| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998357
Identifier: 121998357
GI number: 121998357
Start: 1718986
End: 1719177
Strand: Reverse
Name: 121998357
Synonym: Hhal_1578
Alternate gene names: NA
Gene position: 1719177-1718986 (Counterclockwise)
Preceding gene: 121998360
Following gene: 121998356
Centisome position: 64.19
GC content: 59.38
Gene sequence:
>192_bases ATGATGAAATATCTAAAAGCAATCGGTATCGCGTTGGTGATGGGACTGTTCCTCGTCGCGCTAAGTGGCTGCAACAGCGG GCCGGCGGAGGACGCAGGCGAGGAAGTGGATGATGCGGTCGAAGAGGCGGGTGACTCCCTCGAAGAGGCTGGCGAGGATG CTGAGGATGCCGGCGAGGACGCCGGTTATTGA
Upstream 100 bases:
>100_bases GTTCGATAGCAGACAGACGAGAAGCCGAAGTCCCCCCTAGGCTGGTTCCTCCGAAAGGGGTGTTTCCGATTCTGAAGGTG GAAAAACCAGGAGAGTAATC
Downstream 100 bases:
>100_bases GTCCAGTGCATCTTCTCAAGGGGGTGCCCTGAAAAAAATCAGGTTAAGGGTCGGATCGCCGGTGCCCACGCTGCTGTTCC CCACAAGGGGCTAGCGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MMKYLKAIGIALVMGLFLVALSGCNSGPAEDAGEEVDDAVEEAGDSLEEAGEDAEDAGEDAGY
Sequences:
>Translated_63_residues MMKYLKAIGIALVMGLFLVALSGCNSGPAEDAGEEVDDAVEEAGDSLEEAGEDAEDAGEDAGY >Mature_63_residues MMKYLKAIGIALVMGLFLVALSGCNSGPAEDAGEEVDDAVEEAGDSLEEAGEDAEDAGEDAGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6411; Mature: 6411
Theoretical pI: Translated: 3.28; Mature: 3.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKYLKAIGIALVMGLFLVALSGCNSGPAEDAGEEVDDAVEEAGDSLEEAGEDAEDAGED CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCC AGY CCC >Mature Secondary Structure MMKYLKAIGIALVMGLFLVALSGCNSGPAEDAGEEVDDAVEEAGDSLEEAGEDAEDAGED CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCC AGY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA