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The map label for this gene is pucC [H]

Identifier: 121998411

GI number: 121998411

Start: 1779454

End: 1780881

Strand: Reverse

Name: pucC [H]

Synonym: Hhal_1632

Alternate gene names: 121998411

Gene position: 1780881-1779454 (Counterclockwise)

Preceding gene: 121998412

Following gene: 121998410

Centisome position: 66.49

GC content: 66.11

Gene sequence:

>1428_bases
ATGACGGATTCCGCGTCTCTGCTCAAGGCGCGTCTGCGCCGTTTAGCTGTCCCGTTTGCCGAGGTCGGCACCCGGGAACT
CCCCATGACGCAAATCCTGCGTCTGTCCCTGTTCCAGGTCACCGTGGGCATGATTTACGTCATGTTCACGGGGACCCTCA
ACCGTGTGATGATCCACGAGCTGGGTATCGCAGCGTCCCTGCTTGGCGCGGTGATCGCCTTGCCGATCCTGTTCGCGCCC
CTGCGCCTGCTCATCGGGCACCGTTCGGACCATCGCCGCTCGGCCCTGGGGTGGCGTCGGGTACCGTATCTGTGGATTGG
CACGCTATTGATGTTCGGCGGCCTGGCGGTGATGCCCTTCGGCCTGTTGGTACAGTCCGAGTATGGCGCTGATGCGCCGT
TCCTCGCCTCCCTGGGGGCGGCGCTGGCCTTCTTCCTGTCCGGCCTGGGTGTGCACGTCACCCAGACGACCGGTCTGGCA
CTGACGAACGATCTGGCCCCCGAGGGGAAGCTGCCCCAGGTGGTCGGCGTGATGTACGTCATGCTGCTGGTCGGCATGGT
GATCTCCACCGGTGTGTTCTATGTGCTGCTCGCCGATTTCAGCCACGAGCGCTTGGTGCAGGTGCTCCAGGGCGCGGCGC
TGGTGATCTGGGCGCTGAATGTGTTTGCGCTGTGGCGGCAGGAGCCGCGGGACCCGGAACGCAGCCGCGTCGATCGACCG
CGTCCACCGCTAAGCGAGTCGTGGCAAAGTTTCATGCAGAGGGGTCCGGTGGTTCGCCTGCTGGTGGTAACCGGCATCGG
TGCGGCCGGCTTCGGGATGCAGGACATCATCATCGAGCCCTACGGGGCTGCGGTCCTGGGTCTGGAGGTCGCCGGCACCA
CGCTGCTGACCGGGTTGTGGGCGATCGGCATGCTCATCGGCTTCTGGTTCGCCAAGATGGCCCTTGAGCGCGGACTCAAC
GCCTACGGCGCGGCGACCATCGGTGCCCTGGTTGGCGTGCTGGCGTTTTCGCTGGTGATCGTCTCGGCACCCCTCGACTC
GCCGACGATCTTCCGGGTCGGGCAGGTCGGGATCGGGGTCGGAGGGGCCCTGTTCTACGTCGGGACGCTCGCCGCAACGA
TGTCGATGGCGACGCGCGAGCAGAGCGGCATTGCCATCGGCGCGTGGGGTGCAGTGCAGGCGACCGTGCTCGGTGCCGCA
CTGGCCATCGGGGCCGGGATCTCCGATCTGGTTCCGGCTCTGGCCGAGGCCGGCAGATTGCCGGAGTTGTTCCTGCACCC
GGCGGCAGGGTACAGCGTGGTCTATTCGGCGGAGATCGTGCTGCTGCTCGCCATGGTCGTCGCGGCGTGGCCGCTGGCGC
GGTTTACAAGAGAGGGGGAGAGTAACGTATCGCCGTCGACAGCAACGTCCAACGAGTCGGGTTACTAG

Upstream 100 bases:

>100_bases
TCGGAGAGGATGCCACGCTCGGGAGCGGGTGGGAGATCGGCCGCACACGGAAGATCGCGCGGGGCTTCTACATTTCTCAG
GCACTAGAGCTGCAGCGACC

Downstream 100 bases:

>100_bases
CGACTACGGTCGCACCACGGGCCCTTGGCGCGCCAAGCGTGGCAGGGTTAGGCAAACGTCATCGTCGTCTCGTACAGGCC
AAGCCGTTGAATCGGTAAGG

Product: PUCC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MTDSASLLKARLRRLAVPFAEVGTRELPMTQILRLSLFQVTVGMIYVMFTGTLNRVMIHELGIAASLLGAVIALPILFAP
LRLLIGHRSDHRRSALGWRRVPYLWIGTLLMFGGLAVMPFGLLVQSEYGADAPFLASLGAALAFFLSGLGVHVTQTTGLA
LTNDLAPEGKLPQVVGVMYVMLLVGMVISTGVFYVLLADFSHERLVQVLQGAALVIWALNVFALWRQEPRDPERSRVDRP
RPPLSESWQSFMQRGPVVRLLVVTGIGAAGFGMQDIIIEPYGAAVLGLEVAGTTLLTGLWAIGMLIGFWFAKMALERGLN
AYGAATIGALVGVLAFSLVIVSAPLDSPTIFRVGQVGIGVGGALFYVGTLAATMSMATREQSGIAIGAWGAVQATVLGAA
LAIGAGISDLVPALAEAGRLPELFLHPAAGYSVVYSAEIVLLLAMVVAAWPLARFTREGESNVSPSTATSNESGY

Sequences:

>Translated_475_residues
MTDSASLLKARLRRLAVPFAEVGTRELPMTQILRLSLFQVTVGMIYVMFTGTLNRVMIHELGIAASLLGAVIALPILFAP
LRLLIGHRSDHRRSALGWRRVPYLWIGTLLMFGGLAVMPFGLLVQSEYGADAPFLASLGAALAFFLSGLGVHVTQTTGLA
LTNDLAPEGKLPQVVGVMYVMLLVGMVISTGVFYVLLADFSHERLVQVLQGAALVIWALNVFALWRQEPRDPERSRVDRP
RPPLSESWQSFMQRGPVVRLLVVTGIGAAGFGMQDIIIEPYGAAVLGLEVAGTTLLTGLWAIGMLIGFWFAKMALERGLN
AYGAATIGALVGVLAFSLVIVSAPLDSPTIFRVGQVGIGVGGALFYVGTLAATMSMATREQSGIAIGAWGAVQATVLGAA
LAIGAGISDLVPALAEAGRLPELFLHPAAGYSVVYSAEIVLLLAMVVAAWPLARFTREGESNVSPSTATSNESGY
>Mature_474_residues
TDSASLLKARLRRLAVPFAEVGTRELPMTQILRLSLFQVTVGMIYVMFTGTLNRVMIHELGIAASLLGAVIALPILFAPL
RLLIGHRSDHRRSALGWRRVPYLWIGTLLMFGGLAVMPFGLLVQSEYGADAPFLASLGAALAFFLSGLGVHVTQTTGLAL
TNDLAPEGKLPQVVGVMYVMLLVGMVISTGVFYVLLADFSHERLVQVLQGAALVIWALNVFALWRQEPRDPERSRVDRPR
PPLSESWQSFMQRGPVVRLLVVTGIGAAGFGMQDIIIEPYGAAVLGLEVAGTTLLTGLWAIGMLIGFWFAKMALERGLNA
YGAATIGALVGVLAFSLVIVSAPLDSPTIFRVGQVGIGVGGALFYVGTLAATMSMATREQSGIAIGAWGAVQATVLGAAL
AIGAGISDLVPALAEAGRLPELFLHPAAGYSVVYSAEIVLLLAMVVAAWPLARFTREGESNVSPSTATSNESGY

Specific function: PucC is required for high-level transcription of the puc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pucC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR004896 [H]

Pfam domain/function: PF03209 PUCC [H]

EC number: NA

Molecular weight: Translated: 50328; Mature: 50197

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSASLLKARLRRLAVPFAEVGTRELPMTQILRLSLFQVTVGMIYVMFTGTLNRVMIHE
CCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIAASLLGAVIALPILFAPLRLLIGHRSDHRRSALGWRRVPYLWIGTLLMFGGLAVMPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHHHHH
GLLVQSEYGADAPFLASLGAALAFFLSGLGVHVTQTTGLALTNDLAPEGKLPQVVGVMYV
HHHEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHH
MLLVGMVISTGVFYVLLADFSHERLVQVLQGAALVIWALNVFALWRQEPRDPERSRVDRP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHCCCCC
RPPLSESWQSFMQRGPVVRLLVVTGIGAAGFGMQDIIIEPYGAAVLGLEVAGTTLLTGLW
CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHEECCCCCEEEEHHHHHHHHHHHHH
AIGMLIGFWFAKMALERGLNAYGAATIGALVGVLAFSLVIVSAPLDSPTIFRVGQVGIGV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCH
GGALFYVGTLAATMSMATREQSGIAIGAWGAVQATVLGAALAIGAGISDLVPALAEAGRL
HHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PELFLHPAAGYSVVYSAEIVLLLAMVVAAWPLARFTREGESNVSPSTATSNESGY
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDSASLLKARLRRLAVPFAEVGTRELPMTQILRLSLFQVTVGMIYVMFTGTLNRVMIHE
CCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIAASLLGAVIALPILFAPLRLLIGHRSDHRRSALGWRRVPYLWIGTLLMFGGLAVMPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHHHHH
GLLVQSEYGADAPFLASLGAALAFFLSGLGVHVTQTTGLALTNDLAPEGKLPQVVGVMYV
HHHEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHH
MLLVGMVISTGVFYVLLADFSHERLVQVLQGAALVIWALNVFALWRQEPRDPERSRVDRP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHCCCCC
RPPLSESWQSFMQRGPVVRLLVVTGIGAAGFGMQDIIIEPYGAAVLGLEVAGTTLLTGLW
CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHEECCCCCEEEEHHHHHHHHHHHHH
AIGMLIGFWFAKMALERGLNAYGAATIGALVGVLAFSLVIVSAPLDSPTIFRVGQVGIGV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCH
GGALFYVGTLAATMSMATREQSGIAIGAWGAVQATVLGAALAIGAGISDLVPALAEAGRL
HHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PELFLHPAAGYSVVYSAEIVLLLAMVVAAWPLARFTREGESNVSPSTATSNESGY
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9130598 [H]