Click here to switch to the map view.

The map label for this gene is 121997954

Identifier: 121997954

GI number: 121997954

Start: 1271066

End: 1271851

Strand: Reverse

Name: 121997954

Synonym: Hhal_1164

Alternate gene names: NA

Gene position: 1271851-1271066 (Counterclockwise)

Preceding gene: 121997955

Following gene: 121997950

Centisome position: 47.48

GC content: 65.27

Gene sequence:

>786_bases
ATGAGTGAACAGCTTAAGACGCAGGCGGGGAGTGGTTCGCAGGAGCTGCCGGAGCGGATTCGCATCCGGGACCGGGGCGG
CATCGCCCTGCACTGGTTTAACGCCGGATGCTGGCTGGTGCTGGTCCTGACCGGGCTTGGGCTGAGTACCGGCGATAGCT
GGCGACTGGTGCCGGCCTTCTGGCCGGAGCTGATGCAGGGCCTGTTTGGCGGCAACCGGCTGCTGATCAACGTCCACATC
GCGGTCGGTCTGGTATGGATCGTCGGTGTCCTCACTTACCTGGCGCTGCGCTGGCGCAGCCACGTGGTGCCTTTCCTGCA
CGAGGTCCTGGTCGTCACGCCGCGCGATTTGACCCGTTCGCTGTGGATCACCGGCGTGATCCTGGGGCGTCTCCTCGGCT
TGTTCCGCCAGGTCGAACTCCCGCCCACCTACAAGCTCAACGCCGCCCAGCGGCTGCTGGGCACTACGGTCGTTCTGGGC
TCGGTGGCCATAGCGCTCAGTGGGCTCTACCTCTTTCTGGCGCCATCGCTGCTCAGCTTCCCGGACAGCTCCGTCTACGG
CGCGCTCTACCGCACGTCTGTGCTGCTGCATGCCGCTGCGGTCTACCTGATCCTCATGGCGCTGGTCGCCCATATCTACT
TCTCGACCGTGGAGCACAGGCCGGCCCTGGAGGGGATGCGCTCAGGCTATCTCAGCCTGGAATTCCTGCGCCGCGAGCGC
CCGCTTTGGTATCAGGAGATCGTGGAGCGGTATCGCTCCGGGGAGTCCTCGGTCCGCGATGAATGA

Upstream 100 bases:

>100_bases
TTCGCGGTAGCCGGAGCCAAGCGATTCCTCGACCGCCGGCGCGGGATCGCGGAGCAGGAGCCGTCGGGCGAGAAGCAGGC
GACTCCGCGAGGGGGTGACG

Downstream 100 bases:

>100_bases
TGGTGGGTGTCCGGTCGCCGGGCCCGGGCGGGACCCTGTTCGCCCGGGCCCGGCTGGGCGCTTAGCCGAAGATATCCTCG
GTGATCGATTCGTACCAGCC

Product: formate dehydrogenase subunit gamma

Products: CO2; NADH

Alternate protein names: Formate Dehydrogenase Subunit Gamma; Cytochrome B/B6 Domain-Containing Protein

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSEQLKTQAGSGSQELPERIRIRDRGGIALHWFNAGCWLVLVLTGLGLSTGDSWRLVPAFWPELMQGLFGGNRLLINVHI
AVGLVWIVGVLTYLALRWRSHVVPFLHEVLVVTPRDLTRSLWITGVILGRLLGLFRQVELPPTYKLNAAQRLLGTTVVLG
SVAIALSGLYLFLAPSLLSFPDSSVYGALYRTSVLLHAAAVYLILMALVAHIYFSTVEHRPALEGMRSGYLSLEFLRRER
PLWYQEIVERYRSGESSVRDE

Sequences:

>Translated_261_residues
MSEQLKTQAGSGSQELPERIRIRDRGGIALHWFNAGCWLVLVLTGLGLSTGDSWRLVPAFWPELMQGLFGGNRLLINVHI
AVGLVWIVGVLTYLALRWRSHVVPFLHEVLVVTPRDLTRSLWITGVILGRLLGLFRQVELPPTYKLNAAQRLLGTTVVLG
SVAIALSGLYLFLAPSLLSFPDSSVYGALYRTSVLLHAAAVYLILMALVAHIYFSTVEHRPALEGMRSGYLSLEFLRRER
PLWYQEIVERYRSGESSVRDE
>Mature_260_residues
SEQLKTQAGSGSQELPERIRIRDRGGIALHWFNAGCWLVLVLTGLGLSTGDSWRLVPAFWPELMQGLFGGNRLLINVHIA
VGLVWIVGVLTYLALRWRSHVVPFLHEVLVVTPRDLTRSLWITGVILGRLLGLFRQVELPPTYKLNAAQRLLGTTVVLGS
VAIALSGLYLFLAPSLLSFPDSSVYGALYRTSVLLHAAAVYLILMALVAHIYFSTVEHRPALEGMRSGYLSLEFLRRERP
LWYQEIVERYRSGESSVRDE

Specific function: Unknown

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.1.2

Molecular weight: Translated: 29251; Mature: 29120

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQLKTQAGSGSQELPERIRIRDRGGIALHWFNAGCWLVLVLTGLGLSTGDSWRLVPAF
CCCCHHCCCCCCHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEHHHH
WPELMQGLFGGNRLLINVHIAVGLVWIVGVLTYLALRWRSHVVPFLHEVLVVTPRDLTRS
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LWITGVILGRLLGLFRQVELPPTYKLNAAQRLLGTTVVLGSVAIALSGLYLFLAPSLLSF
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDSSVYGALYRTSVLLHAAAVYLILMALVAHIYFSTVEHRPALEGMRSGYLSLEFLRRER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCC
PLWYQEIVERYRSGESSVRDE
CCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SEQLKTQAGSGSQELPERIRIRDRGGIALHWFNAGCWLVLVLTGLGLSTGDSWRLVPAF
CCCHHCCCCCCHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEHHHH
WPELMQGLFGGNRLLINVHIAVGLVWIVGVLTYLALRWRSHVVPFLHEVLVVTPRDLTRS
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LWITGVILGRLLGLFRQVELPPTYKLNAAQRLLGTTVVLGSVAIALSGLYLFLAPSLLSF
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDSSVYGALYRTSVLLHAAAVYLILMALVAHIYFSTVEHRPALEGMRSGYLSLEFLRRER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCC
PLWYQEIVERYRSGESSVRDE
CCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD+

Specific reaction: formate + NAD+ = CO2 + NADH

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA