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The map label for this gene is 121998136

Identifier: 121998136

GI number: 121998136

Start: 1462848

End: 1463963

Strand: Reverse

Name: 121998136

Synonym: Hhal_1354

Alternate gene names: NA

Gene position: 1463963-1462848 (Counterclockwise)

Preceding gene: 121998138

Following gene: 121998135

Centisome position: 54.66

GC content: 67.38

Gene sequence:

>1116_bases
ATGCAGCGTCATCCGTGCATCGCGCTCGTCGCGGGGATCGGTTTGATCCTCGGCGGGTGCGGAGATACCCCCAACGACGA
AAGCCGCGATGGGCCCGCGCAGGATACCCATGAGGTCGAGGATATGCTCGGCCGCAGCGTGGAAGTTCCGGAGGCGGCGG
AGCGGATCGCCACGGTCAATGTCGATGCCTTCCGCATGGCGCTGCACCTGGGTGTCGAGGATCGCCTGGTCGGAATCCCC
AGCGACATGTTCGGCTCGCGCTTTTCCGAGGCCAAGCCGATCGAAGTCCGCGCCTTCGGTCGCCTGGACGAGGTGGCCAT
GGTCGGCGGCGGCCAGCCCGGGTCGGAGTTCAGCGCCGAGCGGGTGCTCGCCACCGATCCGGATCTGTTCATCTACTGGG
CCTTCAGCCGCGGCGACGACGACGAGGCGATGGCCGAGCAGGCCGAGCGCTACCAGCAGCAGCTCGGCGTCCCCGTGGTC
GCGGTGAATACCCTGGGCCGCGAGCGGGCCTCCGAGGAGGCCATTGAGGCGCAGATCGAGCAGGCCTATCGGCTGCTCGG
CACCGTGACCGGTCGCGAAGAGCGGGCGGAAGAACTGCTCGATTTCTACGATGCGACGGTCTCCGAGGTGCAGGAGCAGG
TCGCCGACGAGGAACCGCCACGGATCTACCTGGCCCACCGGCGCAACCTCTACAACCACGTCTCCTTCTACTTTCCCGTC
GAGCAGCTGGGTGCCGAGCTGGTGACCGCTGGTCGGCCCGGTGGTGACGGCGAGGTCAGCGCCGAGGAGCTGGTGAGCTG
GGATCCGGCGCACATCTTCCTCCACACCCCGTCCCGGGCCAGCCGCGTCGCCCGTGACGAGGTCCTGGATGATGAACGGC
TCTCCGGGGTAAAGGCCGTCGAGGCGGAACGCATCCACCGCTTCAAGGGCACCTACATGGGGTGGGATCTGGCCACCGGG
CTGATCGACCTGGTGCACATGGCCCGGGTGCTCTACCCGGAGGCTATGGCCGACGTCGATCTCCGGGATCGCGGTGAGGA
GATCCTGGAGGTCTTCTACGGCGACCCCGGGCTGTACGATCGGCTCCAGGAGCTCAGCAGCCTGGACGATGACTGA

Upstream 100 bases:

>100_bases
CCGTGCGTGGCGGTGACGGTCGTTGCATCCGCGCCCCGGCGCGCCCGTTTCCGACCCGCCCCCCCGCATGGCGTACCCGG
ATCCAGTGACTGGAGGAGCC

Downstream 100 bases:

>100_bases
GTTGACCGCCGATAGCGCCTCCCGGCCAGCGCCTCCCGGCGGGCTGCTCGATGATTACGCGCGGGCGATCTGGTGGAAGA
CCCTGATCCTTTTGGGCCTG

Product: periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MQRHPCIALVAGIGLILGGCGDTPNDESRDGPAQDTHEVEDMLGRSVEVPEAAERIATVNVDAFRMALHLGVEDRLVGIP
SDMFGSRFSEAKPIEVRAFGRLDEVAMVGGGQPGSEFSAERVLATDPDLFIYWAFSRGDDDEAMAEQAERYQQQLGVPVV
AVNTLGRERASEEAIEAQIEQAYRLLGTVTGREERAEELLDFYDATVSEVQEQVADEEPPRIYLAHRRNLYNHVSFYFPV
EQLGAELVTAGRPGGDGEVSAEELVSWDPAHIFLHTPSRASRVARDEVLDDERLSGVKAVEAERIHRFKGTYMGWDLATG
LIDLVHMARVLYPEAMADVDLRDRGEEILEVFYGDPGLYDRLQELSSLDDD

Sequences:

>Translated_371_residues
MQRHPCIALVAGIGLILGGCGDTPNDESRDGPAQDTHEVEDMLGRSVEVPEAAERIATVNVDAFRMALHLGVEDRLVGIP
SDMFGSRFSEAKPIEVRAFGRLDEVAMVGGGQPGSEFSAERVLATDPDLFIYWAFSRGDDDEAMAEQAERYQQQLGVPVV
AVNTLGRERASEEAIEAQIEQAYRLLGTVTGREERAEELLDFYDATVSEVQEQVADEEPPRIYLAHRRNLYNHVSFYFPV
EQLGAELVTAGRPGGDGEVSAEELVSWDPAHIFLHTPSRASRVARDEVLDDERLSGVKAVEAERIHRFKGTYMGWDLATG
LIDLVHMARVLYPEAMADVDLRDRGEEILEVFYGDPGLYDRLQELSSLDDD
>Mature_371_residues
MQRHPCIALVAGIGLILGGCGDTPNDESRDGPAQDTHEVEDMLGRSVEVPEAAERIATVNVDAFRMALHLGVEDRLVGIP
SDMFGSRFSEAKPIEVRAFGRLDEVAMVGGGQPGSEFSAERVLATDPDLFIYWAFSRGDDDEAMAEQAERYQQQLGVPVV
AVNTLGRERASEEAIEAQIEQAYRLLGTVTGREERAEELLDFYDATVSEVQEQVADEEPPRIYLAHRRNLYNHVSFYFPV
EQLGAELVTAGRPGGDGEVSAEELVSWDPAHIFLHTPSRASRVARDEVLDDERLSGVKAVEAERIHRFKGTYMGWDLATG
LIDLVHMARVLYPEAMADVDLRDRGEEILEVFYGDPGLYDRLQELSSLDDD

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 41136; Mature: 41136

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRHPCIALVAGIGLILGGCGDTPNDESRDGPAQDTHEVEDMLGRSVEVPEAAERIATVN
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCC
VDAFRMALHLGVEDRLVGIPSDMFGSRFSEAKPIEVRAFGRLDEVAMVGGGQPGSEFSAE
HHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCCEEEEECCCHHHHHEECCCCCCCCCCCC
RVLATDPDLFIYWAFSRGDDDEAMAEQAERYQQQLGVPVVAVNTLGRERASEEAIEAQIE
CEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
QAYRLLGTVTGREERAEELLDFYDATVSEVQEQVADEEPPRIYLAHRRNLYNHVSFYFPV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHEEECH
EQLGAELVTAGRPGGDGEVSAEELVSWDPAHIFLHTPSRASRVARDEVLDDERLSGVKAV
HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHCCHHHHCCCHHH
EAERIHRFKGTYMGWDLATGLIDLVHMARVLYPEAMADVDLRDRGEEILEVFYGDPGLYD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
RLQELSSLDDD
HHHHHHCCCCC
>Mature Secondary Structure
MQRHPCIALVAGIGLILGGCGDTPNDESRDGPAQDTHEVEDMLGRSVEVPEAAERIATVN
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCC
VDAFRMALHLGVEDRLVGIPSDMFGSRFSEAKPIEVRAFGRLDEVAMVGGGQPGSEFSAE
HHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCCEEEEECCCHHHHHEECCCCCCCCCCCC
RVLATDPDLFIYWAFSRGDDDEAMAEQAERYQQQLGVPVVAVNTLGRERASEEAIEAQIE
CEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
QAYRLLGTVTGREERAEELLDFYDATVSEVQEQVADEEPPRIYLAHRRNLYNHVSFYFPV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHEEECH
EQLGAELVTAGRPGGDGEVSAEELVSWDPAHIFLHTPSRASRVARDEVLDDERLSGVKAV
HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHCCHHHHCCCHHH
EAERIHRFKGTYMGWDLATGLIDLVHMARVLYPEAMADVDLRDRGEEILEVFYGDPGLYD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
RLQELSSLDDD
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]