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The map label for this gene is foxA [H]

Identifier: 121998662

GI number: 121998662

Start: 2063423

End: 2065471

Strand: Reverse

Name: foxA [H]

Synonym: Hhal_1883

Alternate gene names: 121998662

Gene position: 2065471-2063423 (Counterclockwise)

Preceding gene: 121998664

Following gene: 121998659

Centisome position: 77.11

GC content: 68.62

Gene sequence:

>2049_bases
GTGCTGTCGATCATGACTTCGGCTGCGATCGCGTGGTCGACAGGAGCTTTTGCGGATGCGTTGCCGCCGGTGACGGTGGT
GAGTGACCCGCCCTCAGAACCGTCTGTCCGGGCCGGTGACCGGGTGACCGCGCCTGGCGATCGCAAGGGACCTCGGCGGC
ATGGGCTTGAAGCGGGCGCGTTGGAGCGTTTAAACGCGGATCGCCTGGAGGAACTCGCCGGTGCCGTCCCCGGGGCGCAT
GCCGGACGCGAGGAAGGCGGGCTCGGTACGGCCTGGACCCTCCGCGGTTTCGAGGTCACCACGCCGCAGTGGAACGGGCT
GACCGATATCGATCGGCTCTTCGTCCGCGACCCCTACACCGTCGAGCAGGTCGAGGTGGTTCCCGGTCCCGACGCCATCC
TCCAGGGGGTGACGTCGCCTGGCGGCTCCATCCGTTACCAGGGCAAGCGGCCCGAGTACACGCCCGCCCACGAGGTGGGC
GTGGAGGCGGGGTACCCTGACCACCGCCGGGTGGTGGCCGATACCACTGGGCCCGTTGGGGACCACCTGGCCTACCGCCT
GACCCTTGCCGGCCAGGACGGCGAAAGCCGGCCCGCCGAGCAGCAGACCGAGCGGCTCCACGCCCTTGCCGGCCTGGCGT
GGCGCTACCACGCCGACGGCGAGCTCCGGCTCGAGCACGGGTTCCAGCGCAATCGGCAGCCCTACGACATGGGCACCGTC
TGGCTGGAGGATGGCCCGGTCTACGACACCCCGCTGCACAGCCCGGATCAGGAGAGTGACCGGCGCTACCAGCGCACGGC
GCTCTACTGGGACCACGCGCTGACCGAGGGTCTCGCGGTCTCCCTGCGCGCTGCGCACTCGGAGGTGGAGCGGGAGGAGG
CGATCGTGGGGTTCTACTCCTTTGGCCTATTGCCGGCGCCGGAGCCGGTGGCCGGGTACGCGGCCCGGATCGACGATCAG
TACACCCAGGACGATCTACGGCTCCAGCTCGAGTATGAACACGATACCGCCCGGACTCGGTGGCACTGGGTGGTCGGTGG
GGACATGCATCGGCAGGAGATCGACTTCCGGCGCGATCAGCTTCGCTATTGGGATGACGATGACGACTGGTGGCAACAGT
TCAGTGTCGATCCCAGAGATCCAGATTTTGCGGGCATCGAACTGTCCAACCTGGCCCTGACGCGGCAGGAGCGGCCCGAG
GAGACCGACCGCTACGGGGCCTATCTCGCCAACCGGCTGGAGGTGGGGGCGCGGTGGGCCTTCACCGCCGGTGTGCGTCA
TACCGAGTACGAGGTTCGTAAGGCGAATGAAGACGATCCGGAACTGGCGATTGCTGCCGAGGACCGGGCGCTCACCTGGC
AGGCCGGGCTGCAGCTGGACGTGACCCGTCGCGCGCAGTTGTTCGCCCATGCGGGCACCGGCATACGCCCCAACGAGGGC
ATCGACCGACACGGCGACTTCCTCCCCTCGCGCGAGAGCGCCGTCACTGAGCTGGGGTGGCGGTATGCGCCGGATCGCCG
GCAGCAGCTGGTGGTGGCCGCCTACCACCTGCGGGAGGAGAACCTGCCGCAGGAGGATGAGGCGTATTCGGAGGAGGACT
ACTTCCGGGCTGTCGGCGAGGTCGAGGTGGAGGGGGTGGAGGCCCGCTACGTCCTGGACACCGGGGCTTGGCGGATCGCT
CCCAACGCCACCCTCCAGCGCAGTCGCAACTACGACGAGGATGAGCCGGCGGAGCGGGGGAACCATTTTGAAGGGGTGCC
GCGCCACCTGGCTGGTCTGGAGGTGGATCACGATCTGGGCGCCTACACCCCCCTGGCGCTCCGTCTCTGGTACTGCGCCG
AGTATGTCGGCGGCTGGTACCTGGACGATGCCAACGACTACCGCACCGACGGTTACACCCTGCACAGCCTCGGGGCGATT
TACCAGTGGCCGGAGGGTACGCGGCTCGATCTGCGCGTGCGCAACGCCACCGATGAGCGGTACCTGGCGGCACCGCGGGT
GCAGGGGGAGCGCCGCGAGGTGCGCCTCGGGTTAAGCCGACGGTTCTGA

