| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121639570
Identifier: 121639570
GI number: 121639570
Start: 4068652
End: 4069227
Strand: Reverse
Name: 121639570
Synonym: BCG_3715c
Alternate gene names: NA
Gene position: 4069227-4068652 (Counterclockwise)
Preceding gene: 121639571
Following gene: 121639569
Centisome position: 93.02
GC content: 72.92
Gene sequence:
>576_bases ATGGCGTTGTGGCTCGGTGCCGGCCCGTCGGTGGTACGGGCGCGAGCCGGGAGGCCGCCCCGCGCGCATCGGCCACACCA GGGGCTGCTGCTAGGGCGGACGGATGTCGCGGACCCGCTAGCCGTCGCAGCCAGCCTTGACGTGCTGGCCGTGTGTCTGG CTGCGGGGATGGCGGTGTCGACGGCCGCGGCCGCCACCGCTGCGGTCGCGCCGCCGCGGCTGGCGCGCGTGTTGCGCCGG GCCGCCGACCTGCTGGCATTGGGTGCCGACCCCAACATCGCCTGGTCGAGGCCGCCGGATTTGCCGCCGGGCACCCACGA TGCGCAGACCGATGCGGTACTGCGGTTGGCACGGCGTTCGGCGGCTTCGGGCGCGGCGCTCGCCGATGGCATTGTCGAAC TGGCCGTCCAGGTTCGGCACGACGCCGCACAGGCGGCCGCGGCGGCCGCCGAGCGGGCCGGTGTGCTGATCGCCGGCCCG CTGGGACTGTGCTTCTTACCGGCGTTTCTGTGTGTGGGCATTGTCCCGCTAGTAGTCGGGCTGGCCGGTGATGTCTTGCA GTTTGGCCTGGTATGA
Upstream 100 bases:
>100_bases TGCTGGTGGTCGGGCTGACACTGGCCTGCGCCGGGCTGCTGTGGTCGGACCGGATCACCGATCGGCCAGTGTTGTGAGTG CGGCGGCGGTGTTGCTGGCC
Downstream 100 bases:
>100_bases GAAAGGAATATGTTGGTGATCACCATGTTTCGTGTACTCGTGGCGCGGATGACGGCGCTGGCGGTCGACGAGTCGGGCAT GTCCACCGTGGAATACGCCA
Product: putative alanine rich membrane protein
Products: NA
Alternate protein names: Type II Secretion System Protein; Alanine Rich Membrane Protein; Type II Secretion System Protein F
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MALWLGAGPSVVRARAGRPPRAHRPHQGLLLGRTDVADPLAVAASLDVLAVCLAAGMAVSTAAAATAAVAPPRLARVLRR AADLLALGADPNIAWSRPPDLPPGTHDAQTDAVLRLARRSAASGAALADGIVELAVQVRHDAAQAAAAAAERAGVLIAGP LGLCFLPAFLCVGIVPLVVGLAGDVLQFGLV
Sequences:
>Translated_191_residues MALWLGAGPSVVRARAGRPPRAHRPHQGLLLGRTDVADPLAVAASLDVLAVCLAAGMAVSTAAAATAAVAPPRLARVLRR AADLLALGADPNIAWSRPPDLPPGTHDAQTDAVLRLARRSAASGAALADGIVELAVQVRHDAAQAAAAAAERAGVLIAGP LGLCFLPAFLCVGIVPLVVGLAGDVLQFGLV >Mature_190_residues ALWLGAGPSVVRARAGRPPRAHRPHQGLLLGRTDVADPLAVAASLDVLAVCLAAGMAVSTAAAATAAVAPPRLARVLRRA ADLLALGADPNIAWSRPPDLPPGTHDAQTDAVLRLARRSAASGAALADGIVELAVQVRHDAAQAAAAAAERAGVLIAGPL GLCFLPAFLCVGIVPLVVGLAGDVLQFGLV
Specific function: Unknown
COG id: COG2064
COG function: function code NU; Flp pilus assembly protein TadC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19130; Mature: 18998
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALWLGAGPSVVRARAGRPPRAHRPHQGLLLGRTDVADPLAVAASLDVLAVCLAAGMAVS CEEEECCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH TAAAATAAVAPPRLARVLRRAADLLALGADPNIAWSRPPDLPPGTHDAQTDAVLRLARRS HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AASGAALADGIVELAVQVRHDAAQAAAAAAERAGVLIAGPLGLCFLPAFLCVGIVPLVVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHH LAGDVLQFGLV HHHHHHHHCCC >Mature Secondary Structure ALWLGAGPSVVRARAGRPPRAHRPHQGLLLGRTDVADPLAVAASLDVLAVCLAAGMAVS EEEECCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH TAAAATAAVAPPRLARVLRRAADLLALGADPNIAWSRPPDLPPGTHDAQTDAVLRLARRS HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AASGAALADGIVELAVQVRHDAAQAAAAAAERAGVLIAGPLGLCFLPAFLCVGIVPLVVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHH LAGDVLQFGLV HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA