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The map label for this gene is yaaJ [C]

Identifier: 121997408

GI number: 121997408

Start: 686230

End: 687600

Strand: Reverse

Name: yaaJ [C]

Synonym: Hhal_0607

Alternate gene names: 121997408

Gene position: 687600-686230 (Counterclockwise)

Preceding gene: 121997409

Following gene: 121997405

Centisome position: 25.67

GC content: 67.83

Gene sequence:

>1371_bases
ATGGAGGCGGTGACCGCGTTTCTCGAGGCGGTTAGCGGTGTTGTCTGGGGGCCGGCGATGCTGGTGCTGCTGCTCGGCAC
CGGTCTTTATCTTTCCATCGGCCTCCGGGCCATGCCGATTCGACGGATTGGCTACGGGTTCCGCCGCATGTGGGGAGGGC
GCGCCGAACGCCCCGATGAGCCCGGCGAGATCACGCCGTTTCAGGCACTGACCACCGCGCTCTCGGCGACCATCGGCACG
GGCAACATTGCTGGTGTAGCCACGGCGATCACCCTGGGTGGCCCCGGCGCGGTGTTCTGGATGTGGATCACCGCGCTGGT
GGGCATGGCCACCAAGTATGCCGAGGCCGTGCTGGCGGTGAAGTACCGTGAGACCGACGAGCACGGTCGCTACGTCGGTG
GCCCGATGTACTACATCAAGAACGGCCTGGGCCCGCGCTGGGCATGGCTGGGGACGCTGTTCGCGGTCTTCGCCATGGTC
GCCGCGTTCGGCATCGGCAACACGGTGCAGGCCAACTCGGTGGCCGATGTGGTCGAGTCCAACCTCATGGTGCCGCCCTG
GCTCACCGGGCTGATCCTGGCCGGGCTGGTCTTCCTGGTGATCATCGGTGGCATCCGGCGCATCGCCCGGGTGGCCGAGC
GCCTGGTCCCGACCATGGCGGCCATCTACGTCATCGGCGGTCTGCTGATCATCGGCTGGAACTTCACCGATGTCCCGGCG
GCGCTCGGCCAGATCGTGACCGACGCCTTTACCGGTACGGCGGCCACCGGCGGGTTCGCCGGCGCCGCGGTGTGGGCAGC
GATCCGCTTCGGTGTCGCCCGCGGCATCTTCTCCAACGAGGCCGGTCTCGGCTCGGCACCGATCGCCCACGCCGCGGCGC
GGACCAAGAACCCGGTCCGTCAGGGCACGGTGGCGATGCTCGGCACCTTCATCGACACCATCATCGTCTGCACCATCACT
GCGCTAGCCATCGTCCTGACCGGGGTGTGGACCAGCGGCGAGACCGGCGCGTCGCTGACCTCCATGGCCTTCGGCGAGGG
CATCCCCGGCGGCAACTGGATCGTCACGGTGGGCATGATCCTGTTCGCGTTCACCACCATCGTCGCTTGGAGCTACTACG
GCGAGCGCTGCGCTGCGTTCCTCTTCGGGGCGCGGGTGATCCTGCCCTACCGCTACCTGTGGGTGGCGCTCCTGCTGGTC
GGTGCCGTGGCCGAACTCGGCGTGGTGTGGATCGTGGCCGATATCCTCAACGCGCTGATGGCGATCCCCAACCTGATCGC
GCTGCTGGCGCTGTCGGGGACGGTCTTTGCCATTACCCGGTCGTATTTCGCCCCGGGTGGCGGCTCTGAGGAACCGCAGC
GGTCGGAGTGA

Upstream 100 bases:

>100_bases
ATGTGGCGGAGATCGCGCAACGTTTGCACGGCTGACGGGGGCGTCTGTCTTTATCCACCAGCGCGGCGGATAGGCCGCGT
GACCAGCGGGAGGGCGAGCC

Downstream 100 bases:

>100_bases
TCGCCGCCGGAGCGGGTGGGGGCGCCGTCGGCTACGCCGGGGTGCCCCCACTCGGTTCGGCCGTCGCGCTCCGCTCTACT
GCATGACCAGCCGTGTGAAG

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MEAVTAFLEAVSGVVWGPAMLVLLLGTGLYLSIGLRAMPIRRIGYGFRRMWGGRAERPDEPGEITPFQALTTALSATIGT
GNIAGVATAITLGGPGAVFWMWITALVGMATKYAEAVLAVKYRETDEHGRYVGGPMYYIKNGLGPRWAWLGTLFAVFAMV
AAFGIGNTVQANSVADVVESNLMVPPWLTGLILAGLVFLVIIGGIRRIARVAERLVPTMAAIYVIGGLLIIGWNFTDVPA
ALGQIVTDAFTGTAATGGFAGAAVWAAIRFGVARGIFSNEAGLGSAPIAHAAARTKNPVRQGTVAMLGTFIDTIIVCTIT
ALAIVLTGVWTSGETGASLTSMAFGEGIPGGNWIVTVGMILFAFTTIVAWSYYGERCAAFLFGARVILPYRYLWVALLLV
GAVAELGVVWIVADILNALMAIPNLIALLALSGTVFAITRSYFAPGGGSEEPQRSE

Sequences:

>Translated_456_residues
MEAVTAFLEAVSGVVWGPAMLVLLLGTGLYLSIGLRAMPIRRIGYGFRRMWGGRAERPDEPGEITPFQALTTALSATIGT
GNIAGVATAITLGGPGAVFWMWITALVGMATKYAEAVLAVKYRETDEHGRYVGGPMYYIKNGLGPRWAWLGTLFAVFAMV
AAFGIGNTVQANSVADVVESNLMVPPWLTGLILAGLVFLVIIGGIRRIARVAERLVPTMAAIYVIGGLLIIGWNFTDVPA
ALGQIVTDAFTGTAATGGFAGAAVWAAIRFGVARGIFSNEAGLGSAPIAHAAARTKNPVRQGTVAMLGTFIDTIIVCTIT
ALAIVLTGVWTSGETGASLTSMAFGEGIPGGNWIVTVGMILFAFTTIVAWSYYGERCAAFLFGARVILPYRYLWVALLLV
GAVAELGVVWIVADILNALMAIPNLIALLALSGTVFAITRSYFAPGGGSEEPQRSE
>Mature_456_residues
MEAVTAFLEAVSGVVWGPAMLVLLLGTGLYLSIGLRAMPIRRIGYGFRRMWGGRAERPDEPGEITPFQALTTALSATIGT
GNIAGVATAITLGGPGAVFWMWITALVGMATKYAEAVLAVKYRETDEHGRYVGGPMYYIKNGLGPRWAWLGTLFAVFAMV
AAFGIGNTVQANSVADVVESNLMVPPWLTGLILAGLVFLVIIGGIRRIARVAERLVPTMAAIYVIGGLLIIGWNFTDVPA
ALGQIVTDAFTGTAATGGFAGAAVWAAIRFGVARGIFSNEAGLGSAPIAHAAARTKNPVRQGTVAMLGTFIDTIIVCTIT
ALAIVLTGVWTSGETGASLTSMAFGEGIPGGNWIVTVGMILFAFTTIVAWSYYGERCAAFLFGARVILPYRYLWVALLLV
GAVAELGVVWIVADILNALMAIPNLIALLALSGTVFAITRSYFAPGGGSEEPQRSE

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=445, Percent_Identity=40, Blast_Score=262, Evalue=3e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47860; Mature: 47860

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAVTAFLEAVSGVVWGPAMLVLLLGTGLYLSIGLRAMPIRRIGYGFRRMWGGRAERPDE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHCHHHHHHHHHHHHCCCCCCCCCC
PGEITPFQALTTALSATIGTGNIAGVATAITLGGPGAVFWMWITALVGMATKYAEAVLAV
CCCCCHHHHHHHHHHHHCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KYRETDEHGRYVGGPMYYIKNGLGPRWAWLGTLFAVFAMVAAFGIGNTVQANSVADVVES
HCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
NLMVPPWLTGLILAGLVFLVIIGGIRRIARVAERLVPTMAAIYVIGGLLIIGWNFTDVPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ALGQIVTDAFTGTAATGGFAGAAVWAAIRFGVARGIFSNEAGLGSAPIAHAAARTKNPVR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHH
QGTVAMLGTFIDTIIVCTITALAIVLTGVWTSGETGASLTSMAFGEGIPGGNWIVTVGMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHH
LFAFTTIVAWSYYGERCAAFLFGARVILPYRYLWVALLLVGAVAELGVVWIVADILNALM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPNLIALLALSGTVFAITRSYFAPGGGSEEPQRSE
HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEAVTAFLEAVSGVVWGPAMLVLLLGTGLYLSIGLRAMPIRRIGYGFRRMWGGRAERPDE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHCHHHHHHHHHHHHCCCCCCCCCC
PGEITPFQALTTALSATIGTGNIAGVATAITLGGPGAVFWMWITALVGMATKYAEAVLAV
CCCCCHHHHHHHHHHHHCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KYRETDEHGRYVGGPMYYIKNGLGPRWAWLGTLFAVFAMVAAFGIGNTVQANSVADVVES
HCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
NLMVPPWLTGLILAGLVFLVIIGGIRRIARVAERLVPTMAAIYVIGGLLIIGWNFTDVPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ALGQIVTDAFTGTAATGGFAGAAVWAAIRFGVARGIFSNEAGLGSAPIAHAAARTKNPVR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHH
QGTVAMLGTFIDTIIVCTITALAIVLTGVWTSGETGASLTSMAFGEGIPGGNWIVTVGMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHH
LFAFTTIVAWSYYGERCAAFLFGARVILPYRYLWVALLLVGAVAELGVVWIVADILNALM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPNLIALLALSGTVFAITRSYFAPGGGSEEPQRSE
HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]