Upstream 100 bases:

>100_bases
ACCGCTGAACGTGGCGGGGCTCGATACCCTCGTCCGCGTTCTGTTGATTTGCCGACTCGAGTAGAGGCGCTAAGGGGGTA
GTGTGCTGGGATACCGCTCG

Downstream 100 bases:

>100_bases
TCCGCCGCGGGCCGCTAGGGCCCAGGCCAGGACCTCCGCCGGTGTGGACCGGCGGAGTGCGGGCGGAGGCGTGTAGCCGA
GCAGGGCCAGGGCATCGACC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MLSIMTSAAIAWSTGAFADALPPVTVVSDPPSEPSVRAGDRVTAPGDRKGPRRHGLEAGALERLNADRLEELAGAVPGAH
AGREEGGLGTAWTLRGFEVTTPQWNGLTDIDRLFVRDPYTVEQVEVVPGPDAILQGVTSPGGSIRYQGKRPEYTPAHEVG
VEAGYPDHRRVVADTTGPVGDHLAYRLTLAGQDGESRPAEQQTERLHALAGLAWRYHADGELRLEHGFQRNRQPYDMGTV
WLEDGPVYDTPLHSPDQESDRRYQRTALYWDHALTEGLAVSLRAAHSEVEREEAIVGFYSFGLLPAPEPVAGYAARIDDQ
YTQDDLRLQLEYEHDTARTRWHWVVGGDMHRQEIDFRRDQLRYWDDDDDWWQQFSVDPRDPDFAGIELSNLALTRQERPE
ETDRYGAYLANRLEVGARWAFTAGVRHTEYEVRKANEDDPELAIAAEDRALTWQAGLQLDVTRRAQLFAHAGTGIRPNEG
IDRHGDFLPSRESAVTELGWRYAPDRRQQLVVAAYHLREENLPQEDEAYSEEDYFRAVGEVEVEGVEARYVLDTGAWRIA
PNATLQRSRNYDEDEPAERGNHFEGVPRHLAGLEVDHDLGAYTPLALRLWYCAEYVGGWYLDDANDYRTDGYTLHSLGAI
YQWPEGTRLDLRVRNATDERYLAAPRVQGERREVRLGLSRRF

Sequences:

>Translated_682_residues
MLSIMTSAAIAWSTGAFADALPPVTVVSDPPSEPSVRAGDRVTAPGDRKGPRRHGLEAGALERLNADRLEELAGAVPGAH
AGREEGGLGTAWTLRGFEVTTPQWNGLTDIDRLFVRDPYTVEQVEVVPGPDAILQGVTSPGGSIRYQGKRPEYTPAHEVG
VEAGYPDHRRVVADTTGPVGDHLAYRLTLAGQDGESRPAEQQTERLHALAGLAWRYHADGELRLEHGFQRNRQPYDMGTV
WLEDGPVYDTPLHSPDQESDRRYQRTALYWDHALTEGLAVSLRAAHSEVEREEAIVGFYSFGLLPAPEPVAGYAARIDDQ
YTQDDLRLQLEYEHDTARTRWHWVVGGDMHRQEIDFRRDQLRYWDDDDDWWQQFSVDPRDPDFAGIELSNLALTRQERPE
ETDRYGAYLANRLEVGARWAFTAGVRHTEYEVRKANEDDPELAIAAEDRALTWQAGLQLDVTRRAQLFAHAGTGIRPNEG
IDRHGDFLPSRESAVTELGWRYAPDRRQQLVVAAYHLREENLPQEDEAYSEEDYFRAVGEVEVEGVEARYVLDTGAWRIA
PNATLQRSRNYDEDEPAERGNHFEGVPRHLAGLEVDHDLGAYTPLALRLWYCAEYVGGWYLDDANDYRTDGYTLHSLGAI
YQWPEGTRLDLRVRNATDERYLAAPRVQGERREVRLGLSRRF
>Mature_682_residues
MLSIMTSAAIAWSTGAFADALPPVTVVSDPPSEPSVRAGDRVTAPGDRKGPRRHGLEAGALERLNADRLEELAGAVPGAH
AGREEGGLGTAWTLRGFEVTTPQWNGLTDIDRLFVRDPYTVEQVEVVPGPDAILQGVTSPGGSIRYQGKRPEYTPAHEVG
VEAGYPDHRRVVADTTGPVGDHLAYRLTLAGQDGESRPAEQQTERLHALAGLAWRYHADGELRLEHGFQRNRQPYDMGTV
WLEDGPVYDTPLHSPDQESDRRYQRTALYWDHALTEGLAVSLRAAHSEVEREEAIVGFYSFGLLPAPEPVAGYAARIDDQ
YTQDDLRLQLEYEHDTARTRWHWVVGGDMHRQEIDFRRDQLRYWDDDDDWWQQFSVDPRDPDFAGIELSNLALTRQERPE
ETDRYGAYLANRLEVGARWAFTAGVRHTEYEVRKANEDDPELAIAAEDRALTWQAGLQLDVTRRAQLFAHAGTGIRPNEG
IDRHGDFLPSRESAVTELGWRYAPDRRQQLVVAAYHLREENLPQEDEAYSEEDYFRAVGEVEVEGVEARYVLDTGAWRIA
PNATLQRSRNYDEDEPAERGNHFEGVPRHLAGLEVDHDLGAYTPLALRLWYCAEYVGGWYLDDANDYRTDGYTLHSLGAI
YQWPEGTRLDLRVRNATDERYLAAPRVQGERREVRLGLSRRF

Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=603, Percent_Identity=22.2222222222222, Blast_Score=83, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 77114; Mature: 77114

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIMTSAAIAWSTGAFADALPPVTVVSDPPSEPSVRAGDRVTAPGDRKGPRRHGLEAGA
CCCCHHHHHHEECCCCHHHCCCCEEEECCCCCCCCCCCCCEECCCCCCCCCHHHCCCCHH
LERLNADRLEELAGAVPGAHAGREEGGLGTAWTLRGFEVTTPQWNGLTDIDRLFVRDPYT
HHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECEEECCCCCCCCCHHHHHHHCCCCC
VEQVEVVPGPDAILQGVTSPGGSIRYQGKRPEYTPAHEVGVEAGYPDHRRVVADTTGPVG
EEEEEECCCCHHHHHCCCCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCC
DHLAYRLTLAGQDGESRPAEQQTERLHALAGLAWRYHADGELRLEHGFQRNRQPYDMGTV
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCEEEEECCCEEEECCCHHCCCCCCCCCEE
WLEDGPVYDTPLHSPDQESDRRYQRTALYWDHALTEGLAVSLRAAHSEVEREEAIVGFYS
EECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEHHH
FGLLPAPEPVAGYAARIDDQYTQDDLRLQLEYEHDTARTRWHWVVGGDMHRQEIDFRRDQ
HCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHH
LRYWDDDDDWWQQFSVDPRDPDFAGIELSNLALTRQERPEETDRYGAYLANRLEVGARWA
CCCCCCCHHHHHHCCCCCCCCCCCCEEEHHEEECCCCCCCHHHHHHHHHHHHHHHCCEEE
FTAGVRHTEYEVRKANEDDPELAIAAEDRALTWQAGLQLDVTRRAQLFAHAGTGIRPNEG
EECCCCCCEEHHCCCCCCCCCEEEEECCCEEEEECCCEEEEHHHHHHHHHCCCCCCCCCC
IDRHGDFLPSRESAVTELGWRYAPDRRQQLVVAAYHLREENLPQEDEAYSEEDYFRAVGE
CCCCCCCCCCHHHHHHHHCCCCCCCHHHEEEEHEEHHHHCCCCCCHHCCCHHHHHHHCCC
VEVEGVEARYVLDTGAWRIAPNATLQRSRNYDEDEPAERGNHFEGVPRHLAGLEVDHDLG
EEEECEEEEEEEECCCEEECCCCHHHHCCCCCCCCHHHCCCCCCCCHHHHHCCEECCCCC
AYTPLALRLWYCAEYVGGWYLDDANDYRTDGYTLHSLGAIYQWPEGTRLDLRVRNATDER
CCCHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCEEECCCCCEEEEEEECCCCCC
YLAAPRVQGERREVRLGLSRRF
EEECCCCCCCHHHEEECCCCCC
>Mature Secondary Structure
MLSIMTSAAIAWSTGAFADALPPVTVVSDPPSEPSVRAGDRVTAPGDRKGPRRHGLEAGA
CCCCHHHHHHEECCCCHHHCCCCEEEECCCCCCCCCCCCCEECCCCCCCCCHHHCCCCHH
LERLNADRLEELAGAVPGAHAGREEGGLGTAWTLRGFEVTTPQWNGLTDIDRLFVRDPYT
HHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECEEECCCCCCCCCHHHHHHHCCCCC
VEQVEVVPGPDAILQGVTSPGGSIRYQGKRPEYTPAHEVGVEAGYPDHRRVVADTTGPVG
EEEEEECCCCHHHHHCCCCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCC
DHLAYRLTLAGQDGESRPAEQQTERLHALAGLAWRYHADGELRLEHGFQRNRQPYDMGTV
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCEEEEECCCEEEECCCHHCCCCCCCCCEE
WLEDGPVYDTPLHSPDQESDRRYQRTALYWDHALTEGLAVSLRAAHSEVEREEAIVGFYS
EECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEHHH
FGLLPAPEPVAGYAARIDDQYTQDDLRLQLEYEHDTARTRWHWVVGGDMHRQEIDFRRDQ
HCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHH
LRYWDDDDDWWQQFSVDPRDPDFAGIELSNLALTRQERPEETDRYGAYLANRLEVGARWA
CCCCCCCHHHHHHCCCCCCCCCCCCEEEHHEEECCCCCCCHHHHHHHHHHHHHHHCCEEE
FTAGVRHTEYEVRKANEDDPELAIAAEDRALTWQAGLQLDVTRRAQLFAHAGTGIRPNEG
EECCCCCCEEHHCCCCCCCCCEEEEECCCEEEEECCCEEEEHHHHHHHHHCCCCCCCCCC
IDRHGDFLPSRESAVTELGWRYAPDRRQQLVVAAYHLREENLPQEDEAYSEEDYFRAVGE
CCCCCCCCCCHHHHHHHHCCCCCCCHHHEEEEHEEHHHHCCCCCCHHCCCHHHHHHHCCC
VEVEGVEARYVLDTGAWRIAPNATLQRSRNYDEDEPAERGNHFEGVPRHLAGLEVDHDLG
EEEECEEEEEEEECCCEEECCCCHHHHCCCCCCCCHHHCCCCCCCCHHHHHCCEECCCCC
AYTPLALRLWYCAEYVGGWYLDDANDYRTDGYTLHSLGAIYQWPEGTRLDLRVRNATDER
CCCHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCEEECCCCCEEEEEEECCCCCC
YLAAPRVQGERREVRLGLSRRF
EEECCCCCCCHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609; 10103258; 7642488 [H]