| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is bchX [H]
Identifier: 121998389
GI number: 121998389
Start: 1751370
End: 1752296
Strand: Reverse
Name: bchX [H]
Synonym: Hhal_1610
Alternate gene names: 121998389
Gene position: 1752296-1751370 (Counterclockwise)
Preceding gene: 121998390
Following gene: 121998388
Centisome position: 65.42
GC content: 64.83
Gene sequence:
>927_bases ATGAGCAGCGAGCAGCCGGCGAAAGAGACCCAGATCATCGCCATCTACGGCAAGGGGGGGATCGGCAAGAGCTTCACGCT CTCCAACCTCTCCTACATGATGGCGCAGCAGGGCAAGAAGGTCCTGCTCATCGGCTGCGACCCCAAGAGTGACACCACCT CGCTGCTCTTCGGCGGGCGGGCCTGCCCGACGATCATCGACACCTCCTCGCGCAAGAAGGCAGCCGGCGAGACGCTCAGC ATCGGCGATGTCTGCTTCAAGCGCGACGGAGTCTTCGCCATGGAGCTTGGCGGGCCGGAGGTCGGCCGGGGCTGTGGCGG GCGCGGGATCATCCACGGCTTCGAGATCCTCGAGAACCTGGGCTTCCACGAGTGGGACTTCGACTACGTTCTGCTCGACT TTCTCGGCGACGTGGTCTGTGGTGGCTTCGGTCTGCCCATTGCCCGCGATCTCTGTCAGAAGGTGATCCTGGTGGGGGCC AACGACCTGCAGTCGCTGTATGTGGTCAACAATGTCTGCTCGGCGGTGGAGTACTTCAGCCGGCTGGGCGGGAGCGTTGG CGTCGCCGGTCTGGTGGTCAACAAGGACGATGGCACCGGCGAGGCGCAGGCGCTGGCTGGGCAGGCCGGCATCCCGGTGC TCTCGAGCATCCCCGCCGATGACGAGATCCGCCGCAAGAGTGCCAATTACGAGATTATCGGGTATCCCGGTGGTCCCTGG GGGCCCCTGTTCGAGCAGCTGGCGCAGAACATCGCCGGTGCTCCGCCGGTCATGCCTCAGCCGTTGAGCCACGATCAGCT GCTCGGGCTGTTCAAGAGTGACGAGGTTGGCGGCGAGGTGGAGCTTGTGCCCGCCACTCCGGAGGACATGTGCCCGCAGG GGGCGACCAGGAAGCCTTCCCTGGAGATCGTCTACGACGATACCTGA
Upstream 100 bases:
>100_bases TCACCCACTGCCTCGATGCCGCTGAGGCGGCATCGGCCTACCGGATCGCCTTCGGCGATCCCGATTGCCTCAAGATGGTC CTCGACTGGAGAAACAGCTG
Downstream 100 bases:
>100_bases GACAGACCCCGGAGAAAGGGCCATGAGTGAGCGAGCGGGACCCCATGATCAACCCCAGACCATGTGCCCGGCCTTCGGGT CGCTGCGCGTGGGACTGCGC
Product: chlorophyllide reductase iron protein subunit X
Products: NA
Alternate protein names: Chlorin reductase [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSSEQPAKETQIIAIYGKGGIGKSFTLSNLSYMMAQQGKKVLLIGCDPKSDTTSLLFGGRACPTIIDTSSRKKAAGETLS IGDVCFKRDGVFAMELGGPEVGRGCGGRGIIHGFEILENLGFHEWDFDYVLLDFLGDVVCGGFGLPIARDLCQKVILVGA NDLQSLYVVNNVCSAVEYFSRLGGSVGVAGLVVNKDDGTGEAQALAGQAGIPVLSSIPADDEIRRKSANYEIIGYPGGPW GPLFEQLAQNIAGAPPVMPQPLSHDQLLGLFKSDEVGGEVELVPATPEDMCPQGATRKPSLEIVYDDT
Sequences:
>Translated_308_residues MSSEQPAKETQIIAIYGKGGIGKSFTLSNLSYMMAQQGKKVLLIGCDPKSDTTSLLFGGRACPTIIDTSSRKKAAGETLS IGDVCFKRDGVFAMELGGPEVGRGCGGRGIIHGFEILENLGFHEWDFDYVLLDFLGDVVCGGFGLPIARDLCQKVILVGA NDLQSLYVVNNVCSAVEYFSRLGGSVGVAGLVVNKDDGTGEAQALAGQAGIPVLSSIPADDEIRRKSANYEIIGYPGGPW GPLFEQLAQNIAGAPPVMPQPLSHDQLLGLFKSDEVGGEVELVPATPEDMCPQGATRKPSLEIVYDDT >Mature_307_residues SSEQPAKETQIIAIYGKGGIGKSFTLSNLSYMMAQQGKKVLLIGCDPKSDTTSLLFGGRACPTIIDTSSRKKAAGETLSI GDVCFKRDGVFAMELGGPEVGRGCGGRGIIHGFEILENLGFHEWDFDYVLLDFLGDVVCGGFGLPIARDLCQKVILVGAN DLQSLYVVNNVCSAVEYFSRLGGSVGVAGLVVNKDDGTGEAQALAGQAGIPVLSSIPADDEIRRKSANYEIIGYPGGPWG PLFEQLAQNIAGAPPVMPQPLSHDQLLGLFKSDEVGGEVELVPATPEDMCPQGATRKPSLEIVYDDT
Specific function: Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole [H]
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010246 - InterPro: IPR000392 [H]
Pfam domain/function: PF00142 Fer4_NifH [H]
EC number: NA
Molecular weight: Translated: 32546; Mature: 32415
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEQPAKETQIIAIYGKGGIGKSFTLSNLSYMMAQQGKKVLLIGCDPKSDTTSLLFGGR CCCCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCC ACPTIIDTSSRKKAAGETLSIGDVCFKRDGVFAMELGGPEVGRGCGGRGIIHGFEILENL CCCCEECCCCCHHHCCCEEEHHHEEEECCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHC GFHEWDFDYVLLDFLGDVVCGGFGLPIARDLCQKVILVGANDLQSLYVVNNVCSAVEYFS CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH RLGGSVGVAGLVVNKDDGTGEAQALAGQAGIPVLSSIPADDEIRRKSANYEIIGYPGGPW HCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCHHHCCCCCHHHHHHCCCEEEEECCCCCH GPLFEQLAQNIAGAPPVMPQPLSHDQLLGLFKSDEVGGEVELVPATPEDMCPQGATRKPS HHHHHHHHHHHCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEEECCCHHHCCCCCCCCCC LEIVYDDT EEEEECCC >Mature Secondary Structure SSEQPAKETQIIAIYGKGGIGKSFTLSNLSYMMAQQGKKVLLIGCDPKSDTTSLLFGGR CCCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCC ACPTIIDTSSRKKAAGETLSIGDVCFKRDGVFAMELGGPEVGRGCGGRGIIHGFEILENL CCCCEECCCCCHHHCCCEEEHHHEEEECCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHC GFHEWDFDYVLLDFLGDVVCGGFGLPIARDLCQKVILVGANDLQSLYVVNNVCSAVEYFS CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH RLGGSVGVAGLVVNKDDGTGEAQALAGQAGIPVLSSIPADDEIRRKSANYEIIGYPGGPW HCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCHHHCCCCCHHHHHHCCCEEEEECCCCCH GPLFEQLAQNIAGAPPVMPQPLSHDQLLGLFKSDEVGGEVELVPATPEDMCPQGATRKPS HHHHHHHHHHHCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEEECCCHHHCCCCCCCCCC LEIVYDDT EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8437569; 10648776 [H]