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The map label for this gene is yefM [C]

Identifier: 121997585

GI number: 121997585

Start: 876172

End: 876423

Strand: Reverse

Name: yefM [C]

Synonym: Hhal_0794

Alternate gene names: 121997585

Gene position: 876423-876172 (Counterclockwise)

Preceding gene: 121997586

Following gene: 121997584

Centisome position: 32.72

GC content: 59.92

Gene sequence:

>252_bases
ATGGACGCGATCAGCTACACAGCAGCACGCCGCCAGCTCGCGAGTACCATGGACAAAGTCTGCGAGGACCACGCACCGAT
TATCATCACCCGGAACAAGGCGCAGTCCGTGGTCATGATCTCCCTTGAGGACTACGAGGCGCTGCAAGAGACTGCTTACC
TGCTCCGCTCCCCGAAGAATGCTCGGCGTCTGCTGGAGTCCGTCGCCGATTTGGAACGGGGTGGTGGCCAGGAGAGGGAC
CTTATGGAATGA

Upstream 100 bases:

>100_bases
GGTGCTTACTGGCCAACGCCTGGGGGGTATCGGCAAAGTTGCCAGATTCGGTTATGTACGACAAAATGTACATGTGGAGT
CTATTGTACAGGAGCCGCCC

Downstream 100 bases:

>100_bases
GGCTGATCTTCTCCGAGAACGCCTGGGAAGACTACCTCTATTGGCAAAAGAACGATAAGGCGACCCTGCGGCGGATCAAC
AAGCTGATCCGGGAGACCCA

Product: prevent-host-death family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MDAISYTAARRQLASTMDKVCEDHAPIIITRNKAQSVVMISLEDYEALQETAYLLRSPKNARRLLESVADLERGGGQERD
LME

Sequences:

>Translated_83_residues
MDAISYTAARRQLASTMDKVCEDHAPIIITRNKAQSVVMISLEDYEALQETAYLLRSPKNARRLLESVADLERGGGQERD
LME
>Mature_83_residues
MDAISYTAARRQLASTMDKVCEDHAPIIITRNKAQSVVMISLEDYEALQETAYLLRSPKNARRLLESVADLERGGGQERD
LME

Specific function: Unknown

COG id: COG2161

COG function: function code D; Antitoxin of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phd/yefM family [H]

Homologues:

Organism=Escherichia coli, GI87082026, Length=83, Percent_Identity=55.421686746988, Blast_Score=101, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006442 [H]

Pfam domain/function: PF02604 PhdYeFM [H]

EC number: NA

Molecular weight: Translated: 9355; Mature: 9355

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAISYTAARRQLASTMDKVCEDHAPIIITRNKAQSVVMISLEDYEALQETAYLLRSPKN
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHCCHH
ARRLLESVADLERGGGQERDLME
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDAISYTAARRQLASTMDKVCEDHAPIIITRNKAQSVVMISLEDYEALQETAYLLRSPKN
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHCCHH
ARRLLESVADLERGGGQERDLME
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]