| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121639638
Identifier: 121639638
GI number: 121639638
Start: 4140389
End: 4141696
Strand: Reverse
Name: 121639638
Synonym: BCG_3782c
Alternate gene names: NA
Gene position: 4141696-4140389 (Counterclockwise)
Preceding gene: 121639646
Following gene: 121639637
Centisome position: 94.68
GC content: 63.07
Gene sequence:
>1308_bases GTGTCGTTCGACTCTCTTAGCCCCCAAGAGCTAGCGGCACTACACGCACGCCATCAGCAGGATTATGCGGCGCTTCAGGG CATGAAGCTGGCTCTGGATCTCACCCGCGGCAAACCATCCGCAGAGCAGCTCGACCTGTCGAACCAGCTGCTGAGCTTGC CCGGAGACGACTACCGCGACCCGGAGGGCACCGACACCCGCAACTATGGTGGCCAGCACGGCCTGCCGGGCCTGCGGGCT ATCTTCGCCGAACTGCTCGGCATCGCAGTGCCCAACCTGATCGCGGGCAACAACTCCAGCCTGGAATTGATGCACGACAT CGTCGCCTTCTCCATGTTGTATGGCGGCGTGGACTCGCCGCGGCCTTGGATTCAGGAGCAGGACGGCATCAAATTCCTGT GCCCGGTCCCCGGCTATGACCGGCACTTTGCCATCACCGAGACCATGGGCATCGAGATGATCCCGATACCCATGCTGCAG GATGGGCCCGACGTCGATCTGATCGAAGAACTGGTTGCCGTCGACCCAGCCATCAAGGGGATGTGGACGGTACCGGTCTT CGGCAACCCTTCGGGCGTCACCTATTCCTGGGAAACGGTTCGCCGACTCGTCCAGATGCGGACGGCGGCACCTGACTTCC GCTTGTTCTGGGACAACGCGTATGCGGTGCATACCCTGACGCTGGATTTCCCGCGCCAGGTCGACGTGCTCGGGCTGGCC GCCAAGGCCGGCAACCCCAACCGCCCCTACGTCTTCGCGTCCACCTCGAAGATCACCTTCGCCGGCGGCGGTGTCAGCTT CTTCGGTGGATCGTTAGGCAACATCGCCTGGTATCTGCAGTACGCCGGGAAGAAGTCGATCGGCCCGGACAAGGTCAACC AGCTGCGGCATCTACGCTTCTTCGGCGACGCCGATGGGGTACGTCTACACATGTTGCGTTACCAGCAGATACTGGCGCCG AAATTCGCGTTGGTGGCCGAAGTTCTGGATCAGCGGCTAAGCGAGTCCAAGATCGCCTCCTGGACCGAGCCCAAGGGTGG CTACTTCATCAGCCTCGACGTGTTGCCCGGGACCGCGCGCCGGACCGTAGCCTTGGCTAAGGACGTTGGTATCGCGGTGA CCGAGGCGGGGGCGTCGTTCCCGTATCGAAAGGATCCGGACGACAAGAACATCCGGATCGCGCCGTCGTTTCCGTCGGTA CCGGACCTGCGCAACGCGGTTGACGGGTTGGCGACCTGCGCGCTGCTGGCGGCGACCGAGACATTGCTTAACCAGGGACT AGCCTCCTCGGCGCCGAACGTGCGCTGA
Upstream 100 bases:
>100_bases GGGTCAACGGGCTCTGTCGGGTGCGCGGGGTCCCCTTCAGCCGGGGCACTGACTGGACCTCGGTATACCCACGGTTTTCG ACTCGGCGAAAGGGCCCACG
Downstream 100 bases:
>100_bases GAGCGGGAACCCGCGCGCCGAAATCACGCCGAACGTTCACATTCGACGCTGCGAACACACTCGTCGCCTAGGGTCGGTAG CCTGCTGACGTGGCTCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSFDSLSPQELAALHARHQQDYAALQGMKLALDLTRGKPSAEQLDLSNQLLSLPGDDYRDPEGTDTRNYGGQHGLPGLRA IFAELLGIAVPNLIAGNNSSLELMHDIVAFSMLYGGVDSPRPWIQEQDGIKFLCPVPGYDRHFAITETMGIEMIPIPMLQ DGPDVDLIEELVAVDPAIKGMWTVPVFGNPSGVTYSWETVRRLVQMRTAAPDFRLFWDNAYAVHTLTLDFPRQVDVLGLA AKAGNPNRPYVFASTSKITFAGGGVSFFGGSLGNIAWYLQYAGKKSIGPDKVNQLRHLRFFGDADGVRLHMLRYQQILAP KFALVAEVLDQRLSESKIASWTEPKGGYFISLDVLPGTARRTVALAKDVGIAVTEAGASFPYRKDPDDKNIRIAPSFPSV PDLRNAVDGLATCALLAATETLLNQGLASSAPNVR
Sequences:
>Translated_435_residues MSFDSLSPQELAALHARHQQDYAALQGMKLALDLTRGKPSAEQLDLSNQLLSLPGDDYRDPEGTDTRNYGGQHGLPGLRA IFAELLGIAVPNLIAGNNSSLELMHDIVAFSMLYGGVDSPRPWIQEQDGIKFLCPVPGYDRHFAITETMGIEMIPIPMLQ DGPDVDLIEELVAVDPAIKGMWTVPVFGNPSGVTYSWETVRRLVQMRTAAPDFRLFWDNAYAVHTLTLDFPRQVDVLGLA AKAGNPNRPYVFASTSKITFAGGGVSFFGGSLGNIAWYLQYAGKKSIGPDKVNQLRHLRFFGDADGVRLHMLRYQQILAP KFALVAEVLDQRLSESKIASWTEPKGGYFISLDVLPGTARRTVALAKDVGIAVTEAGASFPYRKDPDDKNIRIAPSFPSV PDLRNAVDGLATCALLAATETLLNQGLASSAPNVR >Mature_434_residues SFDSLSPQELAALHARHQQDYAALQGMKLALDLTRGKPSAEQLDLSNQLLSLPGDDYRDPEGTDTRNYGGQHGLPGLRAI FAELLGIAVPNLIAGNNSSLELMHDIVAFSMLYGGVDSPRPWIQEQDGIKFLCPVPGYDRHFAITETMGIEMIPIPMLQD GPDVDLIEELVAVDPAIKGMWTVPVFGNPSGVTYSWETVRRLVQMRTAAPDFRLFWDNAYAVHTLTLDFPRQVDVLGLAA KAGNPNRPYVFASTSKITFAGGGVSFFGGSLGNIAWYLQYAGKKSIGPDKVNQLRHLRFFGDADGVRLHMLRYQQILAPK FALVAEVLDQRLSESKIASWTEPKGGYFISLDVLPGTARRTVALAKDVGIAVTEAGASFPYRKDPDDKNIRIAPSFPSVP DLRNAVDGLATCALLAATETLLNQGLASSAPNVR
Specific function: Unknown
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: NA
Molecular weight: Translated: 47368; Mature: 47236
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDSLSPQELAALHARHQQDYAALQGMKLALDLTRGKPSAEQLDLSNQLLSLPGDDYRD CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCHHHHHCCCCCCCCCC PEGTDTRNYGGQHGLPGLRAIFAELLGIAVPNLIAGNNSSLELMHDIVAFSMLYGGVDSP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCC RPWIQEQDGIKFLCPVPGYDRHFAITETMGIEMIPIPMLQDGPDVDLIEELVAVDPAIKG CCCCCCCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCC MWTVPVFGNPSGVTYSWETVRRLVQMRTAAPDFRLFWDNAYAVHTLTLDFPRQVDVLGLA EEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCEEEEE AKAGNPNRPYVFASTSKITFAGGGVSFFGGSLGNIAWYLQYAGKKSIGPDKVNQLRHLRF ECCCCCCCCEEEEECCEEEEECCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHEE FGDADGVRLHMLRYQQILAPKFALVAEVLDQRLSESKIASWTEPKGGYFISLDVLPGTAR ECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCH RTVALAKDVGIAVTEAGASFPYRKDPDDKNIRIAPSFPSVPDLRNAVDGLATCALLAATE HHEEEHHCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH TLLNQGLASSAPNVR HHHHCCHHCCCCCCC >Mature Secondary Structure SFDSLSPQELAALHARHQQDYAALQGMKLALDLTRGKPSAEQLDLSNQLLSLPGDDYRD CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCHHHHHCCCCCCCCCC PEGTDTRNYGGQHGLPGLRAIFAELLGIAVPNLIAGNNSSLELMHDIVAFSMLYGGVDSP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCC RPWIQEQDGIKFLCPVPGYDRHFAITETMGIEMIPIPMLQDGPDVDLIEELVAVDPAIKG CCCCCCCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCC MWTVPVFGNPSGVTYSWETVRRLVQMRTAAPDFRLFWDNAYAVHTLTLDFPRQVDVLGLA EEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCEEEEE AKAGNPNRPYVFASTSKITFAGGGVSFFGGSLGNIAWYLQYAGKKSIGPDKVNQLRHLRF ECCCCCCCCEEEEECCEEEEECCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHEE FGDADGVRLHMLRYQQILAPKFALVAEVLDQRLSESKIASWTEPKGGYFISLDVLPGTAR ECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCH RTVALAKDVGIAVTEAGASFPYRKDPDDKNIRIAPSFPSVPDLRNAVDGLATCALLAATE HHEEEHHCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH TLLNQGLASSAPNVR HHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA