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The map label for this gene is secY

Identifier: 121997629

GI number: 121997629

Start: 917231

End: 918535

Strand: Reverse

Name: secY

Synonym: Hhal_0838

Alternate gene names: 121997629

Gene position: 918535-917231 (Counterclockwise)

Preceding gene: 121997630

Following gene: 121997628

Centisome position: 34.29

GC content: 65.36

Gene sequence:

>1305_bases
ATGGGACGTCTCACCGAGGTTCGCCAGCGTCTGCTCTTCGTACTGCTCGCGCTGATCATCTATCGGATCGGTACCCACAT
CACCATCCCGGGTATCGACCCCGCTGCGCTCGAGCAGATGGTCGACCAGCAACGCGGCACCATCCTGGAGATGTTCAACA
TGTTCGCCGGCGGGGCGCTGGAGCGGCTGTCCATCTTCGCCCTCGGCGTCATGCCCTACATCTCGGCGGCGATCATCATG
CAGCTGCTTACGGCGGTGGTGCCGTCGCTCGAGCGGCTCAAGAAGGAGGGCGAGGCCGGCCGGCGCAAGATCACGCAGTA
CACGCGTTACGGCACCCTCGGCCTGGCCACCTTCCAGGGTATCGGCATCAGCATCGCGTTGCAGGGGCAGGGCGTGGCCG
CCATGCCCGGGCCGGCGTTCGTGTTCATCTCCACGGTGACGCTGGCCACCGGCGTGATCTTCCTGATGTGGCTCGGTGAG
CAGATCACCGAGCGAGGCATCGGCAACGGCATCTCGATCATTATCTTCGCCGGCATCGTCGCCGGGCTGCCGGGCGCCCT
CGGCGGCACGCTGGAGCTGCAGCGTACCGGTGAGCTGGGCACCGCGACGATCCTGCTGCTGCTCATGATGGCCGCGGCGG
TCACCGCCTTCATCGTCTTCGTCGAGCGGGGACAGCGGCGGATCACCGTGCAGTACGCCAAGCGCCAGCAGGGGCGCAAG
ATGTATGCGGCGCAGCAGAGCCACCTGCCGCTGAAGCTCAACATGGCCGGCGTGATCCCGCCGATCTTCGCCTCCAGCAT
CATCCTCTTCCCGGCGACGGTCGGGCAGTGGTTCGGCGATGCCGAGGGGCTGGGCTTCATCGGCGACATCGCCGCGACGC
TGTCGCCGGGCCAGCCGGTCTACGTGGCCCTGTATGCCGCGGCGATCATCTTCTTCTGCTTCTTCTACACGGCGCTGGTG
TTCAACTCGCGGGACACCGCCGACAACCTGAAGAAGTCCGGGGCGTTCATCCCGGGGATCCGTCCCGGTGAGCAGACGTC
CCGCTACATCGATCAGGTGCAGAGCCGGCTGACGTTCGTCGGCGCGCTGTACATCACGGCCGTCTGTCTGATGCCGGAGT
TCCTGATCCTGTACTGGAACGTGCCGTTCTACTTCGGCGGCACCTCGCTGTTGATCAGCGTCATTGTGGTCATGGACTTC
ATGGCGCAGCTGCAGTCGCACTTGGTCTCGCACCAGTACGAGCCGCTGATGAAGAAGGCCAATCTCAAGGGGCACACCCG
GCCTGGCGGCGGGATGCTGCGCTGA

Upstream 100 bases:

>100_bases
ACCCAGGGCGCCCGCAAGGCGATCGAGGCGGCCGGCGGCCAAGTCGTCGAGGAGGGTTAAGTTGGGACGTCCAGGTGGTG
CTGCAGGAGCCCTCGGTGGG

Downstream 100 bases:

>100_bases
ATCGATAAAACTGGCTGCGGGGTGGCACCCAGGCGCGTGGACTGGTATCCTTTCGCGCCTTTGGGTCGCCCGTGAGCGGC
CGCGCTCGGATTATTGGAGA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MGRLTEVRQRLLFVLLALIIYRIGTHITIPGIDPAALEQMVDQQRGTILEMFNMFAGGALERLSIFALGVMPYISAAIIM
QLLTAVVPSLERLKKEGEAGRRKITQYTRYGTLGLATFQGIGISIALQGQGVAAMPGPAFVFISTVTLATGVIFLMWLGE
QITERGIGNGISIIIFAGIVAGLPGALGGTLELQRTGELGTATILLLLMMAAAVTAFIVFVERGQRRITVQYAKRQQGRK
MYAAQQSHLPLKLNMAGVIPPIFASSIILFPATVGQWFGDAEGLGFIGDIAATLSPGQPVYVALYAAAIIFFCFFYTALV
FNSRDTADNLKKSGAFIPGIRPGEQTSRYIDQVQSRLTFVGALYITAVCLMPEFLILYWNVPFYFGGTSLLISVIVVMDF
MAQLQSHLVSHQYEPLMKKANLKGHTRPGGGMLR

Sequences:

>Translated_434_residues
MGRLTEVRQRLLFVLLALIIYRIGTHITIPGIDPAALEQMVDQQRGTILEMFNMFAGGALERLSIFALGVMPYISAAIIM
QLLTAVVPSLERLKKEGEAGRRKITQYTRYGTLGLATFQGIGISIALQGQGVAAMPGPAFVFISTVTLATGVIFLMWLGE
QITERGIGNGISIIIFAGIVAGLPGALGGTLELQRTGELGTATILLLLMMAAAVTAFIVFVERGQRRITVQYAKRQQGRK
MYAAQQSHLPLKLNMAGVIPPIFASSIILFPATVGQWFGDAEGLGFIGDIAATLSPGQPVYVALYAAAIIFFCFFYTALV
FNSRDTADNLKKSGAFIPGIRPGEQTSRYIDQVQSRLTFVGALYITAVCLMPEFLILYWNVPFYFGGTSLLISVIVVMDF
MAQLQSHLVSHQYEPLMKKANLKGHTRPGGGMLR
>Mature_433_residues
GRLTEVRQRLLFVLLALIIYRIGTHITIPGIDPAALEQMVDQQRGTILEMFNMFAGGALERLSIFALGVMPYISAAIIMQ
LLTAVVPSLERLKKEGEAGRRKITQYTRYGTLGLATFQGIGISIALQGQGVAAMPGPAFVFISTVTLATGVIFLMWLGEQ
ITERGIGNGISIIIFAGIVAGLPGALGGTLELQRTGELGTATILLLLMMAAAVTAFIVFVERGQRRITVQYAKRQQGRKM
YAAQQSHLPLKLNMAGVIPPIFASSIILFPATVGQWFGDAEGLGFIGDIAATLSPGQPVYVALYAAAIIFFCFFYTALVF
NSRDTADNLKKSGAFIPGIRPGEQTSRYIDQVQSRLTFVGALYITAVCLMPEFLILYWNVPFYFGGTSLLISVIVVMDFM
AQLQSHLVSHQYEPLMKKANLKGHTRPGGGMLR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=430, Percent_Identity=67.4418604651163, Blast_Score=540, Evalue=1e-154,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47154; Mature: 47022

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLTEVRQRLLFVLLALIIYRIGTHITIPGIDPAALEQMVDQQRGTILEMFNMFAGGAL
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCHH
ERLSIFALGVMPYISAAIIMQLLTAVVPSLERLKKEGEAGRRKITQYTRYGTLGLATFQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHCC
IGISIALQGQGVAAMPGPAFVFISTVTLATGVIFLMWLGEQITERGIGNGISIIIFAGIV
CCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AGLPGALGGTLELQRTGELGTATILLLLMMAAAVTAFIVFVERGQRRITVQYAKRQQGRK
HCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHH
MYAAQQSHLPLKLNMAGVIPPIFASSIILFPATVGQWFGDAEGLGFIGDIAATLSPGQPV
HHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCH
YVALYAAAIIFFCFFYTALVFNSRDTADNLKKSGAFIPGIRPGEQTSRYIDQVQSRLTFV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GALYITAVCLMPEFLILYWNVPFYFGGTSLLISVIVVMDFMAQLQSHLVSHQYEPLMKKA
HHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NLKGHTRPGGGMLR
CCCCCCCCCCCCCC
>Mature Secondary Structure 
GRLTEVRQRLLFVLLALIIYRIGTHITIPGIDPAALEQMVDQQRGTILEMFNMFAGGAL
CCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCHH
ERLSIFALGVMPYISAAIIMQLLTAVVPSLERLKKEGEAGRRKITQYTRYGTLGLATFQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHCC
IGISIALQGQGVAAMPGPAFVFISTVTLATGVIFLMWLGEQITERGIGNGISIIIFAGIV
CCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AGLPGALGGTLELQRTGELGTATILLLLMMAAAVTAFIVFVERGQRRITVQYAKRQQGRK
HCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHH
MYAAQQSHLPLKLNMAGVIPPIFASSIILFPATVGQWFGDAEGLGFIGDIAATLSPGQPV
HHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCH
YVALYAAAIIFFCFFYTALVFNSRDTADNLKKSGAFIPGIRPGEQTSRYIDQVQSRLTFV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GALYITAVCLMPEFLILYWNVPFYFGGTSLLISVIVVMDFMAQLQSHLVSHQYEPLMKKA
HHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NLKGHTRPGGGMLR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]