| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997452
Identifier: 121997452
GI number: 121997452
Start: 737302
End: 738183
Strand: Reverse
Name: 121997452
Synonym: Hhal_0655
Alternate gene names: NA
Gene position: 738183-737302 (Counterclockwise)
Preceding gene: 121997453
Following gene: 121997451
Centisome position: 27.56
GC content: 72.45
Gene sequence:
>882_bases GTGAAGGCGTTCGCCGCCTTCATCCTGCGCGGGCCGTTCCAGGCCGCGACGGTCATGGTGGCGGCGGCCCTGCTGCCGCT GCTCTCCGTGCTGGCCGCCGGCGCCCTGGCGCTGGTGACCCTGCGCGACGGGCTTCGGCAGGGCGTGGTGGTCGGCGCCA TGGCGGGGGCGGCGCTGTTCGCCCTGATGTTCGCGGCGCTGGGCACCGGTGAGCCGGCGTTGCGGCTCATCCTCGAGCAG TGGGTGCCGGTGCTTCTGCTGGCCGAGGTGCTGCGCCGCAGTGTCTCGCTGCCGTTGACGCTGCTGCTGTGGATGGCCCT GGGCGCAGCGACAGTGGTGGGGTTCCACCTGGTGGTGCCCGATCCGGCGGCCTACTGGCAGTCGGTGGTCGAGGCCTTCC TGGCCGTGACCGGGGCCGAGGGCGAACTCGGCGCCGAGGGCGGCACGCTCCTGCAGGAGGAGCTGCTGCCGGTGATGACC GGGCTGTGGGCGATGAACCTGATGCTCGTCGTCCTCGCCGGGCTGCTGATCGGCCGGGGGCTGCAGGCGCTGATGTACAA TCCGGGCGGTCTGCGCGCGGAGTTTCACAGCCTGGACCTGGGGCGCGAGGCGGCGCTGGTCGCCCTGGTGCTCTGGCTCG GTGGGCTGTTCGCCGGTCCGGGCCTGATCACCGATCTGGCGCTGGTGACCGGCGTGGCCTTCGTGGTCCAGGCCATCGCC TTTAGCCACGCCATGGTCGCGGCGCGGGGGCTGAGCGTTGGCTGGCTGGTGCCGGTGTACCTGCTGGCACCGCTGCTGTT CCGCCCCCTGGCGCTGGTGGGCATCGGCGATGCGCTGTTTCAGTGGCGGCGACGACTTGGCGGCGGGGCGTCCTCGCAGT AG
Upstream 100 bases:
>100_bases CGGCACGAGTGCGCGCTACCAGCGGCAGCTGGCGCGGGCGATCAAGCGCGCCCGCTACCTGGCGCTCCTGCCGTACACGG ACCGCCACTAAGTCGGGGCC
Downstream 100 bases:
>100_bases CGCCGCCGCAACCGTATACGAAAGATCGAGGTGCAAGGCATGGAACTGATTCTGTTGGAAAAGGTGTCGAACCTGGGGAA CCTGGGTGATCGCGTCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKAFAAFILRGPFQAATVMVAAALLPLLSVLAAGALALVTLRDGLRQGVVVGAMAGAALFALMFAALGTGEPALRLILEQ WVPVLLLAEVLRRSVSLPLTLLLWMALGAATVVGFHLVVPDPAAYWQSVVEAFLAVTGAEGELGAEGGTLLQEELLPVMT GLWAMNLMLVVLAGLLIGRGLQALMYNPGGLRAEFHSLDLGREAALVALVLWLGGLFAGPGLITDLALVTGVAFVVQAIA FSHAMVAARGLSVGWLVPVYLLAPLLFRPLALVGIGDALFQWRRRLGGGASSQ
Sequences:
>Translated_293_residues MKAFAAFILRGPFQAATVMVAAALLPLLSVLAAGALALVTLRDGLRQGVVVGAMAGAALFALMFAALGTGEPALRLILEQ WVPVLLLAEVLRRSVSLPLTLLLWMALGAATVVGFHLVVPDPAAYWQSVVEAFLAVTGAEGELGAEGGTLLQEELLPVMT GLWAMNLMLVVLAGLLIGRGLQALMYNPGGLRAEFHSLDLGREAALVALVLWLGGLFAGPGLITDLALVTGVAFVVQAIA FSHAMVAARGLSVGWLVPVYLLAPLLFRPLALVGIGDALFQWRRRLGGGASSQ >Mature_293_residues MKAFAAFILRGPFQAATVMVAAALLPLLSVLAAGALALVTLRDGLRQGVVVGAMAGAALFALMFAALGTGEPALRLILEQ WVPVLLLAEVLRRSVSLPLTLLLWMALGAATVVGFHLVVPDPAAYWQSVVEAFLAVTGAEGELGAEGGTLLQEELLPVMT GLWAMNLMLVVLAGLLIGRGLQALMYNPGGLRAEFHSLDLGREAALVALVLWLGGLFAGPGLITDLALVTGVAFVVQAIA FSHAMVAARGLSVGWLVPVYLLAPLLFRPLALVGIGDALFQWRRRLGGGASSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30487; Mature: 30487
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFAAFILRGPFQAATVMVAAALLPLLSVLAAGALALVTLRDGLRQGVVVGAMAGAALF CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMFAALGTGEPALRLILEQWVPVLLLAEVLRRSVSLPLTLLLWMALGAATVVGFHLVVP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECC DPAAYWQSVVEAFLAVTGAEGELGAEGGTLLQEELLPVMTGLWAMNLMLVVLAGLLIGRG CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LQALMYNPGGLRAEFHSLDLGREAALVALVLWLGGLFAGPGLITDLALVTGVAFVVQAIA HHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FSHAMVAARGLSVGWLVPVYLLAPLLFRPLALVGIGDALFQWRRRLGGGASSQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKAFAAFILRGPFQAATVMVAAALLPLLSVLAAGALALVTLRDGLRQGVVVGAMAGAALF CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMFAALGTGEPALRLILEQWVPVLLLAEVLRRSVSLPLTLLLWMALGAATVVGFHLVVP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECC DPAAYWQSVVEAFLAVTGAEGELGAEGGTLLQEELLPVMTGLWAMNLMLVVLAGLLIGRG CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LQALMYNPGGLRAEFHSLDLGREAALVALVLWLGGLFAGPGLITDLALVTGVAFVVQAIA HHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FSHAMVAARGLSVGWLVPVYLLAPLLFRPLALVGIGDALFQWRRRLGGGASSQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA