| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is djlA [H]
Identifier: 121997701
GI number: 121997701
Start: 983497
End: 984303
Strand: Reverse
Name: djlA [H]
Synonym: Hhal_0910
Alternate gene names: 121997701
Gene position: 984303-983497 (Counterclockwise)
Preceding gene: 121997709
Following gene: 121997700
Centisome position: 36.75
GC content: 73.48
Gene sequence:
>807_bases ATGCAGCAGCCGTACCGCATAGTTCGACGCTGGTCAGGGCGGATTCTCGCGACCCTGGGCGGCTGGCTCATTGCCGGCTG GAGCGGAGCGGTGGCGGGGCTGGCCGTGGGTACCCTGATCGACCTGTGGGTGCGTCTGACCCAGGTCGTCGGGCTGGTGT GGAGCGGCTGCGGCCTGGCCCGCACGCAGCGGCTGTTCCTGGGGGCCACCGCCCTGACCATGGGCCACCTGGCCAAGAGC GATGGCCGGGTCAGCGAGCAGGAGATCGCCGCGGCCCGGCGGGTGCTTGGCGAGTTGCCGCTGGATGAGCGCGGCCGCCG GCGGGCGATCACCATCTTCAACCGCGGCAAGGCGCCGGATGCCCCCCTGCGCCCGGTGCTCGGCCTGCTGCGGTTGATGG GGCGCAACCGCCCCCAGGAGCTGGCCCGCTTCCTGGAGTTCCAGCTGCGCGTGGCGTTGGCCGACGGCACCCTGGACAAG CCCCGGGAACGGCTGCTGCGCCGCGTCTGGCGCCAGGTCGGGGTGTCGCAGGCCGACCTGGACGCGCGGCTGGCCCAGCT CCAGCGCGGCAAGGTGCGCCGCGGTGTGCGCCTGACGCTGGACCACGCCTACCGGCTGCTGGGACTGAGCCGCGGGGCGA GCAGCGACGAGGTGCGCCAGGCGTACCGGCGCGCCATCAGCCAGAGTCACCCCGACCGGCTGATCTCCCGCGGTGTCTCC CAGGCGGAGCTGGAGGCCGCCGGCGAACGGACCCGACAGATCCGGGCCGCCTACGAGACCATTCGCGAGGCCCGCAGCAG CTCCTGA
Upstream 100 bases:
>100_bases CCCGACGGACGAGCATTGTAAAACGCGGCGACGGATGCAAGCGGGATGCCCTCGATGGGGCGGCTCGGGTATCCTTGGCG CGCGCTGGAAGGTGAGGTGG
Downstream 100 bases:
>100_bases CTGCTACCTTCCTGGTAGGGGTGCTGAGGCTTCCCCGCGCGGTCCGCGGGCCGCCGGGCGCTGTCGTTAGGAGGGACCAT GCAGGCACGGTTTGCGGAAC
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: Mucoidy activation protein mucZ [H]
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MQQPYRIVRRWSGRILATLGGWLIAGWSGAVAGLAVGTLIDLWVRLTQVVGLVWSGCGLARTQRLFLGATALTMGHLAKS DGRVSEQEIAAARRVLGELPLDERGRRRAITIFNRGKAPDAPLRPVLGLLRLMGRNRPQELARFLEFQLRVALADGTLDK PRERLLRRVWRQVGVSQADLDARLAQLQRGKVRRGVRLTLDHAYRLLGLSRGASSDEVRQAYRRAISQSHPDRLISRGVS QAELEAAGERTRQIRAAYETIREARSSS
Sequences:
>Translated_268_residues MQQPYRIVRRWSGRILATLGGWLIAGWSGAVAGLAVGTLIDLWVRLTQVVGLVWSGCGLARTQRLFLGATALTMGHLAKS DGRVSEQEIAAARRVLGELPLDERGRRRAITIFNRGKAPDAPLRPVLGLLRLMGRNRPQELARFLEFQLRVALADGTLDK PRERLLRRVWRQVGVSQADLDARLAQLQRGKVRRGVRLTLDHAYRLLGLSRGASSDEVRQAYRRAISQSHPDRLISRGVS QAELEAAGERTRQIRAAYETIREARSSS >Mature_268_residues MQQPYRIVRRWSGRILATLGGWLIAGWSGAVAGLAVGTLIDLWVRLTQVVGLVWSGCGLARTQRLFLGATALTMGHLAKS DGRVSEQEIAAARRVLGELPLDERGRRRAITIFNRGKAPDAPLRPVLGLLRLMGRNRPQELARFLEFQLRVALADGTLDK PRERLLRRVWRQVGVSQADLDARLAQLQRGKVRRGVRLTLDHAYRLLGLSRGASSDEVRQAYRRAISQSHPDRLISRGVS QAELEAAGERTRQIRAAYETIREARSSS
Specific function: Regulatory dnaK co-chaperone. Direct interaction between dnaK and djlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the rcsB/rcsC phosphotransfer sig
COG id: COG1076
COG function: function code O; DnaJ-domain-containing proteins 1
Gene ontology:
Cell location: Cell inner membrane; Single-pass type III membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Escherichia coli, GI1786241, Length=280, Percent_Identity=29.2857142857143, Blast_Score=110, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001623 - InterPro: IPR007791 - InterPro: IPR015609 - InterPro: IPR003095 [H]
Pfam domain/function: PF00226 DnaJ; PF05099 TerB [H]
EC number: NA
Molecular weight: Translated: 29907; Mature: 29907
Theoretical pI: Translated: 12.15; Mature: 12.15
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQPYRIVRRWSGRILATLGGWLIAGWSGAVAGLAVGTLIDLWVRLTQVVGLVWSGCGLA CCCHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RTQRLFLGATALTMGHLAKSDGRVSEQEIAAARRVLGELPLDERGRRRAITIFNRGKAPD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC APLRPVLGLLRLMGRNRPQELARFLEFQLRVALADGTLDKPRERLLRRVWRQVGVSQADL CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHH DARLAQLQRGKVRRGVRLTLDHAYRLLGLSRGASSDEVRQAYRRAISQSHPDRLISRGVS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCC QAELEAAGERTRQIRAAYETIREARSSS HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQQPYRIVRRWSGRILATLGGWLIAGWSGAVAGLAVGTLIDLWVRLTQVVGLVWSGCGLA CCCHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RTQRLFLGATALTMGHLAKSDGRVSEQEIAAARRVLGELPLDERGRRRAITIFNRGKAPD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC APLRPVLGLLRLMGRNRPQELARFLEFQLRVALADGTLDKPRERLLRRVWRQVGVSQADL CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHH DARLAQLQRGKVRRGVRLTLDHAYRLLGLSRGASSDEVRQAYRRAISQSHPDRLISRGVS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCC QAELEAAGERTRQIRAAYETIREARSSS HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7635811; 12704232 [H]