| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998948
Identifier: 121998948
GI number: 121998948
Start: 2382414
End: 2382707
Strand: Reverse
Name: 121998948
Synonym: Hhal_2169
Alternate gene names: NA
Gene position: 2382707-2382414 (Counterclockwise)
Preceding gene: 121998949
Following gene: 121998947
Centisome position: 88.96
GC content: 72.45
Gene sequence:
>294_bases ATGGCGGCCGATCAGCCGATCGAGTTGGGCGAGCAACTCGACATCACCGTAGCGACAACCCTCAAAGAGACGCTTAGCGA CGCGCTGGCCTCCGGGCAGCCGGTCACGCTGGACGGTGCGCGGCTGCAACGGGTCGACGCCGCCGGCGTGCAGCTGCTGG CCGCCTTCGCGCGGGCGGCGACGAGCCGTTCCGGCTGGTCGTGGCAAGGCGGGGGGGCGCCGGCCCCGGTCGCCGAGGCT GCCGCTGATCTTGGCCTGGCTGATGAACTCGGGTCCGGCGGCGCAGCCCGCTAA
Upstream 100 bases:
>100_bases TACAACGGGGAGGCATGCCATTCAAGTGAATGCCGGCTCTTGCCGTTAACGACAATGACGGGCAATCTGCAAGGACAACC GGCAAGCGCGTAGGGAAATC
Downstream 100 bases:
>100_bases CCCAGACAGACGAAGGGAACGAGACGATGGCGAAGATCCTGGCGGTCGATGATTCCGCCTCCATGCGGCAGATGGTGACC TACACCCTCAAGCAGCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MAADQPIELGEQLDITVATTLKETLSDALASGQPVTLDGARLQRVDAAGVQLLAAFARAATSRSGWSWQGGGAPAPVAEA AADLGLADELGSGGAAR
Sequences:
>Translated_97_residues MAADQPIELGEQLDITVATTLKETLSDALASGQPVTLDGARLQRVDAAGVQLLAAFARAATSRSGWSWQGGGAPAPVAEA AADLGLADELGSGGAAR >Mature_96_residues AADQPIELGEQLDITVATTLKETLSDALASGQPVTLDGARLQRVDAAGVQLLAAFARAATSRSGWSWQGGGAPAPVAEAA ADLGLADELGSGGAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9644; Mature: 9513
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADQPIELGEQLDITVATTLKETLSDALASGQPVTLDGARLQRVDAAGVQLLAAFARAA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH TSRSGWSWQGGGAPAPVAEAAADLGLADELGSGGAAR CCCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCC >Mature Secondary Structure AADQPIELGEQLDITVATTLKETLSDALASGQPVTLDGARLQRVDAAGVQLLAAFARAA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH TSRSGWSWQGGGAPAPVAEAAADLGLADELGSGGAAR CCCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA