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The map label for this gene is ygcF [C]

Identifier: 121997906

GI number: 121997906

Start: 1210946

End: 1211575

Strand: Reverse

Name: ygcF [C]

Synonym: Hhal_1115

Alternate gene names: 121997906

Gene position: 1211575-1210946 (Counterclockwise)

Preceding gene: 121997907

Following gene: 121997905

Centisome position: 45.23

GC content: 70.48

Gene sequence:

>630_bases
GTGAGCTACGCCGTCCACAGTCTGTTCTACACCCTGCAGGGCGAGGGTGCGCGCAGTGGCCGGCCGGCGGTCTTCCTGCG
CTTCGCCGGTTGTAACCTGTGGAGTGGCCGGGAGGCCGATCGAGCGACGGCGGTCTGCACCTTCTGCGATACCGATTTCG
TGGGTACAGGTGGCCCCGGTGGCGGCCGCTTCGCCGACGCCCCCGAGCTGGCGGCGGCGGTGGCGGCGTGGTGGCCCGGC
GGTGGTGAGCCCTACGTGGTCTGTACCGGCGGTGAGCCGGCGCTGCAGCTGGACGCGGCCCTCGTGGCGGCGCTGCACGC
TCGGGGGTTCGAGGTCGCGGTGGAGACCAACGGCACGCTGCCCCTGCCGGCCGGTGTGGACTGGATCTGCGTGAGCCCCA
AGGCAGGGACCGAGCTCGCCATCACCGCCGGCGATGAACTCAAGCTGATCTATCCGCAGCCCGGGGCCGAGCCGCAGCGG
TTCACCCACCTGGCGTTCCGCCGCTTCTACCTCCAGCCCCTCGATGACAACCAGCGCGGTGCCCATACCCGCGCCGTGCT
GGATTACTGCCGCGGGCATCCCCAGTGGTGGCTGAGCGTCCAGATCCACAAGGACCTGGGTATCCCCTGA

Upstream 100 bases:

>100_bases
TTGGGCGGCCCGTGCCGCGCGCCAGCGCCTGCCGGAGCTCCTTCGCGTCGACTGCTACGAGCGGGATGGTGTCGGGGCCA
TCGCCTGGCCGGAGTGAGCG

Downstream 100 bases:

>100_bases
AGCGGTCGAGGCCGCTTGCGCTGAGCCTGGGACCGAGGCAACGTGAATTCTGGGGTCGGCCAATGGCGAGGGGAGGGCAT
CATGTTCGAGGTCAGTCTGG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Organic Radical Activating; Organic Radical Activating-Like Protein; Radical SAM Domain Protein; Queuosine Biosynthesis Protein QueE; Organic Radical Activating Protein; Radical Sam Domain Protein; Organic Radical Activating Protein; Radical SAM; GntS Family Protein; 6- Pyruvoyltetrahydropterin 2-Reductase; Radical SAM Superfamily

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSYAVHSLFYTLQGEGARSGRPAVFLRFAGCNLWSGREADRATAVCTFCDTDFVGTGGPGGGRFADAPELAAAVAAWWPG
GGEPYVVCTGGEPALQLDAALVAALHARGFEVAVETNGTLPLPAGVDWICVSPKAGTELAITAGDELKLIYPQPGAEPQR
FTHLAFRRFYLQPLDDNQRGAHTRAVLDYCRGHPQWWLSVQIHKDLGIP

Sequences:

>Translated_209_residues
MSYAVHSLFYTLQGEGARSGRPAVFLRFAGCNLWSGREADRATAVCTFCDTDFVGTGGPGGGRFADAPELAAAVAAWWPG
GGEPYVVCTGGEPALQLDAALVAALHARGFEVAVETNGTLPLPAGVDWICVSPKAGTELAITAGDELKLIYPQPGAEPQR
FTHLAFRRFYLQPLDDNQRGAHTRAVLDYCRGHPQWWLSVQIHKDLGIP
>Mature_208_residues
SYAVHSLFYTLQGEGARSGRPAVFLRFAGCNLWSGREADRATAVCTFCDTDFVGTGGPGGGRFADAPELAAAVAAWWPGG
GEPYVVCTGGEPALQLDAALVAALHARGFEVAVETNGTLPLPAGVDWICVSPKAGTELAITAGDELKLIYPQPGAEPQRF
THLAFRRFYLQPLDDNQRGAHTRAVLDYCRGHPQWWLSVQIHKDLGIP

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22395; Mature: 22264

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAVHSLFYTLQGEGARSGRPAVFLRFAGCNLWSGREADRATAVCTFCDTDFVGTGGPG
CCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
GGRFADAPELAAAVAAWWPGGGEPYVVCTGGEPALQLDAALVAALHARGFEVAVETNGTL
CCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCE
PLPAGVDWICVSPKAGTELAITAGDELKLIYPQPGAEPQRFTHLAFRRFYLQPLDDNQRG
ECCCCCCEEEECCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
AHTRAVLDYCRGHPQWWLSVQIHKDLGIP
CHHHHHHHHHCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure 
SYAVHSLFYTLQGEGARSGRPAVFLRFAGCNLWSGREADRATAVCTFCDTDFVGTGGPG
CEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
GGRFADAPELAAAVAAWWPGGGEPYVVCTGGEPALQLDAALVAALHARGFEVAVETNGTL
CCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCE
PLPAGVDWICVSPKAGTELAITAGDELKLIYPQPGAEPQRFTHLAFRRFYLQPLDDNQRG
ECCCCCCEEEECCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
AHTRAVLDYCRGHPQWWLSVQIHKDLGIP
CHHHHHHHHHCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA