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The map label for this gene is tse [H]

Identifier: 121998942

GI number: 121998942

Start: 2375120

End: 2376952

Strand: Reverse

Name: tse [H]

Synonym: Hhal_2163

Alternate gene names: 121998942

Gene position: 2376952-2375120 (Counterclockwise)

Preceding gene: 121998943

Following gene: 121998941

Centisome position: 88.74

GC content: 66.61

Gene sequence:

>1833_bases
ATGAAGGACGACACGGAACAGCCGCCGGCCTCGGCGGCGCAGACGGACGAAGAGACGGCTGGGGCACCGGACCACCAGGC
AGCGCACACGGAGTCGGATAGTGGGGGCACCACCATGGCGGGCAGCGACCAAAAGCGAACGATCACCGTCGACCGGGCGG
AGTACATCGAGTATTACCGTGCCAAGCTGGCCATGCATACGGCGACCACGGCCTTCCTGATGACCAATTCGGACGGCACG
ATCCACTACGTCAATGAGCCCATGCAGAAGATGCTGGAGCACTACGCGGATCAGATCGCCGCGGTCAATCCCGGGTTCAC
GACCAAGAACCTGGAGGACCAGCGCTCGCTGTTCGACGTGATCCCGCAGCTGCAGTCGCTGGCGAGCCAGATGAAGCGTG
TCCGCGAGGACGCCCTGCAACAGGAGCTGCACATCGGCGAGCTGCGTTTCAACGTCTATATCACCGGCGAGGACGACGAG
GAGGGCAACTTCCTCGGCAACACCCTCGAGTGGTTCGACATCACCGAGGACTGGCACCGGCGCGCCAACGAGAAGAAGGC
GCAGCACGATGTCGAGGCGCTGATCGAGCGTATCCAGAACGGCGAGCTCAGTCACCGGGTGGAGACCTCGAGCATGTCCG
AGGGGTTCATCCGCACCCTGAGCGAGGACATCAACATGGTCCTCGACGTCACTCAGGCCCCGGTGCGCGAGGTGATCCGG
GTGATGGAGAAGGTCGCCAACGGCGATCTGGCTCAGCACATGGACGGCGATTTCAAGGGCGACTTCGGCCAGCTGCAGGC
CTGGGTCAACTCGACCGTCGACGTGCTGCGGCGGACGGTGGACGAGGTCCGCGAGACGGCGGAGAGCATCGACTCGGCGT
CCTCGGAGATCGCCCAGGGCAACCAGGATCTCTCCCAGCGTACCGAGGAGCAGGCCAGCTCCCTGGAGGAGACCGCCTCG
AGCATCGAGGAGCTCACCTCGACGGTGAAGCAGACCGCGGACAACGCCCGCGAGTCGAATCAGCTCGCCACGGCGGCCCG
CGAGCGGGCCGAGCGCGGCCAGCAGATCTCCGGTCAGGTGGTCGAGGCGATGGGCGCGATCAAGCAGTCGAGCCGCGAGA
TCTCGGACATCATCACGGTGATCGACGAGATCGCCTTCCAGACCAATCTGCTGGCGCTCAACGCAGCCGTCGAGGCCGCC
CGGGCCGGTGAGCACGGCCGCGGGTTCGGCGTGGTCGCCGCAGAAGTCCGTAACCTCGCCCAGCGCAGTGCCACCGCGGC
CAAGGACATCAAGCGTCTGATCAACGATAGCGGCGAGAAGGTCGAGGACGGTACCCGCCTGGTCAACGAGTCCAATGAGA
CCCTCAAGGAGATCCTCGAGGCGGTTCAGACGGTCACCGACAAGGTGGCGGAGATCTCCGCGGCCAGCGAGGAGCAGTCT
TCGGGGATCGACGAGATCAACAAAGCGGTCAGCCAGCTCGACGAGGTCACCCAACAGAACGCCGCGCTGGTCGAGGAGGC
CGCGTCGGCCGCCGAGTCCCTGGACGAGCAGTCCACCAACCTGGTCCAGCTGATGGCCTTCTTCGGCGGTGCCGATCAGG
CGGTGGCCAAGGCCAAGAGCTCGGCCAGCCGGCCGACGCGGAGCAGCGGCGGGCAGTCGGGCCAGGCGGCGCGGCCGGCC
GGGGGCAGTGGCCAACGGTCGAGCCAGGGTGGCAGCAGCGGGGGTCACCGCGGCGGCTCCGGCGCTTCCGCTTCGTCCAC
CCCTCGCCCTTCTGCCGGTGCGCAGAAGCGCCAGACGGCGGACGTGGAGGACAGCGAGTGGGAAGAGTTCTGA

Upstream 100 bases:

>100_bases
CTCGAGCCGGCGGCGGCCGAGTAGAGGAGGAGCAGCCGTGGCGAAAAGCGGTGGATCCAACGGCGACAACAAGAAGCTGG
GCCGCGACCCGTTGGCCTGG

Downstream 100 bases:

>100_bases
GGCGGAGAGTGCGGTTTTGATGCGCAGCGCAGCAATCGGCCAGGAGGGCCACCGTGGGCGGTGAGCGTGAGTTTCGCTTT
ACCCGCGAGGACTTCGAATG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MKDDTEQPPASAAQTDEETAGAPDHQAAHTESDSGGTTMAGSDQKRTITVDRAEYIEYYRAKLAMHTATTAFLMTNSDGT
IHYVNEPMQKMLEHYADQIAAVNPGFTTKNLEDQRSLFDVIPQLQSLASQMKRVREDALQQELHIGELRFNVYITGEDDE
EGNFLGNTLEWFDITEDWHRRANEKKAQHDVEALIERIQNGELSHRVETSSMSEGFIRTLSEDINMVLDVTQAPVREVIR
VMEKVANGDLAQHMDGDFKGDFGQLQAWVNSTVDVLRRTVDEVRETAESIDSASSEIAQGNQDLSQRTEEQASSLEETAS
SIEELTSTVKQTADNARESNQLATAARERAERGQQISGQVVEAMGAIKQSSREISDIITVIDEIAFQTNLLALNAAVEAA
RAGEHGRGFGVVAAEVRNLAQRSATAAKDIKRLINDSGEKVEDGTRLVNESNETLKEILEAVQTVTDKVAEISAASEEQS
SGIDEINKAVSQLDEVTQQNAALVEEAASAAESLDEQSTNLVQLMAFFGGADQAVAKAKSSASRPTRSSGGQSGQAARPA
GGSGQRSSQGGSSGGHRGGSGASASSTPRPSAGAQKRQTADVEDSEWEEF

Sequences:

>Translated_610_residues
MKDDTEQPPASAAQTDEETAGAPDHQAAHTESDSGGTTMAGSDQKRTITVDRAEYIEYYRAKLAMHTATTAFLMTNSDGT
IHYVNEPMQKMLEHYADQIAAVNPGFTTKNLEDQRSLFDVIPQLQSLASQMKRVREDALQQELHIGELRFNVYITGEDDE
EGNFLGNTLEWFDITEDWHRRANEKKAQHDVEALIERIQNGELSHRVETSSMSEGFIRTLSEDINMVLDVTQAPVREVIR
VMEKVANGDLAQHMDGDFKGDFGQLQAWVNSTVDVLRRTVDEVRETAESIDSASSEIAQGNQDLSQRTEEQASSLEETAS
SIEELTSTVKQTADNARESNQLATAARERAERGQQISGQVVEAMGAIKQSSREISDIITVIDEIAFQTNLLALNAAVEAA
RAGEHGRGFGVVAAEVRNLAQRSATAAKDIKRLINDSGEKVEDGTRLVNESNETLKEILEAVQTVTDKVAEISAASEEQS
SGIDEINKAVSQLDEVTQQNAALVEEAASAAESLDEQSTNLVQLMAFFGGADQAVAKAKSSASRPTRSSGGQSGQAARPA
GGSGQRSSQGGSSGGHRGGSGASASSTPRPSAGAQKRQTADVEDSEWEEF
>Mature_610_residues
MKDDTEQPPASAAQTDEETAGAPDHQAAHTESDSGGTTMAGSDQKRTITVDRAEYIEYYRAKLAMHTATTAFLMTNSDGT
IHYVNEPMQKMLEHYADQIAAVNPGFTTKNLEDQRSLFDVIPQLQSLASQMKRVREDALQQELHIGELRFNVYITGEDDE
EGNFLGNTLEWFDITEDWHRRANEKKAQHDVEALIERIQNGELSHRVETSSMSEGFIRTLSEDINMVLDVTQAPVREVIR
VMEKVANGDLAQHMDGDFKGDFGQLQAWVNSTVDVLRRTVDEVRETAESIDSASSEIAQGNQDLSQRTEEQASSLEETAS
SIEELTSTVKQTADNARESNQLATAARERAERGQQISGQVVEAMGAIKQSSREISDIITVIDEIAFQTNLLALNAAVEAA
RAGEHGRGFGVVAAEVRNLAQRSATAAKDIKRLINDSGEKVEDGTRLVNESNETLKEILEAVQTVTDKVAEISAASEEQS
SGIDEINKAVSQLDEVTQQNAALVEEAASAAESLDEQSTNLVQLMAFFGGADQAVAKAKSSASRPTRSSGGQSGQAARPA
GGSGQRSSQGGSSGGHRGGSGASASSTPRPSAGAQKRQTADVEDSEWEEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=312, Percent_Identity=51.6025641025641, Blast_Score=270, Evalue=2e-73,
Organism=Escherichia coli, GI2367378, Length=268, Percent_Identity=55.5970149253731, Blast_Score=268, Evalue=7e-73,
Organism=Escherichia coli, GI1787690, Length=354, Percent_Identity=45.4802259887006, Blast_Score=259, Evalue=3e-70,
Organism=Escherichia coli, GI1788194, Length=299, Percent_Identity=48.494983277592, Blast_Score=245, Evalue=7e-66,
Organism=Escherichia coli, GI1789453, Length=247, Percent_Identity=37.6518218623482, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 65968; Mature: 65968

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDDTEQPPASAAQTDEETAGAPDHQAAHTESDSGGTTMAGSDQKRTITVDRAEYIEYYR
CCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHH
AKLAMHTATTAFLMTNSDGTIHYVNEPMQKMLEHYADQIAAVNPGFTTKNLEDQRSLFDV
HHHHHHHHHEEEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
IPQLQSLASQMKRVREDALQQELHIGELRFNVYITGEDDEEGNFLGNTLEWFDITEDWHR
HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCHHHHCCCHHHHH
RANEKKAQHDVEALIERIQNGELSHRVETSSMSEGFIRTLSEDINMVLDVTQAPVREVIR
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMEKVANGDLAQHMDGDFKGDFGQLQAWVNSTVDVLRRTVDEVRETAESIDSASSEIAQG
HHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NQDLSQRTEEQASSLEETASSIEELTSTVKQTADNARESNQLATAARERAERGQQISGQV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VEAMGAIKQSSREISDIITVIDEIAFQTNLLALNAAVEAARAGEHGRGFGVVAAEVRNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
QRSATAAKDIKRLINDSGEKVEDGTRLVNESNETLKEILEAVQTVTDKVAEISAASEEQS
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
SGIDEINKAVSQLDEVTQQNAALVEEAASAAESLDEQSTNLVQLMAFFGGADQAVAKAKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SASRPTRSSGGQSGQAARPAGGSGQRSSQGGSSGGHRGGSGASASSTPRPSAGAQKRQTA
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
DVEDSEWEEF
CCCCCCCCCC
>Mature Secondary Structure
MKDDTEQPPASAAQTDEETAGAPDHQAAHTESDSGGTTMAGSDQKRTITVDRAEYIEYYR
CCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHH
AKLAMHTATTAFLMTNSDGTIHYVNEPMQKMLEHYADQIAAVNPGFTTKNLEDQRSLFDV
HHHHHHHHHEEEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
IPQLQSLASQMKRVREDALQQELHIGELRFNVYITGEDDEEGNFLGNTLEWFDITEDWHR
HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCHHHHCCCHHHHH
RANEKKAQHDVEALIERIQNGELSHRVETSSMSEGFIRTLSEDINMVLDVTQAPVREVIR
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMEKVANGDLAQHMDGDFKGDFGQLQAWVNSTVDVLRRTVDEVRETAESIDSASSEIAQG
HHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NQDLSQRTEEQASSLEETASSIEELTSTVKQTADNARESNQLATAARERAERGQQISGQV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VEAMGAIKQSSREISDIITVIDEIAFQTNLLALNAAVEAARAGEHGRGFGVVAAEVRNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
QRSATAAKDIKRLINDSGEKVEDGTRLVNESNETLKEILEAVQTVTDKVAEISAASEEQS
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
SGIDEINKAVSQLDEVTQQNAALVEEAASAAESLDEQSTNLVQLMAFFGGADQAVAKAKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SASRPTRSSGGQSGQAARPAGGSGQRSSQGGSSGGHRGGSGASASSTPRPSAGAQKRQTA
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
DVEDSEWEEF
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]