| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121639461
Identifier: 121639461
GI number: 121639461
Start: 3959937
End: 3960872
Strand: Reverse
Name: 121639461
Synonym: BCG_3606c
Alternate gene names: NA
Gene position: 3960872-3959937 (Counterclockwise)
Preceding gene: 121639462
Following gene: 121639460
Centisome position: 90.54
GC content: 64.21
Gene sequence:
>936_bases GTGACCGGGGTGAGCGACATTCAGGAAGCGGTTGCCCAGATCAAGGCGGCCGGGCCCAGCAAGCCGCGCCTGGCCCGTGA CCCGGTGAACCAGCCGATGATCAACAACTGGGTGGAGGCCATCGGCGACCGCAACCCCATCTATGTGGACGACGCGGCGG CTCGCGCCGCCGGCCACCCCGGAATCGTCGCGCCACCGGCCATGATTCAGGTGTGGACCATGATGGGTCTGGGCGGAGTG CGTCCGAAGGACGATCCGCTGGGACCCATCATCAAGCTGTTCGACGACGCCGGCTACATCGGTGTGGTTGCCACCAACTG CGAGCAGACCTACCACCGCTACCTATTGCCCGGGGAGCAAGTCAGCATCAGCGCCGAGCTCGGTGACGTCGTCGGACCCA AGCAAACCGCGCTCGGCGAGGGCTGGTTCATCAACCAGCACATCGTATGGCAAGTCGGGGACGAGGACGTCGCAGAGATG AATTGGCGCATCCTCAAATTCAAGCCCGCGGGTTCTCCGAGCTCGGTGCCTGACGATTTGGATCCCGACGCTATGATGCG TCCCTCGTCGTCGCGGGACACCGCGTTTTTCTGGGATGGAGTCAAGGCCCACGAATTGCGGATCCAGCGGCTTGCCGATG GCAGCCTGCGGCACCCACCGGTGCCGGCGGTGTGGCAAGACAAATCGGTGCCGATCAACTACGTCGTCTCCAGCGGTCGC GGCACGGTGTTCAGCTTCGTGGTGCATCACGCGCCGAAAGTTCCGGGTCGCACGGTGCCCTTCGTGATCGCGCTGGTGGA GCTCGAGGAAGGGGTACGCATGCTGGGCGAGCTGCGGGGGGCCGATCCTGCTCGTGTTGCGATCGGTATGCCGGTACGAG CGACCTATATCGATTTCCCCGACTGGAGCCTCTACGCATGGGAGCCTGACGAATGA
Upstream 100 bases:
>100_bases AGACCAAGCGCAACCTGGTGATCACCTTCGGCGGGGGTGTGAACGAAGTCATGCGCGAGATGATCGCCGCGTCTGGCCTC AAAGTGCCAAGGGTGCCCAG
Downstream 100 bases:
>100_bases CGGTTGTTGGTGCTGTGCTGCCTGAGCTGAAGCTCTACGGAGACCCGACGTTCATCGTCTCAACGGCGCTGGCTACCAGG GACTTCCAGGATGTGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTGVSDIQEAVAQIKAAGPSKPRLARDPVNQPMINNWVEAIGDRNPIYVDDAAARAAGHPGIVAPPAMIQVWTMMGLGGV RPKDDPLGPIIKLFDDAGYIGVVATNCEQTYHRYLLPGEQVSISAELGDVVGPKQTALGEGWFINQHIVWQVGDEDVAEM NWRILKFKPAGSPSSVPDDLDPDAMMRPSSSRDTAFFWDGVKAHELRIQRLADGSLRHPPVPAVWQDKSVPINYVVSSGR GTVFSFVVHHAPKVPGRTVPFVIALVELEEGVRMLGELRGADPARVAIGMPVRATYIDFPDWSLYAWEPDE
Sequences:
>Translated_311_residues MTGVSDIQEAVAQIKAAGPSKPRLARDPVNQPMINNWVEAIGDRNPIYVDDAAARAAGHPGIVAPPAMIQVWTMMGLGGV RPKDDPLGPIIKLFDDAGYIGVVATNCEQTYHRYLLPGEQVSISAELGDVVGPKQTALGEGWFINQHIVWQVGDEDVAEM NWRILKFKPAGSPSSVPDDLDPDAMMRPSSSRDTAFFWDGVKAHELRIQRLADGSLRHPPVPAVWQDKSVPINYVVSSGR GTVFSFVVHHAPKVPGRTVPFVIALVELEEGVRMLGELRGADPARVAIGMPVRATYIDFPDWSLYAWEPDE >Mature_310_residues TGVSDIQEAVAQIKAAGPSKPRLARDPVNQPMINNWVEAIGDRNPIYVDDAAARAAGHPGIVAPPAMIQVWTMMGLGGVR PKDDPLGPIIKLFDDAGYIGVVATNCEQTYHRYLLPGEQVSISAELGDVVGPKQTALGEGWFINQHIVWQVGDEDVAEMN WRILKFKPAGSPSSVPDDLDPDAMMRPSSSRDTAFFWDGVKAHELRIQRLADGSLRHPPVPAVWQDKSVPINYVVSSGRG TVFSFVVHHAPKVPGRTVPFVIALVELEEGVRMLGELRGADPARVAIGMPVRATYIDFPDWSLYAWEPDE
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33972; Mature: 33841
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVSDIQEAVAQIKAAGPSKPRLARDPVNQPMINNWVEAIGDRNPIYVDDAAARAAGHP CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECHHHHHCCCC GIVAPPAMIQVWTMMGLGGVRPKDDPLGPIIKLFDDAGYIGVVATNCEQTYHRYLLPGEQ CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCC VSISAELGDVVGPKQTALGEGWFINQHIVWQVGDEDVAEMNWRILKFKPAGSPSSVPDDL EEEEEHHCCCCCCCHHHCCCCEEECCEEEEEECCCCHHHCCEEEEEEECCCCCCCCCCCC DPDAMMRPSSSRDTAFFWDGVKAHELRIQRLADGSLRHPPVPAVWQDKSVPINYVVSSGR CCCHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCC GTVFSFVVHHAPKVPGRTVPFVIALVELEEGVRMLGELRGADPARVAIGMPVRATYIDFP CCEEHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECC DWSLYAWEPDE CCEEEEECCCC >Mature Secondary Structure TGVSDIQEAVAQIKAAGPSKPRLARDPVNQPMINNWVEAIGDRNPIYVDDAAARAAGHP CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECHHHHHCCCC GIVAPPAMIQVWTMMGLGGVRPKDDPLGPIIKLFDDAGYIGVVATNCEQTYHRYLLPGEQ CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCC VSISAELGDVVGPKQTALGEGWFINQHIVWQVGDEDVAEMNWRILKFKPAGSPSSVPDDL EEEEEHHCCCCCCCHHHCCCCEEECCEEEEEECCCCHHHCCEEEEEEECCCCCCCCCCCC DPDAMMRPSSSRDTAFFWDGVKAHELRIQRLADGSLRHPPVPAVWQDKSVPINYVVSSGR CCCHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCC GTVFSFVVHHAPKVPGRTVPFVIALVELEEGVRMLGELRGADPARVAIGMPVRATYIDFP CCEEHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECC DWSLYAWEPDE CCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA