| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121639167
Identifier: 121639167
GI number: 121639167
Start: 3613122
End: 3613640
Strand: Reverse
Name: 121639167
Synonym: BCG_3307c
Alternate gene names: NA
Gene position: 3613640-3613122 (Counterclockwise)
Preceding gene: 121639168
Following gene: 121639165
Centisome position: 82.61
GC content: 60.12
Gene sequence:
>519_bases ATGAGCTATCCGGAGAATGTCCTGGCCGCTGGCGAGCAGGTCGTTCTGCACCGCCATCCGCACTGGAATCGCTTAATCTG GCCCGTCGTGGTGCTGGTCTTGCTGACCGGGTTGGCGGCGTTCGGGTCCGGATTCGTCAACTCGACACCTTGGCAGCAGA TCGCTAAGAACGTGATTCACGCGGTCATCTGGGGGATCTGGTTGGTGATCGTCGGCTGGCTCACGCTGTGGCCATTCCTG AGCTGGCTGACCACACATTTCGTGGTGACCAACCGGCGGGTGATGTTCCGGCATGGTGTGCTGACCCGCAGCGGGATCGA CATACCGCTAGCACGGATCAACAGCGTGGAGTTCCGGGACCGGATCTTCGAGCGGATTTTTCGCACCGGGACGTTGATTA TCGAGTCCGCGTCACAAGATCCGCTCGAGTTCTACAACATTCCGCGCCTGCGGGAGGTGCATGCGTTGCTGTATCACAAG GTTTTCGACACCCTGGGCTCCGACGAGTCGCCCAGCTGA
Upstream 100 bases:
>100_bases GGACGTCGGCGGTCGAACGGTAGTTGTTTCAGCGGGCGACGTGGTGCATTTGCGTTAACTCGCGCGGAGCTGGCGTCCCC AAAAGATTAAGGTCGCGGGC
Downstream 100 bases:
>100_bases GCGAACCGGTTGGCCCGGTTACGCCAGGCCCGCAGCAGGGTGACGTTGCCGTCCTCGAAGCCGCCCTCCAAGACGTCCTC GAAGACTTCGGCGATGCCGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: Membrane-Flanked Domain Protein; Membrane-Flanked Domain; Membrane Flanked Domain-Containing Protein; Conserved Membrane Protein; Integral Membrane Protein
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIHAVIWGIWLVIVGWLTLWPFL SWLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRDRIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHK VFDTLGSDESPS
Sequences:
>Translated_172_residues MSYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIHAVIWGIWLVIVGWLTLWPFL SWLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRDRIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHK VFDTLGSDESPS >Mature_171_residues SYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIHAVIWGIWLVIVGWLTLWPFLS WLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRDRIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHKV FDTLGSDESPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19819; Mature: 19688
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIH CCCCHHHHHCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AVIWGIWLVIVGWLTLWPFLSWLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHCCHHHHH RIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHKVFDTLGSDESPS HHHHHHHHHCHHEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAFGSGFVNSTPWQQIAKNVIH CCCHHHHHCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AVIWGIWLVIVGWLTLWPFLSWLTTHFVVTNRRVMFRHGVLTRSGIDIPLARINSVEFRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHCCHHHHH RIFERIFRTGTLIIESASQDPLEFYNIPRLREVHALLYHKVFDTLGSDESPS HHHHHHHHHCHHEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA