| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is bchB
Identifier: 121998415
GI number: 121998415
Start: 1786208
End: 1787788
Strand: Reverse
Name: bchB
Synonym: Hhal_1636
Alternate gene names: 121998415
Gene position: 1787788-1786208 (Counterclockwise)
Preceding gene: 121998416
Following gene: 121998414
Centisome position: 66.75
GC content: 67.74
Gene sequence:
>1581_bases ATGCAGCTGACGCTCTGGACTTACGAAGGCCCACCCCACGTCGGCGCGATGCGCATCGCCGCGTCGATGAAGGGAGTGCA CTGCGTCCTCCACGCGCCCCAGGGCGATACCTACGCCGACCTGCTGTTCACGATGATCGAGCGGCGCCCGGGGCGGCCGC CGGTCAGCTATAGCACGTTCAACGCCCGGCATCTCGGGCGGGACACCGCCGAGCTGGTGCGTGAGACGGTCACCGCGGCC TACGAGCGCTACCAGCCCGAGGCCCTGCTGGTCGGGGACTCGTGCACGGCGGAGCTGCTCCAGGATCAGCCCGGCGACCT GGCCCAGGGCATGGATCTGCCCGTACCGGTCATCGGGCTTGAACTCTCGGCGTACTCCCGCAAGGAGGGCTACGGCGCCA GCGAGGCGTTCTATCAACTGGTCCGCGGCCTCCTTGAGACCAATGGTGCGAGTGCGGGCGCGCAGCCGGACGCAAGCCGC GCCCCCCGTGCCAATCTGCTCGGTCCGACATCGCTGGGCTTTCGCTGCCGGGACGATGTGCAGGAGGTCACCCGGCTGCT GGAGTCCGTCGGGGTCGAGGTCAACGTGGTCGCACCGCTCGGGGCCAGCCCCGAGGATCTGCGTCGCATCCCCGAAGCCG ATTTCAACGTCTGTCTCTATCCCGAGGTGGCGCGCTCCACCTGCGAGTGGCTGCAGCGCCGCTTCGGCCAGCCGACCGTT ACCACGGTGCCGCTGGGCCTCGGCGCGACCCGCGATTTCCTCGCCGAGGTCGGTCGGGTGACCGGACTGGACGTCAGCCA GGGGGTGGCCGATGCCAACGCCCGCATGGCTTGGTACAGCCGATCCGTCGACTCCAACTACTTGACCGGAAAACGGGTCT TCATCTTTGGCGACGGCACCCACGCGGTGGCTGCCGCGCGCATCGCCAGTGAGGAACTGGGTTTCGAGGTGGTCGGGTTG GGCACCTACGCCCGTGAAGAGGCGCGGGAGGTTCGCCGGGCCGCCAAGGCCTACGGGGTCGAGCCGTTGATCACCGATGA TTATCTGGAGGTCGAGCGTGCCGCCACCGAGGCCAGCCCCGAGCTGGTCCTCGGTACCCAGATGGAGCGGCACATCGCCA AGCGCCTGGGGGTGCCGTGCGCGGTCATCTCGGCTCCGGTCCATGTTCAGGACTTCCCGGCCCGCTATGCGCCGAATATG GGCCTGGAAGGGGCCAACGTCATCTTCGATACCTGGGTCCACCCGCTGATGATGGGCCTGGAAGAGCATCTGCTCGGGAT GTTCAAGGAAGACTTCGAGTTCACGGCTGACGCCCCCTCTCATCTGGAGGCCGGCGCGGCGCCTTCTCCCGGGGGGGCGG CTCGAGAAGAGGGGCAGGCCGAGACGGCGGTCGCCGTCGCCGAGTCGGAGGAAGGCGCTGAGGTGCGCTGGACGCCGGAG GCCGAAGCCGAACTGAAAAAGATCCCGTTCTTCGTGCGGGGCAAGGCCCGGCGCAATACCGAGCGCTTCGCCGCCGACCG AGGCATTGCGACAATAACAGTGGAGACGATCTACGATGCCAAAGCCCACTTCAGTCGCTGA
Upstream 100 bases:
>100_bases GCTGGTCTTCTCGCCCATCCAGGGGTTCGAGCAGGCCGGCGACCTTGCCGAGCTCTTTGCCCGGCCACTGGTCCGCCACG AGACGCTGAAGGTGTAGAGG
Downstream 100 bases:
>100_bases CCCGACGCCGGTGCGCGTCGCCATCATCACGCTGGACAGCCACATGGCAGGCGCCGTGGAGCGCGCGCGGCCGGCTCTGC AACGCGATATCCCCGGCCTG
Product: light-independent protochlorophyllide reductase subunit B
Products: NA
Alternate protein names: DPOR subunit B; LI-POR subunit B
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MQLTLWTYEGPPHVGAMRIAASMKGVHCVLHAPQGDTYADLLFTMIERRPGRPPVSYSTFNARHLGRDTAELVRETVTAA YERYQPEALLVGDSCTAELLQDQPGDLAQGMDLPVPVIGLELSAYSRKEGYGASEAFYQLVRGLLETNGASAGAQPDASR APRANLLGPTSLGFRCRDDVQEVTRLLESVGVEVNVVAPLGASPEDLRRIPEADFNVCLYPEVARSTCEWLQRRFGQPTV TTVPLGLGATRDFLAEVGRVTGLDVSQGVADANARMAWYSRSVDSNYLTGKRVFIFGDGTHAVAAARIASEELGFEVVGL GTYAREEAREVRRAAKAYGVEPLITDDYLEVERAATEASPELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYAPNM GLEGANVIFDTWVHPLMMGLEEHLLGMFKEDFEFTADAPSHLEAGAAPSPGGAAREEGQAETAVAVAESEEGAEVRWTPE AEAELKKIPFFVRGKARRNTERFAADRGIATITVETIYDAKAHFSR
Sequences:
>Translated_526_residues MQLTLWTYEGPPHVGAMRIAASMKGVHCVLHAPQGDTYADLLFTMIERRPGRPPVSYSTFNARHLGRDTAELVRETVTAA YERYQPEALLVGDSCTAELLQDQPGDLAQGMDLPVPVIGLELSAYSRKEGYGASEAFYQLVRGLLETNGASAGAQPDASR APRANLLGPTSLGFRCRDDVQEVTRLLESVGVEVNVVAPLGASPEDLRRIPEADFNVCLYPEVARSTCEWLQRRFGQPTV TTVPLGLGATRDFLAEVGRVTGLDVSQGVADANARMAWYSRSVDSNYLTGKRVFIFGDGTHAVAAARIASEELGFEVVGL GTYAREEAREVRRAAKAYGVEPLITDDYLEVERAATEASPELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYAPNM GLEGANVIFDTWVHPLMMGLEEHLLGMFKEDFEFTADAPSHLEAGAAPSPGGAAREEGQAETAVAVAESEEGAEVRWTPE AEAELKKIPFFVRGKARRNTERFAADRGIATITVETIYDAKAHFSR >Mature_526_residues MQLTLWTYEGPPHVGAMRIAASMKGVHCVLHAPQGDTYADLLFTMIERRPGRPPVSYSTFNARHLGRDTAELVRETVTAA YERYQPEALLVGDSCTAELLQDQPGDLAQGMDLPVPVIGLELSAYSRKEGYGASEAFYQLVRGLLETNGASAGAQPDASR APRANLLGPTSLGFRCRDDVQEVTRLLESVGVEVNVVAPLGASPEDLRRIPEADFNVCLYPEVARSTCEWLQRRFGQPTV TTVPLGLGATRDFLAEVGRVTGLDVSQGVADANARMAWYSRSVDSNYLTGKRVFIFGDGTHAVAAARIASEELGFEVVGL GTYAREEAREVRRAAKAYGVEPLITDDYLEVERAATEASPELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYAPNM GLEGANVIFDTWVHPLMMGLEEHLLGMFKEDFEFTADAPSHLEAGAAPSPGGAAREEGQAETAVAVAESEEGAEVRWTPE AEAELKKIPFFVRGKARRNTERFAADRGIATITVETIYDAKAHFSR
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ChlB/BchB/BchZ family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): BCHB_HALHL (A1WXI8)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003202.1 - STRING: A1WXI8 - GeneID: 4709630 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_1636 - eggNOG: COG2710 - HOGENOM: HBG284444 - OMA: TQMERHS - ProtClustDB: PRK02910 - BioCyc: HHAL349124:HHAL_1636-MONOMER - HAMAP: MF_00353 - InterPro: IPR000510 - InterPro: IPR013580 - InterPro: IPR005969 - InterPro: IPR016209 - PIRSF: PIRSF000163 - TIGRFAMs: TIGR01278
Pfam domain/function: PF00148 Oxidored_nitro; PF08369 PCP_red
EC number: 1.18.-.-
Molecular weight: Translated: 57165; Mature: 57165
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTLWTYEGPPHVGAMRIAASMKGVHCVLHAPQGDTYADLLFTMIERRPGRPPVSYSTF CEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCC NARHLGRDTAELVRETVTAAYERYQPEALLVGDSCTAELLQDQPGDLAQGMDLPVPVIGL CHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCHHCCCCCCCCEEEE ELSAYSRKEGYGASEAFYQLVRGLLETNGASAGAQPDASRAPRANLLGPTSLGFRCRDDV EECHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH QEVTRLLESVGVEVNVVAPLGASPEDLRRIPEADFNVCLYPEVARSTCEWLQRRFGQPTV HHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCCE TTVPLGLGATRDFLAEVGRVTGLDVSQGVADANARMAWYSRSVDSNYLTGKRVFIFGDGT EEEECCCCCHHHHHHHHHCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCC HAVAAARIASEELGFEVVGLGTYAREEAREVRRAAKAYGVEPLITDDYLEVERAATEASP HHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC ELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYAPNMGLEGANVIFDTWVHPLMMGL CEEECCHHHHHHHHHHCCCEEECCCCCEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHH EEHLLGMFKEDFEFTADAPSHLEAGAAPSPGGAAREEGQAETAVAVAESEEGAEVRWTPE HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCEEEECCC AEAELKKIPFFVRGKARRNTERFAADRGIATITVETIYDAKAHFSR HHHHHHHCCEEEECCCCCCHHHHHHCCCEEEEEEEEHHCCHHHCCC >Mature Secondary Structure MQLTLWTYEGPPHVGAMRIAASMKGVHCVLHAPQGDTYADLLFTMIERRPGRPPVSYSTF CEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCC NARHLGRDTAELVRETVTAAYERYQPEALLVGDSCTAELLQDQPGDLAQGMDLPVPVIGL CHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCHHCCCCCCCCEEEE ELSAYSRKEGYGASEAFYQLVRGLLETNGASAGAQPDASRAPRANLLGPTSLGFRCRDDV EECHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH QEVTRLLESVGVEVNVVAPLGASPEDLRRIPEADFNVCLYPEVARSTCEWLQRRFGQPTV HHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCCE TTVPLGLGATRDFLAEVGRVTGLDVSQGVADANARMAWYSRSVDSNYLTGKRVFIFGDGT EEEECCCCCHHHHHHHHHCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCC HAVAAARIASEELGFEVVGLGTYAREEAREVRRAAKAYGVEPLITDDYLEVERAATEASP HHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC ELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYAPNMGLEGANVIFDTWVHPLMMGL CEEECCHHHHHHHHHHCCCEEECCCCCEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHH EEHLLGMFKEDFEFTADAPSHLEAGAAPSPGGAAREEGQAETAVAVAESEEGAEVRWTPE HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCEEEECCC AEAELKKIPFFVRGKARRNTERFAADRGIATITVETIYDAKAHFSR HHHHHHHCCEEEECCCCCCHHHHHHCCCEEEEEEEEHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA