Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998233

Identifier: 121998233

GI number: 121998233

Start: 1563625

End: 1564929

Strand: Reverse

Name: 121998233

Synonym: Hhal_1451

Alternate gene names: NA

Gene position: 1564929-1563625 (Counterclockwise)

Preceding gene: 121998235

Following gene: 121998232

Centisome position: 58.43

GC content: 70.19

Gene sequence:

>1305_bases
ATGGCTGAGGGTCGCCCGAAATACTCGCCGGAACTTCGGCGCAAGCTGGTCGAACTGGTCGAGGCGGGACACACACCGCA
GGAACTGGCGCGCACCTACGAGCCAGCGGCCAAGACGATCCGCCGCTGGTATCAGGAGGACCGACAAGAGGCCAGCGAGC
GAGGCAGCGGAAGCGCCAGCACGGGCCGCGCCGGCAAGGCAGGGAAAAAGCGTGGAGGAGCCACAGGCGCCTCGGCGTCC
TCGGGCCGTTCCGGGGAGCAGGGGGGCGCGGCGAAGACCCGGGGTAAGCCGGGGAGTAGCAAGGGGCGCCGGCTCGCGGG
CAAGCGGGTCCTGGAGAGCCCGGCGCCGGAGGCCGATGCCGGAGGGGCGACAGCGGAGTCCATCGAGGCCGAACAACCTG
AGGAGGCCCTCCCTTCGGTCACCGGCGAGGTGATCGTCGAACCCGAGCCCGAGGTCGTCGTCGATGAGCAGCGCGATCCC
GCGGATGAAGCGGAGGGCGCAGCCGACGCGGAGATGGATCCGGAGGAGCTGCTCGAGATCGGCCTCGAGCGTGCCGACCG
GGGAGACGCGGTGTACGACTCGGAGGGCCCCGAGGCGGCACTGCCGCTCTATCAGGAGGCGCTCGATCTCCTCGATGCGG
CGATCAGTGCCGGGGTCGGAGGGGATGCTGCGCGGCGCGATTGGGGCATTACCCTGGAGCGCTTCGGTGATGCCATCTTC
GAGGTCGACGGAGCGGGTGCCGCCCGGCCCTGCTACGAGGCGTGGTGCGATCTGGCCGAGGCCCTGGCCACCGAGCATGC
CACGGCCCAGTCGCTGCGGGACTGGAGCGTGGCGCTCGGTCGGTACGGCCAGGTGGTGCTGGTCGAGAAAGGGCCCGAGG
CGGCGCTACCCTACTATCAGCAGGTGGTTGAACTGCGTGAGGACATCGTCCGCGAGCGGCAGAGCGCGGACGCCTACCAG
GACTGGGCGCTGGCCCTGGAGCGCTATGGCGCCGTGCAGGAGGCGGTGGAAGGGCTGGCCGAGACGGTTGAGACCTACCG
CCATGCCCTCGAGGTCCGCGAGGCTCTCGCCGAGCAGCACGATACGCCGCAGGCCCGTCGGGCCCTAGGGGTGGCCCAGG
AGCGCCTGGCGATGGCGGTACTTGCTGCCGACGGAGCCGAGGCCGCCCTGCCGTACTTCGAACAACTGGCGGAGCTCTTC
ACCGAGCTGGCCGAGGAACTTGGTACCGAAGAGGCCGACGCCGAACGGCGGCAGGCCGATACGATGCTCGGCAAGGTGCA
GATGGCGGCGCTGGACCTAGAGTGA

Upstream 100 bases:

>100_bases
GCGTTATCATCTTAGGGTTCTTGACCCGTCCGGGAAAACGGGCTGGAGTAACCCCGTCGACGGACTCGCCGTATCCGCAT
GATCCGGAGGAAAGCATTGC

Downstream 100 bases:

>100_bases
TTCGGCCCGTGGCGGGTGACAGCCGAGCGGGTCCGGGAGCGCAGGAGGTGCGTTGGAGACGATAGAATCGATCGATTGCG
ACCTGGTTGTCGTTGGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MAEGRPKYSPELRRKLVELVEAGHTPQELARTYEPAAKTIRRWYQEDRQEASERGSGSASTGRAGKAGKKRGGATGASAS
SGRSGEQGGAAKTRGKPGSSKGRRLAGKRVLESPAPEADAGGATAESIEAEQPEEALPSVTGEVIVEPEPEVVVDEQRDP
ADEAEGAADAEMDPEELLEIGLERADRGDAVYDSEGPEAALPLYQEALDLLDAAISAGVGGDAARRDWGITLERFGDAIF
EVDGAGAARPCYEAWCDLAEALATEHATAQSLRDWSVALGRYGQVVLVEKGPEAALPYYQQVVELREDIVRERQSADAYQ
DWALALERYGAVQEAVEGLAETVETYRHALEVREALAEQHDTPQARRALGVAQERLAMAVLAADGAEAALPYFEQLAELF
TELAEELGTEEADAERRQADTMLGKVQMAALDLE

Sequences:

>Translated_434_residues
MAEGRPKYSPELRRKLVELVEAGHTPQELARTYEPAAKTIRRWYQEDRQEASERGSGSASTGRAGKAGKKRGGATGASAS
SGRSGEQGGAAKTRGKPGSSKGRRLAGKRVLESPAPEADAGGATAESIEAEQPEEALPSVTGEVIVEPEPEVVVDEQRDP
ADEAEGAADAEMDPEELLEIGLERADRGDAVYDSEGPEAALPLYQEALDLLDAAISAGVGGDAARRDWGITLERFGDAIF
EVDGAGAARPCYEAWCDLAEALATEHATAQSLRDWSVALGRYGQVVLVEKGPEAALPYYQQVVELREDIVRERQSADAYQ
DWALALERYGAVQEAVEGLAETVETYRHALEVREALAEQHDTPQARRALGVAQERLAMAVLAADGAEAALPYFEQLAELF
TELAEELGTEEADAERRQADTMLGKVQMAALDLE
>Mature_433_residues
AEGRPKYSPELRRKLVELVEAGHTPQELARTYEPAAKTIRRWYQEDRQEASERGSGSASTGRAGKAGKKRGGATGASASS
GRSGEQGGAAKTRGKPGSSKGRRLAGKRVLESPAPEADAGGATAESIEAEQPEEALPSVTGEVIVEPEPEVVVDEQRDPA
DEAEGAADAEMDPEELLEIGLERADRGDAVYDSEGPEAALPLYQEALDLLDAAISAGVGGDAARRDWGITLERFGDAIFE
VDGAGAARPCYEAWCDLAEALATEHATAQSLRDWSVALGRYGQVVLVEKGPEAALPYYQQVVELREDIVRERQSADAYQD
WALALERYGAVQEAVEGLAETVETYRHALEVREALAEQHDTPQARRALGVAQERLAMAVLAADGAEAALPYFEQLAELFT
ELAEELGTEEADAERRQADTMLGKVQMAALDLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46530; Mature: 46398

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEGRPKYSPELRRKLVELVEAGHTPQELARTYEPAAKTIRRWYQEDRQEASERGSGSAS
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TGRAGKAGKKRGGATGASASSGRSGEQGGAAKTRGKPGSSKGRRLAGKRVLESPAPEADA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
GGATAESIEAEQPEEALPSVTGEVIVEPEPEVVVDEQRDPADEAEGAADAEMDPEELLEI
CCCCHHHCCCCCCHHHHHCCCCCEEECCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHH
GLERADRGDAVYDSEGPEAALPLYQEALDLLDAAISAGVGGDAARRDWGITLERFGDAIF
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCCHHE
EVDGAGAARPCYEAWCDLAEALATEHATAQSLRDWSVALGRYGQVVLVEKGPEAALPYYQ
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
QVVELREDIVRERQSADAYQDWALALERYGAVQEAVEGLAETVETYRHALEVREALAEQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DTPQARRALGVAQERLAMAVLAADGAEAALPYFEQLAELFTELAEELGTEEADAERRQAD
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TMLGKVQMAALDLE
HHHHHHHHHHHCCC
>Mature Secondary Structure 
AEGRPKYSPELRRKLVELVEAGHTPQELARTYEPAAKTIRRWYQEDRQEASERGSGSAS
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TGRAGKAGKKRGGATGASASSGRSGEQGGAAKTRGKPGSSKGRRLAGKRVLESPAPEADA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
GGATAESIEAEQPEEALPSVTGEVIVEPEPEVVVDEQRDPADEAEGAADAEMDPEELLEI
CCCCHHHCCCCCCHHHHHCCCCCEEECCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHH
GLERADRGDAVYDSEGPEAALPLYQEALDLLDAAISAGVGGDAARRDWGITLERFGDAIF
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCCHHE
EVDGAGAARPCYEAWCDLAEALATEHATAQSLRDWSVALGRYGQVVLVEKGPEAALPYYQ
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
QVVELREDIVRERQSADAYQDWALALERYGAVQEAVEGLAETVETYRHALEVREALAEQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DTPQARRALGVAQERLAMAVLAADGAEAALPYFEQLAELFTELAEELGTEEADAERRQAD
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TMLGKVQMAALDLE
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA