| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998965
Identifier: 121998965
GI number: 121998965
Start: 2399840
End: 2400052
Strand: Reverse
Name: 121998965
Synonym: Hhal_2186
Alternate gene names: NA
Gene position: 2400052-2399840 (Counterclockwise)
Preceding gene: 121998966
Following gene: 121998964
Centisome position: 89.61
GC content: 66.67
Gene sequence:
>213_bases ATGGAAACGGTCAGAATCCGGATTGAGGGCATGAGCTGCGCCCATTGCGAGGCCTCGGTACGTGAGGCCCTGGAGAGCCT GCCCGGGGTGGAGCGGGTGGTCAGCGTCAGCGCCGAGGACGACGAGGCCGCCGTGGAGGGACGCCCCGATCCGGCCATGG TCGCTCAGCGCCTGGAAGAGCTGGGCTTCACCGGTATGGTTACCGACGACTAA
Upstream 100 bases:
>100_bases AAGGCCCACAACGAGCGCGAAGAGATGCTTCACCACCTGCGCGAACTGCACGCCAAGGTCGATAAGCTGGAGCAACGGAT CCAAGCAGACGGAGCAAGTC
Downstream 100 bases:
>100_bases GCGCCCCAACATCCGGGCGCGAGGAGGCCGAATGGCCGAGGCGCGCATCGAGCTCAGCGTCGAGGGGATGTCCTGCGCCT CTTGTGTGGCGCGGGTGGAA
Product: heavy metal transport/detoxification protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues METVRIRIEGMSCAHCEASVREALESLPGVERVVSVSAEDDEAAVEGRPDPAMVAQRLEELGFTGMVTDD
Sequences:
>Translated_70_residues METVRIRIEGMSCAHCEASVREALESLPGVERVVSVSAEDDEAAVEGRPDPAMVAQRLEELGFTGMVTDD >Mature_70_residues METVRIRIEGMSCAHCEASVREALESLPGVERVVSVSAEDDEAAVEGRPDPAMVAQRLEELGFTGMVTDD
Specific function: Unknown
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7550; Mature: 7550
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: PS01047 HMA_1 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METVRIRIEGMSCAHCEASVREALESLPGVERVVSVSAEDDEAAVEGRPDPAMVAQRLEE CCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCCCHHHHHHHHHH LGFTGMVTDD CCCCCEEECC >Mature Secondary Structure METVRIRIEGMSCAHCEASVREALESLPGVERVVSVSAEDDEAAVEGRPDPAMVAQRLEE CCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCCCHHHHHHHHHH LGFTGMVTDD CCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA