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The map label for this gene is 121998654

Identifier: 121998654

GI number: 121998654

Start: 2049334

End: 2050854

Strand: Reverse

Name: 121998654

Synonym: Hhal_1875

Alternate gene names: NA

Gene position: 2050854-2049334 (Counterclockwise)

Preceding gene: 121998655

Following gene: 121998653

Centisome position: 76.57

GC content: 69.1

Gene sequence:

>1521_bases
ATGCGACGGTGTAAGCCCGATTGGCGCGGGCCCCTGGGGAGCCTGCTCGTTGGCGGTGTTCTAGTGGTGCTGGCCGGCCG
CGCGGTGGCCGAGGCCGATGACACCTGGGGGCTGAGTCTCGAGGAAGCGGTCTACAGCGCCGTCGAGCACAATCCGGCCC
TCCAGGCCGAGCGCCTGGGGCCGGTGGTCGCCGGTACCTTCGAGCAGATCGAGCTGGGGGCGTTCGATCCGGAGGTCTTT
GTCGAGGGCGACTACCGCCGCCGGCAACTGGAGCAGATCGGCCTTGAGACGGGGCAGGCGCGGGATACCGACCGTACCGA
TGTGGGCTTATCGGTCGGTATTGGTCAGCGGCTGCCCATCGGCGCTGACTGGCGCCTGTCTGCGGTCCAGGATTTTGACG
AGGATCGCGCCAGTGGTCAGGAGCTGCACACCAGTGGTCTGCAGCTGCGGCTCAGCCAGCAGCTTCTCCAGGGCCGGGGG
CGCGAGGTCAACCTGGTCAGCCTGCGCCAGGCGGAGCTGGAGACCCTGCGCTCCGAGCACGAGCTGCAGGGCTTTGCCCA
GCAGCTGGTGGCGGACGTCGAGGCGGCGTACTGGGATTTCGCCCTTGCCGATCGCGAGATCGCCATCTTCGAGGAGTCCC
TGAATCTGGCCGAGGAAGAGGTGCAGCGGGCCGAGGAGCGGGTCCGTTTGGGGGATCTGGCCGAGACCGAGTTGGCGCCG
CTGGAGTCCGAGGCCGCGCTACGCCGTCAGGAGCTGATCGATGCCCGCAGCCGGCGCGAGGCGGCGCGGCTGGAGTTGCT
GCGGCTGATCGGCAGCGAGGATCAGCTCCGGGAGGATCGCGAGATCGAGCCGCTCACCGACCCGGAGCGCTTGGTGGTCG
AGCCGGATCCGGTGGCCGAGCATCTGGCCCTGGCCCTGGAGCGGCGCCCGGAACTCAATCAGGCCCGGCTGGACCTGCGC
AGCGAGAACCTGCAGGTTACCCAGACGCGGAATGGCTTGTTGCCCGAGCTGGAGTTGTTTATCCAGCTGGGTAGCAGTGG
TTACGCCGACTCCTTCAGCGGGGCGCCCCGAGATCTGGACGGCTCCAGTTACGACGCCCAGGTGGGCATCTCCCTGGGCC
GCTCACTCACCAACCGGGCCCCCGAGGCCGAGCACCGCCAGGCGCTGACGCTTCGCAACCAGGCCAATCTGAGTCTGAGC
AACATGGCCCGGCTGGTCAGGCACGATGTCCGCACAGCGCACCTGGAGTTGCAGCGGGCGGCTGCACAGATCGAGGCCAG
CGGTGCCACCCGCCGCGCCCGGGAGGAGCAGGTGCGCGCGGCGGACGAGCGCTTCCGGGCCGGGGATGCCACGGCCTTCG
CCGTGGTCCAGGCCCAGCGTGATCTGCTCGAGAGCCGCATCAACGAGGCAGCGGCGCAGGCGGAGTACCGCACGGCGTTG
GTCGAGCTCTACCGACTGGATGGCACGTTGCTCGAGCGTCGCGGCATCCAGTCGGCGACCGACGATGTCGTCCCGCGCTG
A

Upstream 100 bases:

>100_bases
GCCCGGGCCGTGCTCGGCGGGCTGATCACCGGGACGCTGATCACGCTGGTGGTCATCCCGGTGGTCTTTACCCTGTTCCA
CACAGCGAAGGGCAGACGGC

Downstream 100 bases:

>100_bases
CATCGCAAACAAGGAGCCGTCGCCTATGACCAATCCGCTGGACTACCCGCGCTTCCCCTTCCGGGCCGGGGCGAGCGCGA
CCACCGCGGCACCGCTGCCG

Product: outer membrane efflux protein

Products: NA

Alternate protein names: RND Family Efflux Pump Outer Membrane Protein

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MRRCKPDWRGPLGSLLVGGVLVVLAGRAVAEADDTWGLSLEEAVYSAVEHNPALQAERLGPVVAGTFEQIELGAFDPEVF
VEGDYRRRQLEQIGLETGQARDTDRTDVGLSVGIGQRLPIGADWRLSAVQDFDEDRASGQELHTSGLQLRLSQQLLQGRG
REVNLVSLRQAELETLRSEHELQGFAQQLVADVEAAYWDFALADREIAIFEESLNLAEEEVQRAEERVRLGDLAETELAP
LESEAALRRQELIDARSRREAARLELLRLIGSEDQLREDREIEPLTDPERLVVEPDPVAEHLALALERRPELNQARLDLR
SENLQVTQTRNGLLPELELFIQLGSSGYADSFSGAPRDLDGSSYDAQVGISLGRSLTNRAPEAEHRQALTLRNQANLSLS
NMARLVRHDVRTAHLELQRAAAQIEASGATRRAREEQVRAADERFRAGDATAFAVVQAQRDLLESRINEAAAQAEYRTAL
VELYRLDGTLLERRGIQSATDDVVPR

Sequences:

>Translated_506_residues
MRRCKPDWRGPLGSLLVGGVLVVLAGRAVAEADDTWGLSLEEAVYSAVEHNPALQAERLGPVVAGTFEQIELGAFDPEVF
VEGDYRRRQLEQIGLETGQARDTDRTDVGLSVGIGQRLPIGADWRLSAVQDFDEDRASGQELHTSGLQLRLSQQLLQGRG
REVNLVSLRQAELETLRSEHELQGFAQQLVADVEAAYWDFALADREIAIFEESLNLAEEEVQRAEERVRLGDLAETELAP
LESEAALRRQELIDARSRREAARLELLRLIGSEDQLREDREIEPLTDPERLVVEPDPVAEHLALALERRPELNQARLDLR
SENLQVTQTRNGLLPELELFIQLGSSGYADSFSGAPRDLDGSSYDAQVGISLGRSLTNRAPEAEHRQALTLRNQANLSLS
NMARLVRHDVRTAHLELQRAAAQIEASGATRRAREEQVRAADERFRAGDATAFAVVQAQRDLLESRINEAAAQAEYRTAL
VELYRLDGTLLERRGIQSATDDVVPR
>Mature_506_residues
MRRCKPDWRGPLGSLLVGGVLVVLAGRAVAEADDTWGLSLEEAVYSAVEHNPALQAERLGPVVAGTFEQIELGAFDPEVF
VEGDYRRRQLEQIGLETGQARDTDRTDVGLSVGIGQRLPIGADWRLSAVQDFDEDRASGQELHTSGLQLRLSQQLLQGRG
REVNLVSLRQAELETLRSEHELQGFAQQLVADVEAAYWDFALADREIAIFEESLNLAEEEVQRAEERVRLGDLAETELAP
LESEAALRRQELIDARSRREAARLELLRLIGSEDQLREDREIEPLTDPERLVVEPDPVAEHLALALERRPELNQARLDLR
SENLQVTQTRNGLLPELELFIQLGSSGYADSFSGAPRDLDGSSYDAQVGISLGRSLTNRAPEAEHRQALTLRNQANLSLS
NMARLVRHDVRTAHLELQRAAAQIEASGATRRAREEQVRAADERFRAGDATAFAVVQAQRDLLESRINEAAAQAEYRTAL
VELYRLDGTLLERRGIQSATDDVVPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56297; Mature: 56297

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRCKPDWRGPLGSLLVGGVLVVLAGRAVAEADDTWGLSLEEAVYSAVEHNPALQAERLG
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHCC
PVVAGTFEQIELGAFDPEVFVEGDYRRRQLEQIGLETGQARDTDRTDVGLSVGIGQRLPI
CHHCCCHHHEECCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC
GADWRLSAVQDFDEDRASGQELHTSGLQLRLSQQLLQGRGREVNLVSLRQAELETLRSEH
CCCCCHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH
ELQGFAQQLVADVEAAYWDFALADREIAIFEESLNLAEEEVQRAEERVRLGDLAETELAP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
LESEAALRRQELIDARSRREAARLELLRLIGSEDQLREDREIEPLTDPERLVVEPDPVAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEECCCHHHH
HLALALERRPELNQARLDLRSENLQVTQTRNGLLPELELFIQLGSSGYADSFSGAPRDLD
HHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
GSSYDAQVGISLGRSLTNRAPEAEHRQALTLRNQANLSLSNMARLVRHDVRTAHLELQRA
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAQIEASGATRRAREEQVRAADERFRAGDATAFAVVQAQRDLLESRINEAAAQAEYRTAL
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VELYRLDGTLLERRGIQSATDDVVPR
HHHHHHCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRRCKPDWRGPLGSLLVGGVLVVLAGRAVAEADDTWGLSLEEAVYSAVEHNPALQAERLG
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHCC
PVVAGTFEQIELGAFDPEVFVEGDYRRRQLEQIGLETGQARDTDRTDVGLSVGIGQRLPI
CHHCCCHHHEECCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC
GADWRLSAVQDFDEDRASGQELHTSGLQLRLSQQLLQGRGREVNLVSLRQAELETLRSEH
CCCCCHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH
ELQGFAQQLVADVEAAYWDFALADREIAIFEESLNLAEEEVQRAEERVRLGDLAETELAP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
LESEAALRRQELIDARSRREAARLELLRLIGSEDQLREDREIEPLTDPERLVVEPDPVAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEECCCHHHH
HLALALERRPELNQARLDLRSENLQVTQTRNGLLPELELFIQLGSSGYADSFSGAPRDLD
HHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
GSSYDAQVGISLGRSLTNRAPEAEHRQALTLRNQANLSLSNMARLVRHDVRTAHLELQRA
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAQIEASGATRRAREEQVRAADERFRAGDATAFAVVQAQRDLLESRINEAAAQAEYRTAL
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VELYRLDGTLLERRGIQSATDDVVPR
HHHHHHCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA