| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is mce4F
Identifier: 121639413
GI number: 121639413
Start: 3891172
End: 3892866
Strand: Reverse
Name: mce4F
Synonym: BCG_3558c
Alternate gene names: NA
Gene position: 3892866-3891172 (Counterclockwise)
Preceding gene: 121639414
Following gene: 121639412
Centisome position: 88.99
GC content: 67.96
Gene sequence:
>1695_bases ATGATCGACCGACTCGCCAAGATCCAGTTGTCCATTTTTGCGGTGATCACCGTCATCACCCTGAGCGTGATGGCGATCTT TTATCTGCGTCTGCCCGCCACGTTCGGCATCGGAACCTACGGCGTGAGTGCCGACTTCGTCGCGGGCGGTGGCCTGTACA AGAACGCCAACGTCACCTACCGCGGTGTCGCGGTCGGGCGGGTGGAGTCGGTGGGGCTAAATCCCAATGGCGTTACCGCG CACATGCGACTGAACAGTGGCACCGCCATTCCGTCGAACGTCACCGCCACCGTACGCAGCGTTTCGGCCATCGGTGAGCA GTACATCGACCTAGTGCCGCCGGAGAACCCGTCGTCGACCAAGTTGCGCAACGGCTTCCGGATCCAGCGGCAGAACACCC GAATCGGGCAAGACGTCGCCGACCTGTTGCGTCAGGCCGAGACGCTGCTCGGCAGCCTTGGCGACACCCGGCTGCGGGAG CTGCTGCACGAGGCGTTCATCGCGACCAATGGCGCCGGTCCGGAACTGGCCCGGCTGATCGAGTCGGCCCGGTTGCTGGT GGATGAGGCCAACGCCAACTATCCACAGGTTTCGCAGTTGATCGATCAGGCCGGCCCGTTCCTGCAAGCCCAGATCCGCG CCGGCGGGGACATCAAGTCACTCGCCGATGGGCTGGCGCGGTTCACCTGGCAGCTCCGTGCGGCAGACCCGCGGCTGCGC GACACGTTGGCCGGCGCCCCGGATGCGATCGACGAGGCCAACACCGCGTTCTCCGGGATTCGTCCTTCGTTTCCCGCGCT GGCGGCCAGTCTGGCCAACCTGGGCCGGGTGGGCGTGATCTATCACAAGTCGATCGAACAGCTCCTGGTGGTTTTCCCGG CGCTGTTCGCCGCGATCATCACCTCGGCGGGCGGCGTACCCCAGGACGAGGGCGCCAAGCTGGACTTCAAGATCGACCTG CACGACCCGCCGCCCTGCATGACCGGGTTCTTGCCCCCGCCGCTGGTCCGGTCGCCGGCCGACGAGTCGGTACGCGAGAT TCCCCGGGACATGTACTGCAAGACCGCGCAGAACGACCCGAGCACGGTGCGCGGCGCTCGCAACTACCCGTGCCAGGAAT TCCCCGGTAAGCGGGCACCGACGGTGCAGTTATGTCGGGATCCGCGTGGCTATGTGCCAGTTGGAACCAACCCGTGGCGC GGTCCGCCGATCCCGTACGGCACCGAGGTGACGGATGGGCGAAACATTCTGCCGCCCAACAAGTTCCCTTACATCCCGCC GGGCGCGGATCCCGACCCGGGCGTGCCCATCGTCGGACCGCCGCCACCCGGCCAGGTGGCCGGCCCCGGGCCGGCGCCGC ACCAGCCGGCGCAGCCTGCGCCGCCGCCCAACGACAACGGTCCGCCTCCACCGTTCACGTCATGGATGCCGCCCGGGTAC CCGCCGGAGCCACCCCAGGTGCCATACCCGGCGACCATTCCGCCGCCGCCACCACCGGAAGGCACCGGGCCTCCGCCCGG GCCGGCGCCTGGCCCCCAACCGCAGGCCAGCGGTCCGGCCTACACCATCTATGACCAACTCAGCGGAGCCTTCGCGGACC CGGCCGGCGGCACTGGTATCTTCGCGCCCGGGATGACGGGCGCATCCAGCGCCGAGAATTGGGTGGATCTCATGCGCGAT CCGAGGCAGCTGTAG
Upstream 100 bases:
>100_bases CCCGACTTCCTGATTGGCGAACTGGCCAACCTGTCCGGGCAAGCGGCCGACCCATTTAAGATTCCACCCGGTACGGCGTC GGGACAGTAGGGGCCCGGAC
Downstream 100 bases:
>100_bases TGGCCGCAGATACCGGTGTAGCCGGCGGACAGCAGTCGACGACGCGGCGCGCTCGTCGTAAGGCGTCCCGCCCCGCGGGT CCGGCGGAAGGCGAGTCGAG
Product: Mce-family protein mce4F
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family F; Mce Family F; MCE Family Protein; MCE-Family Protein; Mce-Family F; Mce Related Protein; Mce-Related Protein; MCE-Family; Mce Family
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVAGGGLYKNANVTYRGVAVGRVESVGLNPNGVTA HMRLNSGTAIPSNVTATVRSVSAIGEQYIDLVPPENPSSTKLRNGFRIQRQNTRIGQDVADLLRQAETLLGSLGDTRLRE LLHEAFIATNGAGPELARLIESARLLVDEANANYPQVSQLIDQAGPFLQAQIRAGGDIKSLADGLARFTWQLRAADPRLR DTLAGAPDAIDEANTAFSGIRPSFPALAASLANLGRVGVIYHKSIEQLLVVFPALFAAIITSAGGVPQDEGAKLDFKIDL HDPPPCMTGFLPPPLVRSPADESVREIPRDMYCKTAQNDPSTVRGARNYPCQEFPGKRAPTVQLCRDPRGYVPVGTNPWR GPPIPYGTEVTDGRNILPPNKFPYIPPGADPDPGVPIVGPPPPGQVAGPGPAPHQPAQPAPPPNDNGPPPPFTSWMPPGY PPEPPQVPYPATIPPPPPPEGTGPPPGPAPGPQPQASGPAYTIYDQLSGAFADPAGGTGIFAPGMTGASSAENWVDLMRD PRQL
Sequences:
>Translated_564_residues MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVAGGGLYKNANVTYRGVAVGRVESVGLNPNGVTA HMRLNSGTAIPSNVTATVRSVSAIGEQYIDLVPPENPSSTKLRNGFRIQRQNTRIGQDVADLLRQAETLLGSLGDTRLRE LLHEAFIATNGAGPELARLIESARLLVDEANANYPQVSQLIDQAGPFLQAQIRAGGDIKSLADGLARFTWQLRAADPRLR DTLAGAPDAIDEANTAFSGIRPSFPALAASLANLGRVGVIYHKSIEQLLVVFPALFAAIITSAGGVPQDEGAKLDFKIDL HDPPPCMTGFLPPPLVRSPADESVREIPRDMYCKTAQNDPSTVRGARNYPCQEFPGKRAPTVQLCRDPRGYVPVGTNPWR GPPIPYGTEVTDGRNILPPNKFPYIPPGADPDPGVPIVGPPPPGQVAGPGPAPHQPAQPAPPPNDNGPPPPFTSWMPPGY PPEPPQVPYPATIPPPPPPEGTGPPPGPAPGPQPQASGPAYTIYDQLSGAFADPAGGTGIFAPGMTGASSAENWVDLMRD PRQL >Mature_564_residues MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVAGGGLYKNANVTYRGVAVGRVESVGLNPNGVTA HMRLNSGTAIPSNVTATVRSVSAIGEQYIDLVPPENPSSTKLRNGFRIQRQNTRIGQDVADLLRQAETLLGSLGDTRLRE LLHEAFIATNGAGPELARLIESARLLVDEANANYPQVSQLIDQAGPFLQAQIRAGGDIKSLADGLARFTWQLRAADPRLR DTLAGAPDAIDEANTAFSGIRPSFPALAASLANLGRVGVIYHKSIEQLLVVFPALFAAIITSAGGVPQDEGAKLDFKIDL HDPPPCMTGFLPPPLVRSPADESVREIPRDMYCKTAQNDPSTVRGARNYPCQEFPGKRAPTVQLCRDPRGYVPVGTNPWR GPPIPYGTEVTDGRNILPPNKFPYIPPGADPDPGVPIVGPPPPGQVAGPGPAPHQPAQPAPPPNDNGPPPPFTSWMPPGY PPEPPQVPYPATIPPPPPPEGTGPPPGPAPGPQPQASGPAYTIYDQLSGAFADPAGGTGIFAPGMTGASSAENWVDLMRD PRQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59579; Mature: 59579
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVAGGGLYKNANVTY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEECCCEEE RGVAVGRVESVGLNPNGVTAHMRLNSGTAIPSNVTATVRSVSAIGEQYIDLVPPENPSST EEEEECCEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC KLRNGFRIQRQNTRIGQDVADLLRQAETLLGSLGDTRLRELLHEAFIATNGAGPELARLI HHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHH ESARLLVDEANANYPQVSQLIDQAGPFLQAQIRAGGDIKSLADGLARFTWQLRAADPRLR HHHHHHHCCCCCCCHHHHHHHHHCCCEEEEHCCCCCCHHHHHHHHHHHEEEEECCCCHHH DTLAGAPDAIDEANTAFSGIRPSFPALAASLANLGRVGVIYHKSIEQLLVVFPALFAAII HHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHH TSAGGVPQDEGAKLDFKIDLHDPPPCMTGFLPPPLVRSPADESVREIPRDMYCKTAQNDP HHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCCH STVRGARNYPCQEFPGKRAPTVQLCRDPRGYVPVGTNPWRGPPIPYGTEVTDGRNILPPN HHHCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KFPYIPPGADPDPGVPIVGPPPPGQVAGPGPAPHQPAQPAPPPNDNGPPPPFTSWMPPGY CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPEPPQVPYPATIPPPPPPEGTGPPPGPAPGPQPQASGPAYTIYDQLSGAFADPAGGTGI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCEE FAPGMTGASSAENWVDLMRDPRQL ECCCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVAGGGLYKNANVTY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEECCCEEE RGVAVGRVESVGLNPNGVTAHMRLNSGTAIPSNVTATVRSVSAIGEQYIDLVPPENPSST EEEEECCEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC KLRNGFRIQRQNTRIGQDVADLLRQAETLLGSLGDTRLRELLHEAFIATNGAGPELARLI HHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHH ESARLLVDEANANYPQVSQLIDQAGPFLQAQIRAGGDIKSLADGLARFTWQLRAADPRLR HHHHHHHCCCCCCCHHHHHHHHHCCCEEEEHCCCCCCHHHHHHHHHHHEEEEECCCCHHH DTLAGAPDAIDEANTAFSGIRPSFPALAASLANLGRVGVIYHKSIEQLLVVFPALFAAII HHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHH TSAGGVPQDEGAKLDFKIDLHDPPPCMTGFLPPPLVRSPADESVREIPRDMYCKTAQNDP HHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCCH STVRGARNYPCQEFPGKRAPTVQLCRDPRGYVPVGTNPWRGPPIPYGTEVTDGRNILPPN HHHCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KFPYIPPGADPDPGVPIVGPPPPGQVAGPGPAPHQPAQPAPPPNDNGPPPPFTSWMPPGY CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPEPPQVPYPATIPPPPPPEGTGPPPGPAPGPQPQASGPAYTIYDQLSGAFADPAGGTGI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCEE FAPGMTGASSAENWVDLMRDPRQL ECCCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA