| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is cheA [H]
Identifier: 121998946
GI number: 121998946
Start: 2379876
End: 2381987
Strand: Reverse
Name: cheA [H]
Synonym: Hhal_2167
Alternate gene names: 121998946
Gene position: 2381987-2379876 (Counterclockwise)
Preceding gene: 121998947
Following gene: 121998945
Centisome position: 88.93
GC content: 66.76
Gene sequence:
>2112_bases ATGAGCGTAGACCTGAGCCAGTTCCTGCAGACCTTCTTCGAGGAGAGCTTCGAGGGGCTGGATACCATGGAGTCGGGCCT GCTGGAACTCGATCCAGAGAGCCCGGATCCCGAGGCCCTCAACAACGTCTTCCGCGCGGCCCACTCCATCAAGGGGGGCG CCGGAACCTTCGGTCTCAGCGCGGTCTCGGACTTCACCCACCGCATGGAGACCCTGCTCGATCGACTGCGTGACGGCAAA CAGGCGGTTACGCCCGACTGCGTCAATGTGTTGCTGAATGCCGTCGATTGCCTGCGAGGCATGCTGGTGGCGATCCAGAG TGACCAAACCCTGGACGCCGACGCGATCAGCACTGCCCAGCAGCGGCTCGACGAGCAGCTCGGGCAGGCACCCGTGGGCG GTGGGGGGGCGACCGGCGCCGCGGCCGGACCGACAGCCGGCGGCGGTGATGCCGGCGGTGACGATGCGCCGCCGCCCCGC GGGGGAGGCGGCGGCGGCGGCTGGTTGATTCGCTTCGAGCCGCAGCCCCACCTGTTCGCCACGGGCAACGACCCGCGTCG GCTCTTCTTGGCCCTCCAGGATCTCGGCGAGCTTGAGGTCGAATGCGACACCTCGGGTTTGCCGCCCTTCGAGCAGCTCG ATCCGGAAACCTGTCAGCTGGCTTGGACCCTGCGCCTCTACGCCGACGTGCCCGAGGCGGCGGTGCGCGAGGTCTTCGAG TGGGTCGAGGACGATGCCCGGCTCGAGATCCAGCCCCTGGAGGCCGCAGGTACCGAGGAGGTAGCTCCGGTAGCACCCGG GCAGCCCCCGATGCCGACCTCTGAGGAGAGTGGCCCTGCGGCGCCCGCAGCCGGCGGTGGCGAAGCGCGCAAGCCGGCCG CACGCCGTGGGGGAGGGAATAGCTCCATCCGGGTGGATACCGAGAAGATCGACGCCCTCATCGATATGGTCGGTGAGCTG GTGATCACCCAGTCGATGCTCAGCCAGGTCGGCAAGGAGTTCACCGCCGAGCGCCTGGAAGAACTCCAGGACGGCCTGGC GCAGCTCGAGCGCAACACGCGCGAACTGCAAGAGAACGTCATGCGCATCCGCATGGTGCCAATCAGCTTCGCCTACTCGC GGCTGCCGCGCATCGTCCACGACACCAGCCGCGCCCTGGGCAAGGCCGTCGACTTCCAGATGGAGGGCGAGCAGACCGAG CTGGACAAGACGGTGATGGAGAAGATCATCGATCCGCTGGTCCATCTGGTCCGCAACAGCGTCGACCACGGCATCGAGCC GCCGGAGGAGCGGGCCGCTGCCGGCAAGCCCGAGACCGGCACCATCACCATCGAGGCCTACCACAAGGGCGGCAATATCA TCATCGAGATCGCCGATGATGGTCGCGGCATCAATCGCGACAAGCTGCTGGCCAAGGCGCGCAGCTCCGGGCTGCTCGAG GACGGCACCGAACTGCCCGATGACCAGGTCTTCGACCTGATCTTCCATCCCGGGCTCTCCACTCATGAGCAGGCCACCGA ATACTCCGGCCGGGGTGTGGGGATGGATGTGGTCAAGCGCAACGTCCGCTCCCTGTCCGGCAATATCCATGTGCGCTCAG CTCAAGGGCAGGGCACGACCATCACCATCTCGCTGCCGCTGACCCTCTCGATCCTGGACGGCCAGCTGTTCCGGGTAGGC GACCAGACCTACATCGTGCCGCTGGTTTCGGTCATCGAGTCGCTCCAAGTCGACGGCAGCAAGCTCAGCCGGGTTACCGG CCGGGGCGAGGTCTACCACTGGCGCGAGGGGTACGTCCCCATCGTGCGCCTCCACGAGCTCTTCGACACCGAACCGGTTC GCCGCGAGCTCGCCGGTGGGCTGATGGTGATCGTCGAGGACGAAGACACCTACCTGGGAGTCTTTGTCGACGACCTCCTT GATCAGCAGCAGGTGGTCATCAAGAGCCTGGAGGCCAACTACCTGCAGGTGCCCGGCATCGCTGGCGCCACCATCCTCGG CGACGGCACCGTGGCCCTGATCCTCGATATCGCCGGGCTCATCGAGATGAGCCGCGGTGGCCGTCGTCAGCCCTACATCC CCACCCCGGAGGACAGCGATGAGGCCGCCTGA
Upstream 100 bases:
>100_bases TGGTTGGTCAAGCCCTTCGACCCGGATCAGCTGGTCAACACCATCAAGAAGGTGGTGCGCTGACGGCCCGGGCCCTGAGC GCCCAACGGGGGGGCGAGCG
Downstream 100 bases:
>100_bases AGCATCCATCCCCGGGATCCCCCAGTTGCGAAGCGGAGAGCAGTCATGACCCAGGACAGCGAGCACGGCACCCTCGGAGA CGACCGCAAGGCAGCCGCAC
Product: CheA signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 703; Mature: 702
Protein sequence:
>703_residues MSVDLSQFLQTFFEESFEGLDTMESGLLELDPESPDPEALNNVFRAAHSIKGGAGTFGLSAVSDFTHRMETLLDRLRDGK QAVTPDCVNVLLNAVDCLRGMLVAIQSDQTLDADAISTAQQRLDEQLGQAPVGGGGATGAAAGPTAGGGDAGGDDAPPPR GGGGGGGWLIRFEPQPHLFATGNDPRRLFLALQDLGELEVECDTSGLPPFEQLDPETCQLAWTLRLYADVPEAAVREVFE WVEDDARLEIQPLEAAGTEEVAPVAPGQPPMPTSEESGPAAPAAGGGEARKPAARRGGGNSSIRVDTEKIDALIDMVGEL VITQSMLSQVGKEFTAERLEELQDGLAQLERNTRELQENVMRIRMVPISFAYSRLPRIVHDTSRALGKAVDFQMEGEQTE LDKTVMEKIIDPLVHLVRNSVDHGIEPPEERAAAGKPETGTITIEAYHKGGNIIIEIADDGRGINRDKLLAKARSSGLLE DGTELPDDQVFDLIFHPGLSTHEQATEYSGRGVGMDVVKRNVRSLSGNIHVRSAQGQGTTITISLPLTLSILDGQLFRVG DQTYIVPLVSVIESLQVDGSKLSRVTGRGEVYHWREGYVPIVRLHELFDTEPVRRELAGGLMVIVEDEDTYLGVFVDDLL DQQQVVIKSLEANYLQVPGIAGATILGDGTVALILDIAGLIEMSRGGRRQPYIPTPEDSDEAA
Sequences:
>Translated_703_residues MSVDLSQFLQTFFEESFEGLDTMESGLLELDPESPDPEALNNVFRAAHSIKGGAGTFGLSAVSDFTHRMETLLDRLRDGK QAVTPDCVNVLLNAVDCLRGMLVAIQSDQTLDADAISTAQQRLDEQLGQAPVGGGGATGAAAGPTAGGGDAGGDDAPPPR GGGGGGGWLIRFEPQPHLFATGNDPRRLFLALQDLGELEVECDTSGLPPFEQLDPETCQLAWTLRLYADVPEAAVREVFE WVEDDARLEIQPLEAAGTEEVAPVAPGQPPMPTSEESGPAAPAAGGGEARKPAARRGGGNSSIRVDTEKIDALIDMVGEL VITQSMLSQVGKEFTAERLEELQDGLAQLERNTRELQENVMRIRMVPISFAYSRLPRIVHDTSRALGKAVDFQMEGEQTE LDKTVMEKIIDPLVHLVRNSVDHGIEPPEERAAAGKPETGTITIEAYHKGGNIIIEIADDGRGINRDKLLAKARSSGLLE DGTELPDDQVFDLIFHPGLSTHEQATEYSGRGVGMDVVKRNVRSLSGNIHVRSAQGQGTTITISLPLTLSILDGQLFRVG DQTYIVPLVSVIESLQVDGSKLSRVTGRGEVYHWREGYVPIVRLHELFDTEPVRRELAGGLMVIVEDEDTYLGVFVDDLL DQQQVVIKSLEANYLQVPGIAGATILGDGTVALILDIAGLIEMSRGGRRQPYIPTPEDSDEAA >Mature_702_residues SVDLSQFLQTFFEESFEGLDTMESGLLELDPESPDPEALNNVFRAAHSIKGGAGTFGLSAVSDFTHRMETLLDRLRDGKQ AVTPDCVNVLLNAVDCLRGMLVAIQSDQTLDADAISTAQQRLDEQLGQAPVGGGGATGAAAGPTAGGGDAGGDDAPPPRG GGGGGGWLIRFEPQPHLFATGNDPRRLFLALQDLGELEVECDTSGLPPFEQLDPETCQLAWTLRLYADVPEAAVREVFEW VEDDARLEIQPLEAAGTEEVAPVAPGQPPMPTSEESGPAAPAAGGGEARKPAARRGGGNSSIRVDTEKIDALIDMVGELV ITQSMLSQVGKEFTAERLEELQDGLAQLERNTRELQENVMRIRMVPISFAYSRLPRIVHDTSRALGKAVDFQMEGEQTEL DKTVMEKIIDPLVHLVRNSVDHGIEPPEERAAAGKPETGTITIEAYHKGGNIIIEIADDGRGINRDKLLAKARSSGLLED GTELPDDQVFDLIFHPGLSTHEQATEYSGRGVGMDVVKRNVRSLSGNIHVRSAQGQGTTITISLPLTLSILDGQLFRVGD QTYIVPLVSVIESLQVDGSKLSRVTGRGEVYHWREGYVPIVRLHELFDTEPVRRELAGGLMVIVEDEDTYLGVFVDDLLD QQQVVIKSLEANYLQVPGIAGATILGDGTVALILDIAGLIEMSRGGRRQPYIPTPEDSDEAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=689, Percent_Identity=41.944847605225, Blast_Score=488, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR015162 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF01584 CheW; PF09078 CheY-binding; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 75636; Mature: 75505
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDLSQFLQTFFEESFEGLDTMESGLLELDPESPDPEALNNVFRAAHSIKGGAGTFGLS CCCCHHHHHHHHHHHHHCCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHH AVSDFTHRMETLLDRLRDGKQAVTPDCVNVLLNAVDCLRGMLVAIQSDQTLDADAISTAQ HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHH QRLDEQLGQAPVGGGGATGAAAGPTAGGGDAGGDDAPPPRGGGGGGGWLIRFEPQPHLFA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEE TGNDPRRLFLALQDLGELEVECDTSGLPPFEQLDPETCQLAWTLRLYADVPEAAVREVFE CCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCEEEEEEEEEECCCCHHHHHHHHH WVEDDARLEIQPLEAAGTEEVAPVAPGQPPMPTSEESGPAAPAAGGGEARKPAARRGGGN HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC SSIRVDTEKIDALIDMVGELVITQSMLSQVGKEFTAERLEELQDGLAQLERNTRELQENV CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRIRMVPISFAYSRLPRIVHDTSRALGKAVDFQMEGEQTELDKTVMEKIIDPLVHLVRNS HEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHH VDHGIEPPEERAAAGKPETGTITIEAYHKGGNIIIEIADDGRGINRDKLLAKARSSGLLE HHCCCCCCHHHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC DGTELPDDQVFDLIFHPGLSTHEQATEYSGRGVGMDVVKRNVRSLSGNIHVRSAQGQGTT CCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCE ITISLPLTLSILDGQLFRVGDQTYIVPLVSVIESLQVDGSKLSRVTGRGEVYHWREGYVP EEEEECEEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCH IVRLHELFDTEPVRRELAGGLMVIVEDEDTYLGVFVDDLLDQQQVVIKSLEANYLQVPGI HHHHHHHHCCCHHHHHHCCCEEEEEECCCCEEEEEHHHHHCHHHHHHHHHCCCEEECCCC AGATILGDGTVALILDIAGLIEMSRGGRRQPYIPTPEDSDEAA CCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVDLSQFLQTFFEESFEGLDTMESGLLELDPESPDPEALNNVFRAAHSIKGGAGTFGLS CCCHHHHHHHHHHHHHCCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHH AVSDFTHRMETLLDRLRDGKQAVTPDCVNVLLNAVDCLRGMLVAIQSDQTLDADAISTAQ HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHH QRLDEQLGQAPVGGGGATGAAAGPTAGGGDAGGDDAPPPRGGGGGGGWLIRFEPQPHLFA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEE TGNDPRRLFLALQDLGELEVECDTSGLPPFEQLDPETCQLAWTLRLYADVPEAAVREVFE CCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCEEEEEEEEEECCCCHHHHHHHHH WVEDDARLEIQPLEAAGTEEVAPVAPGQPPMPTSEESGPAAPAAGGGEARKPAARRGGGN HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC SSIRVDTEKIDALIDMVGELVITQSMLSQVGKEFTAERLEELQDGLAQLERNTRELQENV CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRIRMVPISFAYSRLPRIVHDTSRALGKAVDFQMEGEQTELDKTVMEKIIDPLVHLVRNS HEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHH VDHGIEPPEERAAAGKPETGTITIEAYHKGGNIIIEIADDGRGINRDKLLAKARSSGLLE HHCCCCCCHHHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC DGTELPDDQVFDLIFHPGLSTHEQATEYSGRGVGMDVVKRNVRSLSGNIHVRSAQGQGTT CCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCE ITISLPLTLSILDGQLFRVGDQTYIVPLVSVIESLQVDGSKLSRVTGRGEVYHWREGYVP EEEEECEEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCH IVRLHELFDTEPVRRELAGGLMVIVEDEDTYLGVFVDDLLDQQQVVIKSLEANYLQVPGI HHHHHHHHCCCHHHHHHCCCEEEEEECCCCEEEEEHHHHHCHHHHHHHHHCCCEEECCCC AGATILGDGTVALILDIAGLIEMSRGGRRQPYIPTPEDSDEAA CCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2002011; 9097040; 9278503; 3510184; 2832069; 2068106; 8555213; 8639521; 9020767; 9437425; 9636149 [H]