| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is apaH
Identifier: 121997987
GI number: 121997987
Start: 1301749
End: 1302585
Strand: Reverse
Name: apaH
Synonym: Hhal_1197
Alternate gene names: 121997987
Gene position: 1302585-1301749 (Counterclockwise)
Preceding gene: 121997988
Following gene: 121997973
Centisome position: 48.63
GC content: 66.19
Gene sequence:
>837_bases TTGGCCACGTACGCGATCGGTGATATCCAGGGATGCTGCGACCCGCTTAAACGACTGCTGGAGCAGATTCGTTTCGATCC GGCCCAGGACACCATCTGGTTCGTCGGTGACCTGGTCAATCGCGGTCCGGACTCGCTCGGGGTGCTGCGCCTGGTGCGCA ACGAGCTGGGCGACCGGGCGATTACGGTCCTCGGCAATCACGATATCCACCTGATGTCGGTCTGGAGTGGCCACGGCCGG CTGAAGAACTCCGATACCCTGCGCGGTACCCTGGATGCCCCGGATGCGGACGAGCTGATCGAGTGGCTGCGGCACCGGCC GTTGATGCACGTCGATGAGCGGATGGGCTACGCCATGGCCCACGCCGGATTGCCGCCGGCCTGGAGCGTGGCCGAGGCGC AGCTCCGGGCCCGAGAGCTGGAGCGGGCCCTGCGCGGTGAGATCCCGTTGGACGATCTGATGGACAATATCTACGGGAAC CGGCCCATCGAGTGGTCGGACGATCTGGAGGGCTACGACCGCCTGCGTTTTATCACCAACGCCTTCATGCGCATGCGCTT CGTTGACGGTGAGGGGCGGTTGCTGTTGCGCGAGAAGGGGCGCCCGGGCGCCGCCCCCGAGGGGCATTACCCGTGGTTCA TCGCCCGCCGGCGCCTGCGGGGGGCGCGCGATCCGGTGAAACTGGTCACCGGGCACTGGTCGCTACTCGGGTTCCACAAT GACGACGGCGTGCTGAGCATCGACACCGGCTGCCAGTGGGGCAACACGCTGACGGCGGTGCGTATCGACGACGGTAGCGA GGGGGTATACAGCCTCAAGTGCCCCGAACACGACTGA
Upstream 100 bases:
>100_bases GCTCGATGTGCTCGAGAAAAAGCTGCAGGCCGCCGCCGCGACGTGAGACCCTGACCGCCGCGAGATCACGTAGGCGTCAT GCATAGGAAGGAGGCTGGCA
Downstream 100 bases:
>100_bases TCGACGGCTCAGAGCGCCTCTAGCAGCCGCGGCCAGTCGAAGGCCGGGCCCGGGTCGGTCTTGCGGTCGGGGGCGATGTC GCTGTGGCCGACGATGCGGC
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MATYAIGDIQGCCDPLKRLLEQIRFDPAQDTIWFVGDLVNRGPDSLGVLRLVRNELGDRAITVLGNHDIHLMSVWSGHGR LKNSDTLRGTLDAPDADELIEWLRHRPLMHVDERMGYAMAHAGLPPAWSVAEAQLRARELERALRGEIPLDDLMDNIYGN RPIEWSDDLEGYDRLRFITNAFMRMRFVDGEGRLLLREKGRPGAAPEGHYPWFIARRRLRGARDPVKLVTGHWSLLGFHN DDGVLSIDTGCQWGNTLTAVRIDDGSEGVYSLKCPEHD
Sequences:
>Translated_278_residues MATYAIGDIQGCCDPLKRLLEQIRFDPAQDTIWFVGDLVNRGPDSLGVLRLVRNELGDRAITVLGNHDIHLMSVWSGHGR LKNSDTLRGTLDAPDADELIEWLRHRPLMHVDERMGYAMAHAGLPPAWSVAEAQLRARELERALRGEIPLDDLMDNIYGN RPIEWSDDLEGYDRLRFITNAFMRMRFVDGEGRLLLREKGRPGAAPEGHYPWFIARRRLRGARDPVKLVTGHWSLLGFHN DDGVLSIDTGCQWGNTLTAVRIDDGSEGVYSLKCPEHD >Mature_277_residues ATYAIGDIQGCCDPLKRLLEQIRFDPAQDTIWFVGDLVNRGPDSLGVLRLVRNELGDRAITVLGNHDIHLMSVWSGHGRL KNSDTLRGTLDAPDADELIEWLRHRPLMHVDERMGYAMAHAGLPPAWSVAEAQLRARELERALRGEIPLDDLMDNIYGNR PIEWSDDLEGYDRLRFITNAFMRMRFVDGEGRLLLREKGRPGAAPEGHYPWFIARRRLRGARDPVKLVTGHWSLLGFHND DGVLSIDTGCQWGNTLTAVRIDDGSEGVYSLKCPEHD
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=266, Percent_Identity=46.6165413533835, Blast_Score=227, Evalue=5e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 31442; Mature: 31311
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYAIGDIQGCCDPLKRLLEQIRFDPAQDTIWFVGDLVNRGPDSLGVLRLVRNELGDRA CCCEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCEE ITVLGNHDIHLMSVWSGHGRLKNSDTLRGTLDAPDADELIEWLRHRPLMHVDERMGYAMA EEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHH HAGLPPAWSVAEAQLRARELERALRGEIPLDDLMDNIYGNRPIEWSDDLEGYDRLRFITN HCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AFMRMRFVDGEGRLLLREKGRPGAAPEGHYPWFIARRRLRGARDPVKLVTGHWSLLGFHN HHHHEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCEEEEEEEC DDGVLSIDTGCQWGNTLTAVRIDDGSEGVYSLKCPEHD CCCEEEECCCCCCCCEEEEEEECCCCCCEEEECCCCCC >Mature Secondary Structure ATYAIGDIQGCCDPLKRLLEQIRFDPAQDTIWFVGDLVNRGPDSLGVLRLVRNELGDRA CCEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCEE ITVLGNHDIHLMSVWSGHGRLKNSDTLRGTLDAPDADELIEWLRHRPLMHVDERMGYAMA EEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHH HAGLPPAWSVAEAQLRARELERALRGEIPLDDLMDNIYGNRPIEWSDDLEGYDRLRFITN HCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AFMRMRFVDGEGRLLLREKGRPGAAPEGHYPWFIARRRLRGARDPVKLVTGHWSLLGFHN HHHHEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCEEEEEEEC DDGVLSIDTGCQWGNTLTAVRIDDGSEGVYSLKCPEHD CCCEEEECCCCCCCCEEEEEEECCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA