| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is glpK [H]
Identifier: 121639610
GI number: 121639610
Start: 4111315
End: 4112871
Strand: Reverse
Name: glpK [H]
Synonym: BCG_3755c
Alternate gene names: 121639610
Gene position: 4112871-4111315 (Counterclockwise)
Preceding gene: 121639611
Following gene: 121639608
Centisome position: 94.02
GC content: 64.42
Gene sequence:
>1557_bases GTGTCCGACGCCATCCTAGGAGAGCAATTGGCCGAGTCCTCGGATTTCATAGCCGCCATCGACCAGGGCACCACCAGCAC CCGCTGCATGATCTTCGATCACCACGGTGCCGAGGTGGCCCGCCACCAGCTCGAGCACGAGCAGATCCTGCCCCGGGCCG GCTGGGTGGAGCACAACCCGGTCGAGATCTGGGAGCGCACCGCGTCGGTGTTGATCTCGGTGCTCAACGCCACCAACCTA TCGCCGAAAGATATTGCCGCGTTGGGGATTACCAACCAACGTGAGACGACGCTGGTATGGAATCGGCACACCGGACGGCC CTACTACAACGCGATTGTATGGCAGGATACCCGCACCGACCGCATCGCGTCGGCGCTGGATCGAGACGGTCGTGGAAACC TGATCCGCCGCAAGGCGGGCCTGCCGCCGGCAACTTATTTCTCTGGCGGCAAGCTGCAGTGGATCCTGGAAAATGTCGAT GGAGTCCGCGCGGCCGCCGAGAACGGCGACGCATTGTTCGGCACACCGGACACCTGGGTGTTGTGGAATCTGACCGGCGG GCCGCGGGGGGGGGGTGTGCATGTCACCGATGTAACCAACGCCAGCCGGACCATGTTGATGGATCTAGAGACGCTGGACT GGGACGACGAGCTGTTGTCGTTGTTTTCGATACCTCGGGCCATGCTGCCCGAGATCGCATCGTCGGCGCCGTCGGAGCCT TACGGTGTCACGCTGGCGACCGGGCCTGTCGGCGGTGAGGTGCCGATCACCGGAGTTCTCGGTGATCAGCATGCGGCCAT GGTCGGTCAAGTCTGTCTGGCCCCAGGGGAGGCGAAAAACACCTATGGGACCGGCAATTTTCTGCTGCTGAACACCGGTG AAACGATCGTGCGATCGAATAACGGCCTGCTAACCACGGTGTGCTACCAATTCGGGAACGCTAAACCCGTGTACGCGCTT GAAGGTTCGATCGCGGTGACCGGCTCGGCGGTGCAGTGGCTACGCGATCAGCTGGGCATCATCAGCGGCGCCGCACAGAG TGAGGCGCTGGCCCGCCAGGTCCCCGACAACGGCGGCATGTATTTCGTGCCGGCGTTTTCCGGGCTGTTCGCGCCATACT GGCGGTCCGATGCGCGCGGCGCGATCGTCGGGTTGTCGCGGTTCAACACCAACGCGCACCTGGCGCGCGCAACGCTGGAG GCGATCTGCTACCAGAGCCGCGATGTGGTGGACGCCATGGAAGCAGACTCCGGTGTTCGCCTGCAGGTGTTGAAGGTGGA TGGCGGGATCACCGGCAACGACCTGTGTATGCAGATCCAGGCCGACGTGTTGGGTGTGGATGTGGTGCGGCCGGTGGTCG CCGAGACCACCGCACTAGGTGCGGCCTACGCGGCGGGCTTGGCGGTCGGGTTCTGGGCGGCTCCGTCCGATCTGCGGGCC AACTGGCGAGAGGACAAGCGGTGGACACCGACGTGGGACGACGACGAGCGTGCCGCGGGTTATGCCGGCTGGCGCAAGGC GGTGCAGCGGACCCTGGATTGGGTTGACGTGTCCTAG
Upstream 100 bases:
>100_bases GACTTCCGCAAGTTCGAGGGCATTAGAATTCGCGACCCCTTCTCCGGCTGACGGCGTCGGACCCGCCGCTGCGGTGGACC ATCATGGACGATTACATGCA
Downstream 100 bases:
>100_bases CTTTCGCTGTGCGCCTGAACATGTCCGCACGCTCGGGGGATCCGGCGCAGCGAAGACTAGCTGCTAGCCCGGCGGCGAGA ATCCCGGGCCGTCCGGCGCC
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MSDAILGEQLAESSDFIAAIDQGTTSTRCMIFDHHGAEVARHQLEHEQILPRAGWVEHNPVEIWERTASVLISVLNATNL SPKDIAALGITNQRETTLVWNRHTGRPYYNAIVWQDTRTDRIASALDRDGRGNLIRRKAGLPPATYFSGGKLQWILENVD GVRAAAENGDALFGTPDTWVLWNLTGGPRGGGVHVTDVTNASRTMLMDLETLDWDDELLSLFSIPRAMLPEIASSAPSEP YGVTLATGPVGGEVPITGVLGDQHAAMVGQVCLAPGEAKNTYGTGNFLLLNTGETIVRSNNGLLTTVCYQFGNAKPVYAL EGSIAVTGSAVQWLRDQLGIISGAAQSEALARQVPDNGGMYFVPAFSGLFAPYWRSDARGAIVGLSRFNTNAHLARATLE AICYQSRDVVDAMEADSGVRLQVLKVDGGITGNDLCMQIQADVLGVDVVRPVVAETTALGAAYAAGLAVGFWAAPSDLRA NWREDKRWTPTWDDDERAAGYAGWRKAVQRTLDWVDVS
Sequences:
>Translated_518_residues MSDAILGEQLAESSDFIAAIDQGTTSTRCMIFDHHGAEVARHQLEHEQILPRAGWVEHNPVEIWERTASVLISVLNATNL SPKDIAALGITNQRETTLVWNRHTGRPYYNAIVWQDTRTDRIASALDRDGRGNLIRRKAGLPPATYFSGGKLQWILENVD GVRAAAENGDALFGTPDTWVLWNLTGGPRGGGVHVTDVTNASRTMLMDLETLDWDDELLSLFSIPRAMLPEIASSAPSEP YGVTLATGPVGGEVPITGVLGDQHAAMVGQVCLAPGEAKNTYGTGNFLLLNTGETIVRSNNGLLTTVCYQFGNAKPVYAL EGSIAVTGSAVQWLRDQLGIISGAAQSEALARQVPDNGGMYFVPAFSGLFAPYWRSDARGAIVGLSRFNTNAHLARATLE AICYQSRDVVDAMEADSGVRLQVLKVDGGITGNDLCMQIQADVLGVDVVRPVVAETTALGAAYAAGLAVGFWAAPSDLRA NWREDKRWTPTWDDDERAAGYAGWRKAVQRTLDWVDVS >Mature_517_residues SDAILGEQLAESSDFIAAIDQGTTSTRCMIFDHHGAEVARHQLEHEQILPRAGWVEHNPVEIWERTASVLISVLNATNLS PKDIAALGITNQRETTLVWNRHTGRPYYNAIVWQDTRTDRIASALDRDGRGNLIRRKAGLPPATYFSGGKLQWILENVDG VRAAAENGDALFGTPDTWVLWNLTGGPRGGGVHVTDVTNASRTMLMDLETLDWDDELLSLFSIPRAMLPEIASSAPSEPY GVTLATGPVGGEVPITGVLGDQHAAMVGQVCLAPGEAKNTYGTGNFLLLNTGETIVRSNNGLLTTVCYQFGNAKPVYALE GSIAVTGSAVQWLRDQLGIISGAAQSEALARQVPDNGGMYFVPAFSGLFAPYWRSDARGAIVGLSRFNTNAHLARATLEA ICYQSRDVVDAMEADSGVRLQVLKVDGGITGNDLCMQIQADVLGVDVVRPVVAETTALGAAYAAGLAVGFWAAPSDLRAN WREDKRWTPTWDDDERAAGYAGWRKAVQRTLDWVDVS
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=510, Percent_Identity=48.8235294117647, Blast_Score=480, Evalue=1e-135, Organism=Homo sapiens, GI4504007, Length=510, Percent_Identity=48.8235294117647, Blast_Score=479, Evalue=1e-135, Organism=Homo sapiens, GI42794763, Length=515, Percent_Identity=48.3495145631068, Blast_Score=479, Evalue=1e-135, Organism=Homo sapiens, GI41393575, Length=509, Percent_Identity=47.1512770137525, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI88196792, Length=517, Percent_Identity=30.9477756286267, Blast_Score=283, Evalue=4e-76, Organism=Escherichia coli, GI1790361, Length=503, Percent_Identity=52.0874751491054, Blast_Score=524, Evalue=1e-150, Organism=Escherichia coli, GI1790005, Length=480, Percent_Identity=23.125, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1789987, Length=510, Percent_Identity=24.5098039215686, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787789, Length=552, Percent_Identity=25.5434782608696, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17535599, Length=509, Percent_Identity=45.3831041257367, Blast_Score=424, Evalue=1e-119, Organism=Caenorhabditis elegans, GI71986140, Length=525, Percent_Identity=23.6190476190476, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71986147, Length=300, Percent_Identity=26.3333333333333, Blast_Score=107, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321755, Length=557, Percent_Identity=39.8563734290844, Blast_Score=341, Evalue=2e-94, Organism=Drosophila melanogaster, GI17864214, Length=514, Percent_Identity=48.2490272373541, Blast_Score=456, Evalue=1e-128, Organism=Drosophila melanogaster, GI24654573, Length=440, Percent_Identity=50.4545454545455, Blast_Score=421, Evalue=1e-118, Organism=Drosophila melanogaster, GI24655555, Length=524, Percent_Identity=41.030534351145, Blast_Score=410, Evalue=1e-114, Organism=Drosophila melanogaster, GI24655560, Length=524, Percent_Identity=41.030534351145, Blast_Score=410, Evalue=1e-114, Organism=Drosophila melanogaster, GI24655570, Length=524, Percent_Identity=41.030534351145, Blast_Score=410, Evalue=1e-114, Organism=Drosophila melanogaster, GI24655574, Length=524, Percent_Identity=41.030534351145, Blast_Score=410, Evalue=1e-114, Organism=Drosophila melanogaster, GI24655565, Length=524, Percent_Identity=41.030534351145, Blast_Score=410, Evalue=1e-114, Organism=Drosophila melanogaster, GI19922058, Length=539, Percent_Identity=35.621521335807, Blast_Score=308, Evalue=4e-84, Organism=Drosophila melanogaster, GI24652871, Length=505, Percent_Identity=35.2475247524752, Blast_Score=285, Evalue=6e-77, Organism=Drosophila melanogaster, GI24656367, Length=533, Percent_Identity=30.3939962476548, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI21357867, Length=538, Percent_Identity=29.9256505576208, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24656372, Length=377, Percent_Identity=31.5649867374005, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI45552909, Length=318, Percent_Identity=29.559748427673, Blast_Score=129, Evalue=5e-30,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 55889; Mature: 55758
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAILGEQLAESSDFIAAIDQGTTSTRCMIFDHHGAEVARHQLEHEQILPRAGWVEHNP CCCCHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCH VEIWERTASVLISVLNATNLSPKDIAALGITNQRETTLVWNRHTGRPYYNAIVWQDTRTD HHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCHH RIASALDRDGRGNLIRRKAGLPPATYFSGGKLQWILENVDGVRAAAENGDALFGTPDTWV HHHHHHCCCCCCCEEEECCCCCCCCEECCCEEEEEEECCCCHHHHCCCCCEEECCCCCEE LWNLTGGPRGGGVHVTDVTNASRTMLMDLETLDWDDELLSLFSIPRAMLPEIASSAPSEP EEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCC YGVTLATGPVGGEVPITGVLGDQHAAMVGQVCLAPGEAKNTYGTGNFLLLNTGETIVRSN CEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECC NGLLTTVCYQFGNAKPVYALEGSIAVTGSAVQWLRDQLGIISGAAQSEALARQVPDNGGM CCEEEEEHHHCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCE YFVPAFSGLFAPYWRSDARGAIVGLSRFNTNAHLARATLEAICYQSRDVVDAMEADSGVR EEEECCCCHHCHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCE LQVLKVDGGITGNDLCMQIQADVLGVDVVRPVVAETTALGAAYAAGLAVGFWAAPSDLRA EEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHC NWREDKRWTPTWDDDERAAGYAGWRKAVQRTLDWVDVS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDAILGEQLAESSDFIAAIDQGTTSTRCMIFDHHGAEVARHQLEHEQILPRAGWVEHNP CCCHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCH VEIWERTASVLISVLNATNLSPKDIAALGITNQRETTLVWNRHTGRPYYNAIVWQDTRTD HHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCHH RIASALDRDGRGNLIRRKAGLPPATYFSGGKLQWILENVDGVRAAAENGDALFGTPDTWV HHHHHHCCCCCCCEEEECCCCCCCCEECCCEEEEEEECCCCHHHHCCCCCEEECCCCCEE LWNLTGGPRGGGVHVTDVTNASRTMLMDLETLDWDDELLSLFSIPRAMLPEIASSAPSEP EEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCC YGVTLATGPVGGEVPITGVLGDQHAAMVGQVCLAPGEAKNTYGTGNFLLLNTGETIVRSN CEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECC NGLLTTVCYQFGNAKPVYALEGSIAVTGSAVQWLRDQLGIISGAAQSEALARQVPDNGGM CCEEEEEHHHCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCE YFVPAFSGLFAPYWRSDARGAIVGLSRFNTNAHLARATLEAICYQSRDVVDAMEADSGVR EEEECCCCHHCHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCE LQVLKVDGGITGNDLCMQIQADVLGVDVVRPVVAETTALGAAYAAGLAVGFWAAPSDLRA EEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHC NWREDKRWTPTWDDDERAAGYAGWRKAVQRTLDWVDVS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA