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The map label for this gene is yjbQ [C]

Identifier: 121997893

GI number: 121997893

Start: 1194985

End: 1195404

Strand: Reverse

Name: yjbQ [C]

Synonym: Hhal_1102

Alternate gene names: 121997893

Gene position: 1195404-1194985 (Counterclockwise)

Preceding gene: 121997895

Following gene: 121997887

Centisome position: 44.63

GC content: 69.29

Gene sequence:

>420_bases
ATGAAGATCGAACAGCAGACCCTCACTGTCCAGACCCGCGGACGCGGCACCCATGAGCTCACCCGCTCGTTGGCCGAGGC
GATCCGCGAGCAGGGCGTGACCCGCGGCCTGGCGCACGCCTTCTGCCACCACACCAGCGCCTCGCTGATGATCACCGAGA
ACGCCGACCCCACGGTCCGTGCCGACCTGGAGCGGTTCATGGCCCGGGTGGCGCCGGATGGCGACCCGATGTACGAGCAC
GATATGGAGGGCCCGGACGACATGCCGGCCCACATTCGCAGCGTGCTCAGTGGCAGCGGCGTCACTGTGCCGATCAGCAG
CGGCCGGCCGGCGCTGGGGACCTGGCAGGGCCTCTACCTCTGGGAGCACCGCAGCGCAGGGCACAGCCGGAAGGTGACGC
TGACGTTGTTCGGGGAGTGA

Upstream 100 bases:

>100_bases
GTCCCGTCATGGGGCGCCCCGAGGGCCGCGGCAGCGGCTTGAGCCGACCCGGGGGCAGCGCTACCGTGGCGGATCCGAAT
CAGCGAGCGGGAGTCCGGCC

Downstream 100 bases:

>100_bases
CGGTGCCGGGGCACGATCGGGTCATGTGGGGCGCCGAGGAGGTGAACAGGAACGGAGCGGTTGTTAGGTAACCTACTGAT
CGTTCCGGATAAGTGGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKIEQQTLTVQTRGRGTHELTRSLAEAIREQGVTRGLAHAFCHHTSASLMITENADPTVRADLERFMARVAPDGDPMYEH
DMEGPDDMPAHIRSVLSGSGVTVPISSGRPALGTWQGLYLWEHRSAGHSRKVTLTLFGE

Sequences:

>Translated_139_residues
MKIEQQTLTVQTRGRGTHELTRSLAEAIREQGVTRGLAHAFCHHTSASLMITENADPTVRADLERFMARVAPDGDPMYEH
DMEGPDDMPAHIRSVLSGSGVTVPISSGRPALGTWQGLYLWEHRSAGHSRKVTLTLFGE
>Mature_139_residues
MKIEQQTLTVQTRGRGTHELTRSLAEAIREQGVTRGLAHAFCHHTSASLMITENADPTVRADLERFMARVAPDGDPMYEH
DMEGPDDMPAHIRSVLSGSGVTVPISSGRPALGTWQGLYLWEHRSAGHSRKVTLTLFGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=139, Percent_Identity=48.9208633093525, Blast_Score=128, Evalue=1e-31,
Organism=Drosophila melanogaster, GI221476594, Length=135, Percent_Identity=42.962962962963, Blast_Score=119, Evalue=5e-28,
Organism=Drosophila melanogaster, GI221476589, Length=135, Percent_Identity=42.962962962963, Blast_Score=119, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15304; Mature: 15304

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00894 HTH_DEOR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEQQTLTVQTRGRGTHELTRSLAEAIREQGVTRGLAHAFCHHTSASLMITENADPTVR
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHH
ADLERFMARVAPDGDPMYEHDMEGPDDMPAHIRSVLSGSGVTVPISSGRPALGTWQGLYL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE
WEHRSAGHSRKVTLTLFGE
EECCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKIEQQTLTVQTRGRGTHELTRSLAEAIREQGVTRGLAHAFCHHTSASLMITENADPTVR
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHH
ADLERFMARVAPDGDPMYEHDMEGPDDMPAHIRSVLSGSGVTVPISSGRPALGTWQGLYL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE
WEHRSAGHSRKVTLTLFGE
EECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]