| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is tatC [H]
Identifier: 121997878
GI number: 121997878
Start: 1183100
End: 1183894
Strand: Reverse
Name: tatC [H]
Synonym: Hhal_1087
Alternate gene names: 121997878
Gene position: 1183894-1183100 (Counterclockwise)
Preceding gene: 121997879
Following gene: 121997877
Centisome position: 44.2
GC content: 64.53
Gene sequence:
>795_bases GTGAGCGCCGGCGGTCCCGAGCAGAATCAGGGTGGTGAAGAAAAGCTGCAGGAGGCGCCGCTGCTTAGCCACCTGAAGGA GTTCCGCGATCGCCTGCTGCGCGTCGTGGTGGTGGTCCTCGGCGCGTTCCTGCTCTTCTACCCGTTCCGCGATACCCTCT ATCGCTGGATCTCGGGGCCGCTGCAGGAAGTCCTCCCCGAGGGCACCTCGATGATCGCCATCAAGGTGGCCTCGCCCTTC CTGATCCCCATGAAGCTGGCCCTGGTGGCGGCCATCTTCGTCACCGTGCCGTACATCCTTTACCAGCTCTGGGCCTTCGT GGCGCCGGGGCTCTATCGCCACGAGCGGCGGATGATCTGGCCGCTGCTGATCTCCAGCACCGGCTTGTTCTACCTCGGTG CGGCCTTCGCCTACTTTGTGGTCTTCCCGATCGCCTTCCGCTTCTTCGCCCTGGTTTCCCCGGAAGGCGTGCAGATGATG ACGGATATCGGCGAATACCTGTCGTTCGTGCTGACCCTGTTCTTCGCCTTTGGTGCGGCCTTTCAGGTGCCCATCGCCAC CATTCTGCTGGTGCGCAGTGGCATCTCCACCCGCGAGAGCCTGGCGGCCAAGCGCCCCTACGTGATCGTCGGCGCCTTCG TGGTCGGCATGATGCTCACACCGCCGGATGTCCTCTCGCAGGTGCTGCTGGCTGTGCCGGTGTGGCTGCTTTTCGAGATC GGCATCCTGCTCGCCGGACGAACACAGCCATCCGCGGCCGCCTCACCGGATGGCAGCGGGGGCGATCAAGGTTAG
Upstream 100 bases:
>100_bases TGGAGCGGGAGACCCGAGAGGCCCGCCGTGCTGCCAGGCTCCGTAAGGCCGAGGAGTCCGAGGGTGGCAAGCCACGGGCT GCCGATAAGGAGCAGGATCA
Downstream 100 bases:
>100_bases CGCGGGGGTGGCGGGATGGACCCGCAGCGGCACTGCGCCCCCGCGCACGGGTTCTCTCCGTTCGTTCCGAGCCTTAGAGT GGTGGCATGACTGATCGCGG
Product: Sec-independent protein translocase subunit TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSAGGPEQNQGGEEKLQEAPLLSHLKEFRDRLLRVVVVVLGAFLLFYPFRDTLYRWISGPLQEVLPEGTSMIAIKVASPF LIPMKLALVAAIFVTVPYILYQLWAFVAPGLYRHERRMIWPLLISSTGLFYLGAAFAYFVVFPIAFRFFALVSPEGVQMM TDIGEYLSFVLTLFFAFGAAFQVPIATILLVRSGISTRESLAAKRPYVIVGAFVVGMMLTPPDVLSQVLLAVPVWLLFEI GILLAGRTQPSAAASPDGSGGDQG
Sequences:
>Translated_264_residues MSAGGPEQNQGGEEKLQEAPLLSHLKEFRDRLLRVVVVVLGAFLLFYPFRDTLYRWISGPLQEVLPEGTSMIAIKVASPF LIPMKLALVAAIFVTVPYILYQLWAFVAPGLYRHERRMIWPLLISSTGLFYLGAAFAYFVVFPIAFRFFALVSPEGVQMM TDIGEYLSFVLTLFFAFGAAFQVPIATILLVRSGISTRESLAAKRPYVIVGAFVVGMMLTPPDVLSQVLLAVPVWLLFEI GILLAGRTQPSAAASPDGSGGDQG >Mature_263_residues SAGGPEQNQGGEEKLQEAPLLSHLKEFRDRLLRVVVVVLGAFLLFYPFRDTLYRWISGPLQEVLPEGTSMIAIKVASPFL IPMKLALVAAIFVTVPYILYQLWAFVAPGLYRHERRMIWPLLISSTGLFYLGAAFAYFVVFPIAFRFFALVSPEGVQMMT DIGEYLSFVLTLFFAFGAAFQVPIATILLVRSGISTRESLAAKRPYVIVGAFVVGMMLTPPDVLSQVLLAVPVWLLFEIG ILLAGRTQPSAAASPDGSGGDQG
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=226, Percent_Identity=56.1946902654867, Blast_Score=267, Evalue=4e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 28952; Mature: 28820
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGGPEQNQGGEEKLQEAPLLSHLKEFRDRLLRVVVVVLGAFLLFYPFRDTLYRWISGP CCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LQEVLPEGTSMIAIKVASPFLIPMKLALVAAIFVTVPYILYQLWAFVAPGLYRHERRMIW HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH PLLISSTGLFYLGAAFAYFVVFPIAFRFFALVSPEGVQMMTDIGEYLSFVLTLFFAFGAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FQVPIATILLVRSGISTRESLAAKRPYVIVGAFVVGMMLTPPDVLSQVLLAVPVWLLFEI HHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH GILLAGRTQPSAAASPDGSGGDQG HHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAGGPEQNQGGEEKLQEAPLLSHLKEFRDRLLRVVVVVLGAFLLFYPFRDTLYRWISGP CCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LQEVLPEGTSMIAIKVASPFLIPMKLALVAAIFVTVPYILYQLWAFVAPGLYRHERRMIW HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH PLLISSTGLFYLGAAFAYFVVFPIAFRFFALVSPEGVQMMTDIGEYLSFVLTLFFAFGAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FQVPIATILLVRSGISTRESLAAKRPYVIVGAFVVGMMLTPPDVLSQVLLAVPVWLLFEI HHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH GILLAGRTQPSAAASPDGSGGDQG HHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]