTPRELDTLCSCLTSEAQFQSMQMILALNASPGALAAERGAVARLVDFAEHVQRRIDEARYGTPLDPRGEVAVLLR
ETRKRLQRNHQGLVAARKVVLVDPQLAPAARKRWFEEIVRAETEHQVLLATLEGVLYLVQDHDVGVAMANAPGDADWRQA
RSVLARF
>Mature_166_residues
SAIRTPRELDTLCSCLTSEAQFQSMQMILALNASPGALAAERGAVARLVDFAEHVQRRIDEARYGTPLDPRGEVAVLLRE
TRKRLQRNHQGLVAARKVVLVDPQLAPAARKRWFEEIVRAETEHQVLLATLEGVLYLVQDHDVGVAMANAPGDADWRQAR
SVLARF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18592; Mature: 18460

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIRTPRELDTLCSCLTSEAQFQSMQMILALNASPGALAAERGAVARLVDFAEHVQRRI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
DEARYGTPLDPRGEVAVLLRETRKRLQRNHQGLVAARKVVLVDPQLAPAARKRWFEEIVR
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHH
AETEHQVLLATLEGVLYLVQDHDVGVAMANAPGDADWRQARSVLARF
CCCHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SAIRTPRELDTLCSCLTSEAQFQSMQMILALNASPGALAAERGAVARLVDFAEHVQRRI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
DEARYGTPLDPRGEVAVLLRETRKRLQRNHQGLVAARKVVLVDPQLAPAARKRWFEEIVR
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHH
AETEHQVLLATLEGVLYLVQDHDVGVAMANAPGDADWRQARSVLARF
CCCHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA