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The map label for this gene is perM [H]

Identifier: 121998980

GI number: 121998980

Start: 2415278

End: 2416375

Strand: Reverse

Name: perM [H]

Synonym: Hhal_2201

Alternate gene names: 121998980

Gene position: 2416375-2415278 (Counterclockwise)

Preceding gene: 121998984

Following gene: 121998977

Centisome position: 90.22

GC content: 63.39

Gene sequence:

>1098_bases
TTGGAGCTGATTCGTAGCTGGCTGCGACGCACATTCAACGACCCTCAGATCGCTGCCTTCATCGTCTTGATGGTGGTGGG
CCTCGGGGCGCTGCTGATGCTCGGCAGCATTCTCGCCCCGGTGATCGCCGCCGTGGTGATCGCCTACTTGCTCGAAGGGG
TGGTGAGGGGTTTCGAACGCGCCGGGGTGCCCCGGATGCTGGCGGTGGTGATCGTCATCCTGTTCCTCACCACCTTCCTG
GTCCTGGTGCTCTTTGCGCTGATCCCGTTGCTCTACCGCCAGGTGGGCCAGCTGGTGGATCAGCTGCCGGCGATCCTCGC
CCAGGGGCAGATGCTGCTGCTGCAGTTGCCCGAGCATTACCCGCAGCTCTTCTCCGAGGCGCAGATCCGCGAGATGCTCG
ATACCGCCCGGCGGGAGATCACCGACCTGGGGCAGCGGGTGGTGGCCTCGGTGACGGTTCAGTCGCTGATGATCCTCGGC
ACGCTGGTGATCTACGCGGTGCTGGTGCCATTTTTGGTCTTCTTCCTGCTCAAGGACAAACGGCTGTTGCTGCAGTGGGT
CAGCAACCATATGCCCCGCCACCGTGCCTTTGCCTCGGAGGTGTGGCTGGACGTCGATCAGCAGATCGGCAACTACGTCC
GCGGCAAGTTCATCGAGATCCTGATCGTCTGGGCGGTCACGTACATCACCTTCTCCCTGTTGGGGGTGCCGTTTGCCATG
CTGCTCGCGGTGGCCACCGGCTTGTCGGTGATCATCCCCTATGTCGGGGCCTTCGTGATGACCGTGCCGGTGGCGCTGAT
CGCCTACTTCCACTTCGGGGTGAGCCAGGAGCTGGTCTACGTCCTGGTGGCCTACACCATCATCCAGGTGCTCGACGGCA
ACGTCCTGGTGCCGCTGCTCTTCTCCGAGGTGGTGAACCTCCACCCGGTGGCGATCATCGTCTCGATCCTGGTCTTCGGC
GGGATCTGGGGATTCTGGGGGATCTTCTTCGCCATCCCGTTGGCCACCTTTATCCAGGCGATCATCAAGGCGTGGGTGCG
GCGCCGCAAGCCGCCGGATGACGAATCCGCAGGGGTCGAGGAGGAGCTGGTCCCCTGA

Upstream 100 bases:

>100_bases
TCAACAATTGGACTGGGCGGCGTGGATGCAAGTTCCCGCAGGCGCAAGTCTGTTCTGGCTACGTTATCATCGAAGCGCGA
TCCGCGAAGGAGATGCGCCC

Downstream 100 bases:

>100_bases
GCCCGAGCGGGGCGCCGCCGTGGCGGCGCCCCGGGTCTCAGAGGACGTCGGAGGCGTAGTCCGCCAGCCGCGAGCGCTCG
CCGCGGCGCAGGGTCACGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MELIRSWLRRTFNDPQIAAFIVLMVVGLGALLMLGSILAPVIAAVVIAYLLEGVVRGFERAGVPRMLAVVIVILFLTTFL
VLVLFALIPLLYRQVGQLVDQLPAILAQGQMLLLQLPEHYPQLFSEAQIREMLDTARREITDLGQRVVASVTVQSLMILG
TLVIYAVLVPFLVFFLLKDKRLLLQWVSNHMPRHRAFASEVWLDVDQQIGNYVRGKFIEILIVWAVTYITFSLLGVPFAM
LLAVATGLSVIIPYVGAFVMTVPVALIAYFHFGVSQELVYVLVAYTIIQVLDGNVLVPLLFSEVVNLHPVAIIVSILVFG
GIWGFWGIFFAIPLATFIQAIIKAWVRRRKPPDDESAGVEEELVP

Sequences:

>Translated_365_residues
MELIRSWLRRTFNDPQIAAFIVLMVVGLGALLMLGSILAPVIAAVVIAYLLEGVVRGFERAGVPRMLAVVIVILFLTTFL
VLVLFALIPLLYRQVGQLVDQLPAILAQGQMLLLQLPEHYPQLFSEAQIREMLDTARREITDLGQRVVASVTVQSLMILG
TLVIYAVLVPFLVFFLLKDKRLLLQWVSNHMPRHRAFASEVWLDVDQQIGNYVRGKFIEILIVWAVTYITFSLLGVPFAM
LLAVATGLSVIIPYVGAFVMTVPVALIAYFHFGVSQELVYVLVAYTIIQVLDGNVLVPLLFSEVVNLHPVAIIVSILVFG
GIWGFWGIFFAIPLATFIQAIIKAWVRRRKPPDDESAGVEEELVP
>Mature_365_residues
MELIRSWLRRTFNDPQIAAFIVLMVVGLGALLMLGSILAPVIAAVVIAYLLEGVVRGFERAGVPRMLAVVIVILFLTTFL
VLVLFALIPLLYRQVGQLVDQLPAILAQGQMLLLQLPEHYPQLFSEAQIREMLDTARREITDLGQRVVASVTVQSLMILG
TLVIYAVLVPFLVFFLLKDKRLLLQWVSNHMPRHRAFASEVWLDVDQQIGNYVRGKFIEILIVWAVTYITFSLLGVPFAM
LLAVATGLSVIIPYVGAFVMTVPVALIAYFHFGVSQELVYVLVAYTIIQVLDGNVLVPLLFSEVVNLHPVAIIVSILVFG
GIWGFWGIFFAIPLATFIQAIIKAWVRRRKPPDDESAGVEEELVP

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=357, Percent_Identity=43.1372549019608, Blast_Score=296, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40689; Mature: 40689

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIRSWLRRTFNDPQIAAFIVLMVVGLGALLMLGSILAPVIAAVVIAYLLEGVVRGFER
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVPRMLAVVIVILFLTTFLVLVLFALIPLLYRQVGQLVDQLPAILAQGQMLLLQLPEHY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
PQLFSEAQIREMLDTARREITDLGQRVVASVTVQSLMILGTLVIYAVLVPFLVFFLLKDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLLQWVSNHMPRHRAFASEVWLDVDQQIGNYVRGKFIEILIVWAVTYITFSLLGVPFAM
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVATGLSVIIPYVGAFVMTVPVALIAYFHFGVSQELVYVLVAYTIIQVLDGNVLVPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHH
FSEVVNLHPVAIIVSILVFGGIWGFWGIFFAIPLATFIQAIIKAWVRRRKPPDDESAGVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EELVP
CCCCC
>Mature Secondary Structure
MELIRSWLRRTFNDPQIAAFIVLMVVGLGALLMLGSILAPVIAAVVIAYLLEGVVRGFER
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVPRMLAVVIVILFLTTFLVLVLFALIPLLYRQVGQLVDQLPAILAQGQMLLLQLPEHY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
PQLFSEAQIREMLDTARREITDLGQRVVASVTVQSLMILGTLVIYAVLVPFLVFFLLKDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLLQWVSNHMPRHRAFASEVWLDVDQQIGNYVRGKFIEILIVWAVTYITFSLLGVPFAM
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVATGLSVIIPYVGAFVMTVPVALIAYFHFGVSQELVYVLVAYTIIQVLDGNVLVPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHH
FSEVVNLHPVAIIVSILVFGGIWGFWGIFFAIPLATFIQAIIKAWVRRRKPPDDESAGVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EELVP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]