Definition Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome.
Accession NC_008769
Length 4,374,522

Click here to switch to the map view.

The map label for this gene is 121639167

Identifier: 121639167

GI number: 121639167

Start: 3613122

End: 3613640

Strand: Reverse

Name: 121639167

Synonym: BCG_3307c

Alternate gene names: NA

Gene position: 3613640-3613122 (Counterclockwise)

Preceding gene: 121639168

Following gene: 121639165

Centisome position: 82.61

GC content: 60.12

Gene sequence:

>519_bases
ATGAGCTATCCGGAGAATGTCCTGGCCGCTGGCGAGCAGGTCGTTCTGCACCGCCATCCGCACTGGAATCGCTTAATCTG
GCCCGTCGTGGTGCTGGTCTTGCTGACCGGGTTGGCGGCGTTCGGGTCCGGATTCGTCAACTCGACACCTTGGCAGCAGA
TCGCTAAGAACGTGATTCACGCGGTCATCTGGGGGATCTGGTTGGTGATCGTCGGCTGGCTCACGCTGTGGCCATTCCTG
AGCTGGCTGACCACACATTTCGTGGTGACCAACCGGCGGGTGATGTTCCGGCATGGTGTGCTGACCCGCAGCGGGATCGA
CATACCGCTAGCACGGATCAACAGCGTGGAGTTCCGGGACCGGATCTTCGAGCGGATTTTTCGCACCGGGACGTTGATTA
TCGAGTCCGCGTCACAAGATCCGCTCGAGTTCTACAACATTCCGCGCCTGCGGGAGGTGCATGCGTTGCTGTATCACAAG
GTTTTCGACACCCTGGGCTCCGACGAGTCGCCCAGCTGA

Upstream 100 bases:

>100_bases
GGACGTCGGCGGTCGAACGGTAGTTGTTTCAGCGGGCGACGTGGTGCATTTGCGTTAACTCGCGCGGAGCTGGCGTCCCC
AAAAGATTAAGGTCGCGGGC

Downstream 100 bases:

>100_bases
GCGAACCGGTTGGCCCGGTTACGCCAGGCCCGCAGCAGGGTGACGTTGCCGTCCTCGAAGCCGCCCTCCAAGACGTCCTC
GAAGACTTCGGCGATGCCGC

Product: putative transmembrane protein

Products: NA

Alternate protein names: Membrane-Flanked Domain Protein; Membrane-Flanked Domain; Membrane Flanked Domain-Containing Protein; Conserved Membrane Protein; Integral Membrane Protein

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIHAVIWGIWLVIVGWLTLWPFL
SWLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRDRIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHK
VFDTLGSDESPS

Sequences:

>Translated_172_residues
MSYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIHAVIWGIWLVIVGWLTLWPFL
SWLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRDRIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHK
VFDTLGSDESPS
>Mature_171_residues
SYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIHAVIWGIWLVIVGWLTLWPFLS
WLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRDRIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHKV
FDTLGSDESPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19819; Mature: 19688

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIH
CCCCHHHHHCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
AVIWGIWLVIVGWLTLWPFLSWLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHCCHHHHH
RIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHKVFDTLGSDESPS
HHHHHHHHHCHHEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIH
CCCHHHHHCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
AVIWGIWLVIVGWLTLWPFLSWLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHCCHHHHH
RIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHKVFDTLGSDESPS
HHHHHHHHHCHHEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA