| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121639450
Identifier: 121639450
GI number: 121639450
Start: 3946709
End: 3947836
Strand: Reverse
Name: 121639450
Synonym: BCG_3595c
Alternate gene names: NA
Gene position: 3947836-3946709 (Counterclockwise)
Preceding gene: 121639452
Following gene: 121639449
Centisome position: 90.25
GC content: 64.01
Gene sequence:
>1128_bases GTGTACTCCGACCCGCTGCGCGAGGCGATCGCAGAAGCCGAGCAGCTGGTAGCCGCCGCCCCGCACATCGAGACTGAAGC CGACCTGCTCGAAGGGCTGCAATACCTGGCCGGCTGCATCGCGGGCTGCATGCACCTGGCCTTCGACTACGAGCGTGACC ACCCGTTCCTGCAGTCCGGAACAGGGCCGTTCACGAAGATGGGCCTGGACAACCCCGACACCCTCTACTTCGGCACCCGG CTGCAGGCCAACCGCGACTATGTGGTCAGCGGACGGCGCGGCACCACCACCGACCTGAGCTTTCAGCTGCTCGGCGGCGA GTACACTGACTATAACGTGCCGGCCAGCCAGGCCGCGTTCGACGACCGTGAGCTCGACATCGCCGCGGACGGCAGCTTCG AATGGCGGTTGCGGCCCAGCGCTCCCGGGCAACTAGTGATCCGGGAGGTGTACGGCGATTGGTCACAACAGCGCGGCACG CTGGCCATCGCCAGGCTGGACACCGTCGGCACCGCGCCGCCGCCGCTGACTCGCGAGCTCATGGAAAAGCGTTATGCCAC AGCGGGATCCCAGCTTGTGAACCGGGTGAAAACCTGGTTACAGTTTCCCCAGTGGTTCTACCTCAATATCCCGGTTAACA CCATGGTGGCGCCTCGGTTGACTCCCGGTGGCCTGGCCACCCAATACTCGTCAGCCGGTCATTTCGAGCTGCGGCCGGGT CAAGCGCTGGTGATCACGGTGCCGGTGAGCGACGCCCCCTACTTAGGGTTTCAGTTGGGCAGCATGTGGTACATCTCGCT GGACTATATCAATCATCAGACCTCGTTGAATGCCAGCCAGGCCCAAGCGGACCCGGATGGCAAGGTGCGCATCGTGGTCG CCGAGCAGAATCCGGGTGTGACCAACTGGGTGGAAACGCTCGGCCATCGGCGCGGGTTTCTGCAGTTCCGCTGGCAGCGG GTATCCCGTGAGCTCACCGAGGCCGATGGGCCCACCGTCGAACTGGTCGACTTCGACGCCATCCCGGCGGCACTGCCGCA TTACCAGCACAACAAGATTTCCGAGGATGATTGGCGGGCGCGAATTGCGTTGCGTCAACGGCAAATCGCGACCAGGATGC TGGGATGA
Upstream 100 bases:
>100_bases GGCTCTGGAAGCGAGCGGGCTTTGTCTTCAATTGCCGTAAATGACGGGGGCAGATGTTCGCCATTGACGCAAAACAGGAA CACGTTCTAGTGTCGAAGTC
Downstream 100 bases:
>100_bases CCGGGATGCTCAAGCGCAAGGTGATCGTCGTCAGTGGCGTCGGACCGGGGCTGGGCACGACGCTGGCGCACCGATGTGCG CGAGACGGCGCCGATCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTR LQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGT LAIARLDTVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQR VSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQRQIATRMLG
Sequences:
>Translated_375_residues MYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTR LQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGT LAIARLDTVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQR VSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQRQIATRMLG >Mature_375_residues MYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTR LQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGT LAIARLDTVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQR VSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQRQIATRMLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41903; Mature: 41903
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF CCCCEECCCCCCCEEEEEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHCC DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL CCCCEEEEECCCEEEEECCCCCHHEEHHHHHCCHHHCCCCEEEEEECCCCCCCCHHHHHH MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHEECCCCCCCCCHHCCCCCCCEEECCC QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV CEEEEEEECCCCCCCCEEECCEEEEEEEEECCCCCCCCHHHCCCCCCCEEEEEECCCCCH TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCCCCCCHHHHH RIALRQRQIATRMLG HHHHHHHHHHHHHCC >Mature Secondary Structure MYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF CCCCEECCCCCCCEEEEEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHCC DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL CCCCEEEEECCCEEEEECCCCCHHEEHHHHHCCHHHCCCCEEEEEECCCCCCCCHHHHHH MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHEECCCCCCCCCHHCCCCCCCEEECCC QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV CEEEEEEECCCCCCCCEEECCEEEEEEEEECCCCCCCCHHHCCCCCCCEEEEEECCCCCH TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCCCCCCHHHHH RIALRQRQIATRMLG HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA