| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121639401
Identifier: 121639401
GI number: 121639401
Start: 3880113
End: 3881603
Strand: Reverse
Name: 121639401
Synonym: BCG_3546c
Alternate gene names: NA
Gene position: 3881603-3880113 (Counterclockwise)
Preceding gene: 121639402
Following gene: 121639400
Centisome position: 88.73
GC content: 66.13
Gene sequence:
>1491_bases ATGGAGCACGACGTGGCGACTTCGCCGCCGGCAGGATGGTATACCGATCCTGACGGTTCAGCGGGGCAACGATATTGGGA CGGTGACCGCTGGACCAGACATCGTCGACCCAACCCCTCTGCACCACGATCACCGCTGGCCCTGCGTGTCGACGGTCTCC GGAGCCGCTGGCTGGGCATGCCGGCCGGCCTGCGGTTGACAGTTCCGGTCGCGGCAGTGCTGACGATGGTAGGTGTCGCG GTCTACGCCTGGATCAGGCCGCTGCCAGACGACTGGTCGCAGCTGCCGAAGCGACTCAGTTGCCAGTTGCGGCCCGGGCC GACACCGCCCGCGACCATTACCGTGGCCTCCGTGGACGTCTCGCATCCCCGAGGCGCGGTCCTTCGGCTGGTAGTTCGAT TCGCCGAGCCGCTGCCACCGTCGCCATCGGGCTCGTTTGCGTCGGGCTTTGCCGGTTACCTGCTGACCTACACCATCGCC AACAATGGCAAGGAGTTCGCCGAGCTGGGCCCGCAGCAGGACACCGATGAACTTGCCATCAGAAAGCCCGGCGAAAGCAG AGGCACCGAGCCGAACATGCGGCCGGACCGGAACACCAATGCGCGCAGAACTGCCCCCGATACCGTGGAGATCAACCTCG AGACAAAGCGACTGGGGCTCGATCGAGGCGCCGGTGGATCCCCAGCTCACCTTCGCCGCTCAGTTCCGCACGCCGTCGAC CGTGACGGTGGACTTCGGGTCGCAATTCTGTCAGGGCGAGCGTTTGGCCGGGCAGCGTCGTTAATCGTCGGCTCACCAAG CCGCCGTCTTTGCACGTACGTTTCGGCGATCGACGTCTCGCGATGGCTATCAACAGCCCGAACGGCGGTTGGGTGCGCGC AATTTCGTCGAATTGGGGCGCTCGGTGGTCACCGAGGCGGTGTCAATGCGAGGATTGCTGCCCGTGGCAGGTCATTGGGT CTCCGTGCTCACCGGGCTCGTGCCGCTGGCGTTGGTCATTGCGCTCTCGCCGTTGTCGGTGATCCCAGCGGTACTGGTCG TACACTCGCCGCAGCCGCGGCCGAGCAGCCTGGCCTTCCTGGGCGGCTGGCTGTTGGGCTTGGCCGTGGTGACCGCCGTC TTTGTTGCGGCCTCCGGCGCACTTGGCGGTTTGAGCACAACATCGCCGGCCTGGGCATCCTGGCTACGGGTGGTCCTCGG GTCGGCACTGATCGTGTTCGGCGTGCTTCGGTGGCTGACCCGGCATCGCCACACCGAAATGCCGGGCTGGATGCGCGCAT TCGCCAGCTTCACCCCGGCACGCGCCGGATTGGTAGGGGCCGTGCTGGTGGTGGTGAGACCCGAGGTGCTGATCATTTGC GCGGCGGCCGGATTGGCCATCGGCAGCGGCGGCCACGGCGCCGCGGGTTCCTGGATTTACACGGCATTCTTTGCCATGTT GGCTGCATCCACGGTCGCGATCCCGATATTGGCCTACGTGGCTGCCGGTGA
Upstream 100 bases:
>100_bases GGCGACCACGTGCAGATCCTCGATTCGCTACCGGAGTTGTTCGATGCGCCGCCGTAGTCCGCGAGGAGCGGCACCGCAGC TGATCCTTACCGACTGTTGA
Downstream 100 bases:
>100_bases CCGACTCGACGATTCGCTGGAACGACTTAAAGACTGGATGGAGAAGAACCATGCCGGGATGGTCGCGGCCATTCTGGTCG TGATCGGTTTACTGCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MEHDVATSPPAGWYTDPDGSAGQRYWDGDRWTRHRRPNPSAPRSPLALRVDGLRSRWLGMPAGLRLTVPVAAVLTMVGVA VYAWIRPLPDDWSQLPKRLSCQLRPGPTPPATITVASVDVSHPRGAVLRLVVRFAEPLPPSPSGSFASGFAGYLLTYTIA NNGKEFAELGPQQDTDELAIRKPGESRGTEPNMRPDRNTNARRTAPDTVEINLETKRLGLDRGAGGSPAHLRRSVPHAVD RDGGLRVAILSGRAFGRAASLIVGSPSRRLCTYVSAIDVSRWLSTARTAVGCAQFRRIGALGGHRGGVNARIAARGRSLG LRAHRARAAGVGHCALAVVGDPSGTGRTLAAAAAEQPGLPGRLAVGLGRGDRRLCCGLRRTWRFEHNIAGLGILATGGPR VGTDRVRRASVADPASPHRNAGLDARIRQLHPGTRRIGRGRAGGGETRGADHLRGGRIGHRQRRPRRRGFLDLHGILCHV GCIHGRDPDIGLRGCR
Sequences:
>Translated_496_residues MEHDVATSPPAGWYTDPDGSAGQRYWDGDRWTRHRRPNPSAPRSPLALRVDGLRSRWLGMPAGLRLTVPVAAVLTMVGVA VYAWIRPLPDDWSQLPKRLSCQLRPGPTPPATITVASVDVSHPRGAVLRLVVRFAEPLPPSPSGSFASGFAGYLLTYTIA NNGKEFAELGPQQDTDELAIRKPGESRGTEPNMRPDRNTNARRTAPDTVEINLETKRLGLDRGAGGSPAHLRRSVPHAVD RDGGLRVAILSGRAFGRAASLIVGSPSRRLCTYVSAIDVSRWLSTARTAVGCAQFRRIGALGGHRGGVNARIAARGRSLG LRAHRARAAGVGHCALAVVGDPSGTGRTLAAAAAEQPGLPGRLAVGLGRGDRRLCCGLRRTWRFEHNIAGLGILATGGPR VGTDRVRRASVADPASPHRNAGLDARIRQLHPGTRRIGRGRAGGGETRGADHLRGGRIGHRQRRPRRRGFLDLHGILCHV GCIHGRDPDIGLRGCR >Mature_496_residues MEHDVATSPPAGWYTDPDGSAGQRYWDGDRWTRHRRPNPSAPRSPLALRVDGLRSRWLGMPAGLRLTVPVAAVLTMVGVA VYAWIRPLPDDWSQLPKRLSCQLRPGPTPPATITVASVDVSHPRGAVLRLVVRFAEPLPPSPSGSFASGFAGYLLTYTIA NNGKEFAELGPQQDTDELAIRKPGESRGTEPNMRPDRNTNARRTAPDTVEINLETKRLGLDRGAGGSPAHLRRSVPHAVD RDGGLRVAILSGRAFGRAASLIVGSPSRRLCTYVSAIDVSRWLSTARTAVGCAQFRRIGALGGHRGGVNARIAARGRSLG LRAHRARAAGVGHCALAVVGDPSGTGRTLAAAAAEQPGLPGRLAVGLGRGDRRLCCGLRRTWRFEHNIAGLGILATGGPR VGTDRVRRASVADPASPHRNAGLDARIRQLHPGTRRIGRGRAGGGETRGADHLRGGRIGHRQRRPRRRGFLDLHGILCHV GCIHGRDPDIGLRGCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53078; Mature: 53078
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHDVATSPPAGWYTDPDGSAGQRYWDGDRWTRHRRPNPSAPRSPLALRVDGLRSRWLGM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCHHHHHCCC PAGLRLTVPVAAVLTMVGVAVYAWIRPLPDDWSQLPKRLSCQLRPGPTPPATITVASVDV CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCEEEEEEEEC SHPRGAVLRLVVRFAEPLPPSPSGSFASGFAGYLLTYTIANNGKEFAELGPQQDTDELAI CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCEEEEEEECCCCHHHHHCCCCCCCCCEEE RKPGESRGTEPNMRPDRNTNARRTAPDTVEINLETKRLGLDRGAGGSPAHLRRSVPHAVD ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCHHHHHHCCCHHHC RDGGLRVAILSGRAFGRAASLIVGSPSRRLCTYVSAIDVSRWLSTARTAVGCAQFRRIGA CCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGHRGGVNARIAARGRSLGLRAHRARAAGVGHCALAVVGDPSGTGRTLAAAAAEQPGLP CCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCEEEHHHHCCCCCC GRLAVGLGRGDRRLCCGLRRTWRFEHNIAGLGILATGGPRVGTDRVRRASVADPASPHRN CEEEEECCCCCHHHHHHHHHHEEECCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCC AGLDARIRQLHPGTRRIGRGRAGGGETRGADHLRGGRIGHRQRRPRRRGFLDLHGILCHV CCCCHHHHHCCCCHHHHCCCCCCCCCCCCCHHCCCCCCCHHHCCHHHCCCHHHHHHHHHH GCIHGRDPDIGLRGCR HHCCCCCCCCCCCCCC >Mature Secondary Structure MEHDVATSPPAGWYTDPDGSAGQRYWDGDRWTRHRRPNPSAPRSPLALRVDGLRSRWLGM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCHHHHHCCC PAGLRLTVPVAAVLTMVGVAVYAWIRPLPDDWSQLPKRLSCQLRPGPTPPATITVASVDV CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCEEEEEEEEC SHPRGAVLRLVVRFAEPLPPSPSGSFASGFAGYLLTYTIANNGKEFAELGPQQDTDELAI CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCEEEEEEECCCCHHHHHCCCCCCCCCEEE RKPGESRGTEPNMRPDRNTNARRTAPDTVEINLETKRLGLDRGAGGSPAHLRRSVPHAVD ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCHHHHHHCCCHHHC RDGGLRVAILSGRAFGRAASLIVGSPSRRLCTYVSAIDVSRWLSTARTAVGCAQFRRIGA CCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGHRGGVNARIAARGRSLGLRAHRARAAGVGHCALAVVGDPSGTGRTLAAAAAEQPGLP CCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCEEEHHHHCCCCCC GRLAVGLGRGDRRLCCGLRRTWRFEHNIAGLGILATGGPRVGTDRVRRASVADPASPHRN CEEEEECCCCCHHHHHHHHHHEEECCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCC AGLDARIRQLHPGTRRIGRGRAGGGETRGADHLRGGRIGHRQRRPRRRGFLDLHGILCHV CCCCHHHHHCCCCHHHHCCCCCCCCCCCCCHHCCCCCCCHHHCCHHHCCCHHHHHHHHHH GCIHGRDPDIGLRGCR HHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA