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The map label for this gene is ylbK [H]

Identifier: 121997872

GI number: 121997872

Start: 1174697

End: 1175665

Strand: Reverse

Name: ylbK [H]

Synonym: Hhal_1081

Alternate gene names: 121997872

Gene position: 1175665-1174697 (Counterclockwise)

Preceding gene: 121997873

Following gene: 121997871

Centisome position: 43.89

GC content: 66.56

Gene sequence:

>969_bases
GTGACACGAGACCTGCCCGATCGCCCGCGACGGCATACCCTGAAGATGATGGTCAGCGCATCCATGTTGCCGCTGGTGGG
GATGTCGGCGGCCCCCCTCTCCGGTGCCCGGGCCGCCGAAGGGGAGGGCGGGCCGCGTATTGGCCTGGCGCTGGGCAGTG
GCGGGGCCCGCGGCCTGTCCCACCTGCTGGTCTTCGAGGCCCTCGAGGAACTCGGTGTGCGGCCGCACCGGATCAGTGGC
TGCAGCATCGGCGCCATCATGGGCGCGCTCTACGCGGCCGGCCTGAGCGCCGAAGAGATCCGCGCGGGGATCGACGAACT
CGTCGCCGATCAGGACGAGAACTGGCTGCGGACCCTGATGGGCGGCAAGTGGCGACAGTGGCTGGACTTCGTGCAGCCGT
CCGGGCGCGACGGCGGGCTGGTAGAGTCCGACGCCTTTATCGCTCACCTGCGTAAAAAGACCGGTGTATCGCGCTTCGGT
GAACTCGAGATCCCGCTGCAGGTGGTGGCCACCGACTACTGGGAGCGTGAGGCGGTGGTCTTCGACGCCGGGGCGCTCTG
GCCAGCGGTGCAGGCGAGCATGGCGATGCCCGGGCTGTTCAGCCCGGTGTCCTACCGCGACCGCGTGCTGGTGGATGGCG
GGCTGACCAATCCGGTGCCCTTCGATCTGCTTAGCGAGGATTGTGATGTGGTCGTGGCGGTGAACGTGCTCGGCAGTCGC
GAGGAGGGCGGGGGCGAAACCCTGAACAATCCCGCCTATCTGGACAACATCTTCAACACCTTCCAGATCATGCAGTACTC
GATCCTGCAAGAGAAGAGACGGCGCGAGGCGCCGGATATTCTCATCAGCCCGGAGATCCGCGATATCCGCGTGCTCGACT
TCCACAAGGTGGACACCATCCTCGAGCAGGCGCAGTCCGAGGTCGATGCCCTGCAAGACGAGCTGCGCGAGCTGCTCGAC
CAGTGGTGA

Upstream 100 bases:

>100_bases
TCGCCGTGACGACAGCGGCATCCGGACTTGCTATGTTCAGAGGGTGCCCTGCAGCAGCACCCGGTATCACGCCCCCACGC
CCCCGAGTCGAGGATCCGAA

Downstream 100 bases:

>100_bases
TGCGGGCCGATGGTTGAACTGTTCGACACCGGCCGGATCATCGACGCCATCCTGCTGCTGATGGTCCTCGAGGGGGCGCT
CCTCTATCTGGTTTACCGGC

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTRDLPDRPRRHTLKMMVSASMLPLVGMSAAPLSGARAAEGEGGPRIGLALGSGGARGLSHLLVFEALEELGVRPHRISG
CSIGAIMGALYAAGLSAEEIRAGIDELVADQDENWLRTLMGGKWRQWLDFVQPSGRDGGLVESDAFIAHLRKKTGVSRFG
ELEIPLQVVATDYWEREAVVFDAGALWPAVQASMAMPGLFSPVSYRDRVLVDGGLTNPVPFDLLSEDCDVVVAVNVLGSR
EEGGGETLNNPAYLDNIFNTFQIMQYSILQEKRRREAPDILISPEIRDIRVLDFHKVDTILEQAQSEVDALQDELRELLD
QW

Sequences:

>Translated_322_residues
MTRDLPDRPRRHTLKMMVSASMLPLVGMSAAPLSGARAAEGEGGPRIGLALGSGGARGLSHLLVFEALEELGVRPHRISG
CSIGAIMGALYAAGLSAEEIRAGIDELVADQDENWLRTLMGGKWRQWLDFVQPSGRDGGLVESDAFIAHLRKKTGVSRFG
ELEIPLQVVATDYWEREAVVFDAGALWPAVQASMAMPGLFSPVSYRDRVLVDGGLTNPVPFDLLSEDCDVVVAVNVLGSR
EEGGGETLNNPAYLDNIFNTFQIMQYSILQEKRRREAPDILISPEIRDIRVLDFHKVDTILEQAQSEVDALQDELRELLD
QW
>Mature_321_residues
TRDLPDRPRRHTLKMMVSASMLPLVGMSAAPLSGARAAEGEGGPRIGLALGSGGARGLSHLLVFEALEELGVRPHRISGC
SIGAIMGALYAAGLSAEEIRAGIDELVADQDENWLRTLMGGKWRQWLDFVQPSGRDGGLVESDAFIAHLRKKTGVSRFGE
LEIPLQVVATDYWEREAVVFDAGALWPAVQASMAMPGLFSPVSYRDRVLVDGGLTNPVPFDLLSEDCDVVVAVNVLGSRE
EGGGETLNNPAYLDNIFNTFQIMQYSILQEKRRREAPDILISPEIRDIRVLDFHKVDTILEQAQSEVDALQDELRELLDQ
W

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=210, Percent_Identity=32.8571428571429, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI116256487, Length=210, Percent_Identity=32.8571428571429, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI260656039, Length=210, Percent_Identity=32.8571428571429, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI260656037, Length=210, Percent_Identity=32.8571428571429, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI260656043, Length=210, Percent_Identity=32.8571428571429, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI148727290, Length=210, Percent_Identity=31.4285714285714, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI148727335, Length=210, Percent_Identity=31.4285714285714, Blast_Score=75, Evalue=8e-14,
Organism=Escherichia coli, GI226510936, Length=309, Percent_Identity=27.831715210356, Blast_Score=108, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6323581, Length=285, Percent_Identity=27.0175438596491, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281376913, Length=197, Percent_Identity=34.010152284264, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 35321; Mature: 35190

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDLPDRPRRHTLKMMVSASMLPLVGMSAAPLSGARAAEGEGGPRIGLALGSGGARGLS
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
HLLVFEALEELGVRPHRISGCSIGAIMGALYAAGLSAEEIRAGIDELVADQDENWLRTLM
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
GGKWRQWLDFVQPSGRDGGLVESDAFIAHLRKKTGVSRFGELEIPLQVVATDYWEREAVV
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHCCCCCEEE
FDAGALWPAVQASMAMPGLFSPVSYRDRVLVDGGLTNPVPFDLLSEDCDVVVAVNVLGSR
EECCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCEEEEEEECCCC
EEGGGETLNNPAYLDNIFNTFQIMQYSILQEKRRREAPDILISPEIRDIRVLDFHKVDTI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEECHHHHHHH
LEQAQSEVDALQDELRELLDQW
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRDLPDRPRRHTLKMMVSASMLPLVGMSAAPLSGARAAEGEGGPRIGLALGSGGARGLS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
HLLVFEALEELGVRPHRISGCSIGAIMGALYAAGLSAEEIRAGIDELVADQDENWLRTLM
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
GGKWRQWLDFVQPSGRDGGLVESDAFIAHLRKKTGVSRFGELEIPLQVVATDYWEREAVV
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHCCCCCEEE
FDAGALWPAVQASMAMPGLFSPVSYRDRVLVDGGLTNPVPFDLLSEDCDVVVAVNVLGSR
EECCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCEEEEEEECCCC
EEGGGETLNNPAYLDNIFNTFQIMQYSILQEKRRREAPDILISPEIRDIRVLDFHKVDTI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEECHHHHHHH
LEQAQSEVDALQDELRELLDQW
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]