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The map label for this gene is 121998696

Identifier: 121998696

GI number: 121998696

Start: 2112063

End: 2114426

Strand: Reverse

Name: 121998696

Synonym: Hhal_1917

Alternate gene names: NA

Gene position: 2114426-2112063 (Counterclockwise)

Preceding gene: 121998697

Following gene: 121998695

Centisome position: 78.94

GC content: 70.47

Gene sequence:

>2364_bases
GTGACCGCGCTGACCCGCAAGCTGCTGCGCGAACTGGGGCTCATGCGCGGCCAGGTGATCGCCATCGCGGTGGTCATCGC
CGGCGGGGTGGCGACGCTGATGATGTTTCTCACCGCGCTCTTCGCCCTGACCGACACCCGCGACGCCTTCTATCAGGAGT
ACCGCTTCGCCGATCTCTTCGCCGCCGCCGAACGGGCGCCGCGGGGTCTGGTGGAGGAGATCGGGGGCATCGACGGCGTC
CAGCGGGTCGAGGACCGCGTGGTCGCGGCGGCCAACCTGGACGTCCCCGGCTACGACAACCCGGTGACCGGGCGCATCCT
CTCCCTGCCCGAGGGTCGGCAGCCGGACATGAACCGCCTCCACCTGCGCCACGGTCGGCTGCCGGAGCCCGGTCGGGAGC
AGGAGGCGGTGGTCAGCGATGCCTTCGCCGAGGCCCACGGGCTGCGCCCCGGTGACGGGCTGGCGGCGGTCGTCCGCGGC
CGTTACCAGCGCCTGGAGGTGGTCGGTGTCGCGGTCTCGCCGGAGTTCATCTACCAGATCCGGCCGGGGGAGATCCTCCC
GGACTATGAGCGCTACGGCATCCTGTGGATGAATCGCCGGGCCCTGGCCGCCGCCTACGACATGGACGGCGCCTTCAACG
ACCTGTTGCTCACGCTGCAGCACGGAGCCCGGCCGGGTGACGTGATCGACGCCGTGGACCGTCTGCTCGAGCCCTGGGGC
GGGCGCGGTGCCTACGGCCGGGCGGATCAGCTCTCCCACGCACTGCTGGAGGATGAGCTGACGCAGCTCGCCAACCTCGC
CTATGTGCTCCCGGCGATCTTCCTCGGTGTGGCGGCCTTCCTGCTCAATGTCGTGGTCGGTCGCCTGATCGCCACCCAGC
GCGAGATCATCGGCACCCTGAAGGCCTTCGGCTACTCGCGCCTGGCCATCGCTACGCACTACATGCGGCTGGTGCTGCTC
ATCGTCGGCCTCGGCGTGGCCGTCGGTGTGGCCGTCGGGTATTGGCTGGGGGGGCACCTGGCCGAGCTCTACGCCGAATT
CTTCCGCTTCCCATTCCTCGAGTTCCGGCTGCAGTTGCCGGTGGTGGCCATCGCCGCCGGGGTGACCGCGGCCTCGGCGC
TGCTGGGGACCTGGATGGCGGTCCGCCGCGCCGCCCGACTGCCACCCGCGGAGGCGATGCGCCCGGAGCCACCCCCGACT
TACCGGCCTACGGTGGTCGAGCGCCTCGGTCTGCAGCGCTGGTTCAGCCAGCCCACGCGGATGATCCTGCGCGGCATCGA
GCGGCGTCCGCTGCGGGCGGTGCTGGCGACCCTGGGGATCGCCCTGGCGGTAGCGGTGCTGATGATCGGCCCCTACCAGC
GCAACGCCCTCAATACCATGATCGACGTCCAGTTCAACCTGGTGCAGCGGGATGACGTGACCGTCTCCTTCTACGAGCCG
ACATCGCGCAAGGCGTTGCACGAGCTCGCCGGTCTGCCGGGGGTGGACCGCGCCGAACCGTTCCGGCAGGTGGCGGCAGA
GGTCGCCTTCGGCCATCGTCGTCACCGGATGGCGGTGCTCGGCCTGGAGCCCGGTGCGGACCTGCGCCGCCTGCTGGATA
CCGACCTGCGCACGGTGCCGCTGCCCGAGGAAGGGGTGGTGCTCACCGACTATCTGGCCGATCAGCTTCAGGTCGGACCC
GGCGATACGTTGGAGATCCGGGTGCTTGAGGGCCGGCGGCAGACCCTGGAGGTGCCGGTCAGCGGGGTGATCGCCGAGTA
CCTGGGGGTGTCCGTTTACATGGATCTGGATGCCCTGAACCGGCTGCTCGGCGACGGCGACGCCATCTCCGGCGCCTGGC
TGGGCCTCGCCGGGCCGGAGCGCGGGGCGTTGCTGCGCGAGCTCGACCGCCGTCCGCGGGTCGCCGGGGCGACCGAGGCC
GACGCCGCCATGCGCAACTTCGAGGAGAATGTGGCCGGGACCATGATGGTCACCGCGGCGATGACCACGCTGCTTGCCGG
AGCCATCGCCTTCGGGGTGGTCTATAACAATGCGCGGATCGCGCTGGCGGAGCGCTCCCGGGAGCTGGCCAGCCTGCGGG
TGCTCGGTTTCACCCGCCGCGAGATCGCCTACCTGCTGCTCGGCGAGCAGGCTTTGCTGATCGCCGCTGCCCTGCCGGTG
GGGTTCGTCATCGGCCACTACCTTTACGCCATCATCGTCCAGGCGGCGGAGTCGGAGCTCTATCGGGTCCCCATGATCCC
GTCGCCGGCGGGCATGGCCCTGGCGACCCTGGTGATCCTCGCCGTTGCCGGCCTCTCGGCGTGGGTGGTGCGGCGCCGGC
TGGACCGGCTGGACATGGTCGAGGCCCTGAAATCGAGGGAGTAG

Upstream 100 bases:

>100_bases
ATATCGCCGCCATGGCTCACCGGGTGGTGGACTTCAAGGACGGCCTGATCGACTCGGTGCGCACCAACGATCAGCGGCGT
CGGGCGGCGGAGCTCTCCTG

Downstream 100 bases:

>100_bases
CGATGCATCCACGCTGGAAGCCCATCATCGGCTGGGCACTGACCGGTCTCGCGGTCCTCGGGCTGCTCGTCCTGCTGCTG
CGGCCGGCGCCGATCCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; Efflux ABC Transporter Permease Protein; Peptide ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; Permease Domain-Containing Protein; Antimicrobial Peptide ABC Transporter Permease; ABC-Type Antimicrobial Peptide Transport System Protein; ABC-Type Transporter; ABC-Type Transport System Permease

Number of amino acids: Translated: 787; Mature: 786

Protein sequence:

>787_residues
MTALTRKLLRELGLMRGQVIAIAVVIAGGVATLMMFLTALFALTDTRDAFYQEYRFADLFAAAERAPRGLVEEIGGIDGV
QRVEDRVVAAANLDVPGYDNPVTGRILSLPEGRQPDMNRLHLRHGRLPEPGREQEAVVSDAFAEAHGLRPGDGLAAVVRG
RYQRLEVVGVAVSPEFIYQIRPGEILPDYERYGILWMNRRALAAAYDMDGAFNDLLLTLQHGARPGDVIDAVDRLLEPWG
GRGAYGRADQLSHALLEDELTQLANLAYVLPAIFLGVAAFLLNVVVGRLIATQREIIGTLKAFGYSRLAIATHYMRLVLL
IVGLGVAVGVAVGYWLGGHLAELYAEFFRFPFLEFRLQLPVVAIAAGVTAASALLGTWMAVRRAARLPPAEAMRPEPPPT
YRPTVVERLGLQRWFSQPTRMILRGIERRPLRAVLATLGIALAVAVLMIGPYQRNALNTMIDVQFNLVQRDDVTVSFYEP
TSRKALHELAGLPGVDRAEPFRQVAAEVAFGHRRHRMAVLGLEPGADLRRLLDTDLRTVPLPEEGVVLTDYLADQLQVGP
GDTLEIRVLEGRRQTLEVPVSGVIAEYLGVSVYMDLDALNRLLGDGDAISGAWLGLAGPERGALLRELDRRPRVAGATEA
DAAMRNFEENVAGTMMVTAAMTTLLAGAIAFGVVYNNARIALAERSRELASLRVLGFTRREIAYLLLGEQALLIAAALPV
GFVIGHYLYAIIVQAAESELYRVPMIPSPAGMALATLVILAVAGLSAWVVRRRLDRLDMVEALKSRE

Sequences:

>Translated_787_residues
MTALTRKLLRELGLMRGQVIAIAVVIAGGVATLMMFLTALFALTDTRDAFYQEYRFADLFAAAERAPRGLVEEIGGIDGV
QRVEDRVVAAANLDVPGYDNPVTGRILSLPEGRQPDMNRLHLRHGRLPEPGREQEAVVSDAFAEAHGLRPGDGLAAVVRG
RYQRLEVVGVAVSPEFIYQIRPGEILPDYERYGILWMNRRALAAAYDMDGAFNDLLLTLQHGARPGDVIDAVDRLLEPWG
GRGAYGRADQLSHALLEDELTQLANLAYVLPAIFLGVAAFLLNVVVGRLIATQREIIGTLKAFGYSRLAIATHYMRLVLL
IVGLGVAVGVAVGYWLGGHLAELYAEFFRFPFLEFRLQLPVVAIAAGVTAASALLGTWMAVRRAARLPPAEAMRPEPPPT
YRPTVVERLGLQRWFSQPTRMILRGIERRPLRAVLATLGIALAVAVLMIGPYQRNALNTMIDVQFNLVQRDDVTVSFYEP
TSRKALHELAGLPGVDRAEPFRQVAAEVAFGHRRHRMAVLGLEPGADLRRLLDTDLRTVPLPEEGVVLTDYLADQLQVGP
GDTLEIRVLEGRRQTLEVPVSGVIAEYLGVSVYMDLDALNRLLGDGDAISGAWLGLAGPERGALLRELDRRPRVAGATEA
DAAMRNFEENVAGTMMVTAAMTTLLAGAIAFGVVYNNARIALAERSRELASLRVLGFTRREIAYLLLGEQALLIAAALPV
GFVIGHYLYAIIVQAAESELYRVPMIPSPAGMALATLVILAVAGLSAWVVRRRLDRLDMVEALKSRE
>Mature_786_residues
TALTRKLLRELGLMRGQVIAIAVVIAGGVATLMMFLTALFALTDTRDAFYQEYRFADLFAAAERAPRGLVEEIGGIDGVQ
RVEDRVVAAANLDVPGYDNPVTGRILSLPEGRQPDMNRLHLRHGRLPEPGREQEAVVSDAFAEAHGLRPGDGLAAVVRGR
YQRLEVVGVAVSPEFIYQIRPGEILPDYERYGILWMNRRALAAAYDMDGAFNDLLLTLQHGARPGDVIDAVDRLLEPWGG
RGAYGRADQLSHALLEDELTQLANLAYVLPAIFLGVAAFLLNVVVGRLIATQREIIGTLKAFGYSRLAIATHYMRLVLLI
VGLGVAVGVAVGYWLGGHLAELYAEFFRFPFLEFRLQLPVVAIAAGVTAASALLGTWMAVRRAARLPPAEAMRPEPPPTY
RPTVVERLGLQRWFSQPTRMILRGIERRPLRAVLATLGIALAVAVLMIGPYQRNALNTMIDVQFNLVQRDDVTVSFYEPT
SRKALHELAGLPGVDRAEPFRQVAAEVAFGHRRHRMAVLGLEPGADLRRLLDTDLRTVPLPEEGVVLTDYLADQLQVGPG
DTLEIRVLEGRRQTLEVPVSGVIAEYLGVSVYMDLDALNRLLGDGDAISGAWLGLAGPERGALLRELDRRPRVAGATEAD
AAMRNFEENVAGTMMVTAAMTTLLAGAIAFGVVYNNARIALAERSRELASLRVLGFTRREIAYLLLGEQALLIAAALPVG
FVIGHYLYAIIVQAAESELYRVPMIPSPAGMALATLVILAVAGLSAWVVRRRLDRLDMVEALKSRE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85973; Mature: 85842

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALTRKLLRELGLMRGQVIAIAVVIAGGVATLMMFLTALFALTDTRDAFYQEYRFADLF
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AAAERAPRGLVEEIGGIDGVQRVEDRVVAAANLDVPGYDNPVTGRILSLPEGRQPDMNRL
HHHHHCCHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCCCEEEECCCCCCCCCHHH
HLRHGRLPEPGREQEAVVSDAFAEAHGLRPGDGLAAVVRGRYQRLEVVGVAVSPEFIYQI
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEEEEEECHHEEEEE
RPGEILPDYERYGILWMNRRALAAAYDMDGAFNDLLLTLQHGARPGDVIDAVDRLLEPWG
CCCCCCCCHHHCCEEEECCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
GRGAYGRADQLSHALLEDELTQLANLAYVLPAIFLGVAAFLLNVVVGRLIATQREIIGTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAFGYSRLAIATHYMRLVLLIVGLGVAVGVAVGYWLGGHLAELYAEFFRFPFLEFRLQLP
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
VVAIAAGVTAASALLGTWMAVRRAARLPPAEAMRPEPPPTYRPTVVERLGLQRWFSQPTR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MILRGIERRPLRAVLATLGIALAVAVLMIGPYQRNALNTMIDVQFNLVQRDDVTVSFYEP
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEEECCCEEEEEECC
TSRKALHELAGLPGVDRAEPFRQVAAEVAFGHRRHRMAVLGLEPGADLRRLLDTDLRTVP
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCCCC
LPEEGVVLTDYLADQLQVGPGDTLEIRVLEGRRQTLEVPVSGVIAEYLGVSVYMDLDALN
CCCCCEEEHHHHHHHHCCCCCCEEEEEEECCCCCEEECCHHHHHHHHHCCEEEECHHHHH
RLLGDGDAISGAWLGLAGPERGALLRELDRRPRVAGATEADAAMRNFEENVAGTMMVTAA
HHHCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MTTLLAGAIAFGVVYNNARIALAERSRELASLRVLGFTRREIAYLLLGEQALLIAAALPV
HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH
GFVIGHYLYAIIVQAAESELYRVPMIPSPAGMALATLVILAVAGLSAWVVRRRLDRLDMV
HHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALKSRE
HHHHCCC
>Mature Secondary Structure 
TALTRKLLRELGLMRGQVIAIAVVIAGGVATLMMFLTALFALTDTRDAFYQEYRFADLF
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AAAERAPRGLVEEIGGIDGVQRVEDRVVAAANLDVPGYDNPVTGRILSLPEGRQPDMNRL
HHHHHCCHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCCCEEEECCCCCCCCCHHH
HLRHGRLPEPGREQEAVVSDAFAEAHGLRPGDGLAAVVRGRYQRLEVVGVAVSPEFIYQI
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEEEEEECHHEEEEE
RPGEILPDYERYGILWMNRRALAAAYDMDGAFNDLLLTLQHGARPGDVIDAVDRLLEPWG
CCCCCCCCHHHCCEEEECCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
GRGAYGRADQLSHALLEDELTQLANLAYVLPAIFLGVAAFLLNVVVGRLIATQREIIGTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAFGYSRLAIATHYMRLVLLIVGLGVAVGVAVGYWLGGHLAELYAEFFRFPFLEFRLQLP
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
VVAIAAGVTAASALLGTWMAVRRAARLPPAEAMRPEPPPTYRPTVVERLGLQRWFSQPTR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MILRGIERRPLRAVLATLGIALAVAVLMIGPYQRNALNTMIDVQFNLVQRDDVTVSFYEP
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEEECCCEEEEEECC
TSRKALHELAGLPGVDRAEPFRQVAAEVAFGHRRHRMAVLGLEPGADLRRLLDTDLRTVP
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCCCC
LPEEGVVLTDYLADQLQVGPGDTLEIRVLEGRRQTLEVPVSGVIAEYLGVSVYMDLDALN
CCCCCEEEHHHHHHHHCCCCCCEEEEEEECCCCCEEECCHHHHHHHHHCCEEEECHHHHH
RLLGDGDAISGAWLGLAGPERGALLRELDRRPRVAGATEADAAMRNFEENVAGTMMVTAA
HHHCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MTTLLAGAIAFGVVYNNARIALAERSRELASLRVLGFTRREIAYLLLGEQALLIAAALPV
HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH
GFVIGHYLYAIIVQAAESELYRVPMIPSPAGMALATLVILAVAGLSAWVVRRRLDRLDMV
HHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALKSRE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA