| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121639474
Identifier: 121639474
GI number: 121639474
Start: 3973722
End: 3974591
Strand: Reverse
Name: 121639474
Synonym: BCG_3619c
Alternate gene names: NA
Gene position: 3974591-3973722 (Counterclockwise)
Preceding gene: 121639475
Following gene: 121639468
Centisome position: 90.86
GC content: 67.59
Gene sequence:
>870_bases ATGGACGAACTTCCATGGCCCGTCCTGGGCTCGGAAGTGTTGGCCGCAAAGGCCATTCCGGAGCGGGCCATGAGACAGCT CTACGAGCCAGTCTACCCGGGCGTCTACGCCCCGGCCGGTGTGGAGCTGACGGCGCGCCAGCGCGCCCACGCGGCGTGGC TGTGGTCGCGGCGCCGCGCCGTCGTGGCCGGCAATTCGGCGGCGGCGCTGCTTGGCGCGAAGTGGGTAAACCCAGCGCTT GACGCAGAGTTAGTGCACGCCAATCGAAAGCCTCCGCCGCGCATCGTCGTGCACACGGATCGATTGGCGCCGCACGAGAC GGTTGCGGTTGACGGTGTCGCGGTAACCACCCCGGCGCGCACCGCCTTCGATATCGGGCGGCGCACACCCTCGCGGCTGC AGGCCGTTCAACGGCTGGACGCGTTGGCGAATTCGACCGATGTCAAGGTCGCCGACGTGCAGGCCGTCATTGCCGAACAT ACCGGTGCGCGCGGCCTGGTCCGCCTCCGTGCGGTGCTGCCGCTGATCGACGGGGGTGCGGAATCCCCACAGGAGACGTG GACCCGATTGGTGTTGATCGATGCCGGTCTGCCGAAGCCGCAAACACAGATCAGAGTGTTTGACGACTACGGGGACTTCG TCGCCCGCATCGACCTGGGCTACGAGCAATTGCGAGTCGGTGTCGAGTATGACGGGCCACAGCATTGGACAGACCCGGCG CAGCGGGCTCGGGACATCGAGCGGTCCACCGCGTTGCTGGATCTGGGCTGGACGATCATCAGGGTCACCAGTGAGCTGCT CCGGTACCGCCGGGGCACGTTCGTTGGCCGCGTCGATGCCGCGATGCGGGCGGCGGGATGGCGCCCATGA
Upstream 100 bases:
>100_bases TCGTTGGCGCCGAGGGTGAATCTCACGACGGGTCGTCGGCGTGTCGCGTCGTGCGATTCACTGTCGGCGGGGTGTCGGTG GGTGATGCCAGGATGTGGCC
Downstream 100 bases:
>100_bases GCGCCGAGAGTGAACCACACGACGGCGAATCGGCGTGTCGCGTCGTCAGATTCACAGTCGGCGCAAGTATGGGGCGGCGC CACGAACCTAGGCGTCGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAAALLGAKWVNPAL DAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEH TGARGLVRLRAVLPLIDGGAESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA QRARDIERSTALLDLGWTIIRVTSELLRYRRGTFVGRVDAAMRAAGWRP
Sequences:
>Translated_289_residues MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAAALLGAKWVNPAL DAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEH TGARGLVRLRAVLPLIDGGAESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA QRARDIERSTALLDLGWTIIRVTSELLRYRRGTFVGRVDAAMRAAGWRP >Mature_289_residues MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAAALLGAKWVNPAL DAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEH TGARGLVRLRAVLPLIDGGAESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA QRARDIERSTALLDLGWTIIRVTSELLRYRRGTFVGRVDAAMRAAGWRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31826; Mature: 31826
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA CCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHCCEE VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR EEECCCHHHHHHHHHCCCHHCHHHHHCCCCCCCEEEEEECCCCCCCEEEECCEEEECCCH TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA HHHHHHCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA CCHHHHHEEEEEEECCCCCCCCEEEEEECCCCEEEHHHCCHHHEEEEECCCCCCCCCCHH QRARDIERSTALLDLGWTIIRVTSELLRYRRGTFVGRVDAAMRAAGWRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCC >Mature Secondary Structure MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA CCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHCCEE VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR EEECCCHHHHHHHHHCCCHHCHHHHHCCCCCCCEEEEEECCCCCCCEEEECCEEEECCCH TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA HHHHHHCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA CCHHHHHEEEEEEECCCCCCCCEEEEEECCCCEEEHHHCCHHHEEEEECCCCCCCCCCHH QRARDIERSTALLDLGWTIIRVTSELLRYRRGTFVGRVDAAMRAAGWRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]